Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4417

Experiment: D-Mannose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose (C)
5,279,736	+				-0.1
5,279,737	-				-0.1
5,279,737	-				-0.9
5,279,739	-				+0.5
5,279,739	-				-0.4
5,279,795	-				-0.1
5,279,803	+				+0.5
5,279,803	+				-0.2
5,279,803	+				-0.1
5,279,803	+				+1.6
5,279,804	-				-0.5
5,279,804	-				-0.4
5,279,804	-				+0.7
5,279,866	+		Echvi_4415	0.18	-1.0
5,279,888	+		Echvi_4415	0.23	-0.5
5,279,941	+		Echvi_4415	0.33	-0.1
5,279,943	+		Echvi_4415	0.34	-0.2
5,280,112	-		Echvi_4415	0.67	-1.2
5,280,112	-		Echvi_4415	0.67	-1.2
5,280,152	+		Echvi_4415	0.75	-1.2
5,280,201	+		Echvi_4415	0.85	-0.3
5,280,243	+				+0.3
5,280,307	-				-0.1
5,280,309	-				+0.2
5,280,309	-				-0.2
5,280,309	-				-0.2
5,280,352	+				-0.3
5,280,355	+				-0.7
5,280,355	+				+0.5
5,280,355	+				+0.1
5,280,529	+		Echvi_4416	0.51	+0.9
5,280,529	+		Echvi_4416	0.51	+1.3
5,280,548	+		Echvi_4416	0.56	-0.9
5,280,548	+		Echvi_4416	0.56	-0.7
5,280,549	-		Echvi_4416	0.56	+0.5
5,280,643	+		Echvi_4416	0.82	-0.6
5,280,683	-				-0.7
5,280,684	+				+0.3
5,280,690	+				+0.3
5,280,691	-				-0.6
5,280,691	-				+0.1
5,280,694	+				-0.8
5,280,694	+				+0.3
5,280,694	+				-1.2
5,280,694	+				-0.0
5,280,695	-				+0.1
5,280,695	-				-0.6
5,280,695	-				-1.4
5,280,695	-				+0.1
5,280,695	-				-1.0
5,280,695	-				-0.2
5,280,695	-				-0.2
5,280,696	+				-0.4
5,280,697	-				-0.2
5,280,697	-				-0.2
5,280,697	-				+0.4
5,280,697	-				+1.0
5,280,699	+				-0.1
5,280,745	+				-1.0
5,280,747	+				+0.8
5,280,747	+				-1.0
5,280,748	-				-0.1
5,280,768	+				-1.0
5,280,784	+				+1.0
5,280,784	+				+1.7
5,280,787	-				-2.9
5,280,788	+				-0.3
5,280,789	-				-0.6
5,280,789	-				+0.6
5,280,789	-				+1.3
5,280,789	-				+0.8
5,280,789	-				+0.9
5,280,813	+				+0.1
5,280,832	-				+0.2
5,280,970	+		Echvi_4417	0.11	+0.6
5,280,970	+		Echvi_4417	0.11	+0.7
5,281,164	+		Echvi_4417	0.19	+0.7
5,281,165	-		Echvi_4417	0.19	-0.3
5,281,165	-		Echvi_4417	0.19	+0.2
5,281,203	+		Echvi_4417	0.20	+0.2
5,281,203	+		Echvi_4417	0.20	-1.7
5,281,203	+		Echvi_4417	0.20	+1.1
5,281,206	-		Echvi_4417	0.20	+0.5
5,281,267	-		Echvi_4417	0.23	-0.5
5,281,323	-		Echvi_4417	0.25	-0.7
5,281,325	+		Echvi_4417	0.25	-1.0
5,281,326	-		Echvi_4417	0.25	-0.1
5,281,387	-		Echvi_4417	0.28	-0.8
5,281,551	+		Echvi_4417	0.34	+0.4
5,281,556	+		Echvi_4417	0.35	-1.1
5,281,562	+		Echvi_4417	0.35	+1.8
5,281,732	+		Echvi_4417	0.42	-1.2
5,281,733	-		Echvi_4417	0.42	-0.1
5,281,793	+		Echvi_4417	0.44	+2.5
5,281,794	-		Echvi_4417	0.44	+0.6
5,281,938	-		Echvi_4417	0.50	+0.4
5,281,952	+		Echvi_4417	0.51	-0.2
5,281,961	+		Echvi_4417	0.51	+1.5
5,281,961	+		Echvi_4417	0.51	-1.2
5,281,961	+		Echvi_4417	0.51	+0.1
5,281,962	-		Echvi_4417	0.51	+0.0
5,281,962	-		Echvi_4417	0.51	-0.0
5,281,962	-		Echvi_4417	0.51	+0.6
5,281,962	-		Echvi_4417	0.51	+0.1
5,281,962	-		Echvi_4417	0.51	-2.4
5,281,962	-		Echvi_4417	0.51	+0.1
5,282,003	-		Echvi_4417	0.53	-0.6
5,282,003	-		Echvi_4417	0.53	-0.9
5,282,003	-		Echvi_4417	0.53	+0.6
5,282,029	+		Echvi_4417	0.54	-0.2
5,282,087	+		Echvi_4417	0.56	+0.5
5,282,142	+		Echvi_4417	0.59	+0.8
5,282,193	+		Echvi_4417	0.61	+1.6
5,282,194	-		Echvi_4417	0.61	-0.8
5,282,194	-		Echvi_4417	0.61	+0.3
5,282,195	+		Echvi_4417	0.61	-0.8
5,282,196	-		Echvi_4417	0.61	+0.2
5,282,206	-		Echvi_4417	0.61	+0.6
5,282,241	+		Echvi_4417	0.63	-0.3
5,282,313	+		Echvi_4417	0.66	-0.4
5,282,314	-		Echvi_4417	0.66	+0.8
5,282,547	+		Echvi_4417	0.75	+0.4
5,282,548	-		Echvi_4417	0.75	+0.5
5,282,548	-		Echvi_4417	0.75	-0.1
5,282,559	-		Echvi_4417	0.76	+0.7
5,282,582	+		Echvi_4417	0.77	-0.3
5,282,619	+		Echvi_4417	0.78	-0.5
5,282,620	-		Echvi_4417	0.78	+0.7
5,282,621	+		Echvi_4417	0.78	+0.3
5,282,621	+		Echvi_4417	0.78	+0.6
5,282,621	+		Echvi_4417	0.78	-0.7
5,282,621	+		Echvi_4417	0.78	+1.5
5,282,622	-		Echvi_4417	0.78	-1.6
5,282,622	-		Echvi_4417	0.78	-0.2
5,282,627	-		Echvi_4417	0.79	-1.7
5,282,627	-		Echvi_4417	0.79	-1.4
5,282,660	+		Echvi_4417	0.80	-0.8
5,282,660	+		Echvi_4417	0.80	+1.2
5,282,879	+		Echvi_4417	0.89	-0.9
5,282,879	+		Echvi_4417	0.89	-0.8
5,282,880	-		Echvi_4417	0.89	-0.2
5,282,880	-		Echvi_4417	0.89	-1.3
5,282,880	-		Echvi_4417	0.89	-0.1
5,282,880	-		Echvi_4417	0.89	+0.6
5,282,920	+				+0.1
5,282,920	+				+1.2
5,282,921	-				-0.7
5,283,038	+				+1.0
5,283,113	-				-0.2
5,283,118	-				+0.3
5,283,122	-				-0.5
5,283,170	+				-0.5
5,283,171	-				+0.6
5,283,171	-				-0.3
5,283,201	+				+0.6
5,283,202	-				-1.4
5,283,260	-				-0.2
5,283,260	-				+1.5
5,283,262	+				+0.9
5,283,262	+				-2.7
5,283,349	-				-0.7
5,283,394	+				-0.2
5,283,395	-				+0.1
5,283,497	+		Echvi_4418	0.25	-1.8
5,283,497	+		Echvi_4418	0.25	+0.6
5,283,497	+		Echvi_4418	0.25	-0.8
5,283,498	-		Echvi_4418	0.25	-1.7
5,283,503	+		Echvi_4418	0.26	+0.3
5,283,534	+		Echvi_4418	0.31	-0.5
5,283,534	+		Echvi_4418	0.31	+1.5
5,283,535	-		Echvi_4418	0.31	+0.4
5,283,584	+		Echvi_4418	0.40	+0.3
5,283,732	-		Echvi_4418	0.65	-0.8
5,283,771	+		Echvi_4418	0.72	+0.2
5,283,940	+				-1.8
5,284,005	+				-0.3
5,284,015	+				+0.7
5,284,110	+				+0.9