Experiment: D-Mannose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0568 and Echvi_0569 are separated by 50 nucleotides Echvi_0569 and Echvi_0570 are separated by 86 nucleotides
Echvi_0568: Echvi_0568 - hypothetical protein, at 647,633 to 647,890
_0568
Echvi_0569: Echvi_0569 - hypothetical protein, at 647,941 to 648,777
_0569
Echvi_0570: Echvi_0570 - hypothetical protein, at 648,864 to 650,018
_0570
Position (kb) 647
648
649 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 647.030 kb on - strand at 647.030 kb on - strand at 647.332 kb on + strand at 647.332 kb on + strand at 647.382 kb on + strand at 647.404 kb on + strand at 647.495 kb on + strand at 647.495 kb on + strand at 647.495 kb on + strand at 647.496 kb on - strand at 647.496 kb on - strand at 647.496 kb on - strand at 647.496 kb on - strand at 647.499 kb on + strand at 647.533 kb on - strand at 647.584 kb on + strand at 647.584 kb on + strand at 647.584 kb on + strand at 647.584 kb on + strand at 647.584 kb on + strand at 647.584 kb on + strand at 647.585 kb on - strand at 647.585 kb on - strand at 647.585 kb on - strand at 647.585 kb on - strand at 647.596 kb on + strand at 647.634 kb on + strand at 647.638 kb on + strand at 647.639 kb on - strand at 647.639 kb on - strand at 647.656 kb on + strand at 647.657 kb on - strand at 647.657 kb on - strand at 647.658 kb on + strand at 647.658 kb on + strand at 647.658 kb on + strand at 647.658 kb on + strand at 647.658 kb on + strand at 647.659 kb on - strand, within Echvi_0568 at 647.659 kb on - strand, within Echvi_0568 at 647.726 kb on - strand, within Echvi_0568 at 647.770 kb on + strand, within Echvi_0568 at 647.771 kb on - strand, within Echvi_0568 at 647.827 kb on + strand, within Echvi_0568 at 647.830 kb on - strand, within Echvi_0568 at 647.830 kb on - strand, within Echvi_0568 at 647.865 kb on + strand at 647.902 kb on - strand at 647.902 kb on - strand at 648.016 kb on - strand at 648.116 kb on - strand, within Echvi_0569 at 648.250 kb on - strand, within Echvi_0569 at 648.261 kb on - strand, within Echvi_0569 at 648.299 kb on - strand, within Echvi_0569 at 648.318 kb on + strand, within Echvi_0569 at 648.319 kb on - strand, within Echvi_0569 at 648.319 kb on - strand, within Echvi_0569 at 648.320 kb on + strand, within Echvi_0569 at 648.321 kb on - strand, within Echvi_0569 at 648.321 kb on - strand, within Echvi_0569 at 648.377 kb on + strand, within Echvi_0569 at 648.377 kb on + strand, within Echvi_0569 at 648.383 kb on + strand, within Echvi_0569 at 648.384 kb on - strand, within Echvi_0569 at 648.384 kb on - strand, within Echvi_0569 at 648.479 kb on - strand, within Echvi_0569 at 648.583 kb on - strand, within Echvi_0569 at 648.605 kb on + strand, within Echvi_0569 at 648.605 kb on + strand, within Echvi_0569 at 648.638 kb on + strand, within Echvi_0569 at 648.654 kb on - strand, within Echvi_0569 at 648.654 kb on - strand, within Echvi_0569 at 648.654 kb on - strand, within Echvi_0569 at 648.726 kb on + strand at 648.767 kb on - strand at 648.777 kb on + strand at 648.792 kb on + strand at 648.796 kb on + strand at 648.797 kb on - strand at 648.806 kb on + strand at 648.834 kb on + strand at 648.834 kb on + strand at 648.834 kb on + strand at 648.834 kb on + strand at 648.834 kb on + strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.835 kb on - strand at 648.842 kb on + strand at 648.889 kb on + strand at 648.890 kb on - strand at 648.890 kb on - strand at 648.935 kb on + strand at 648.935 kb on + strand at 648.936 kb on - strand at 648.944 kb on + strand at 648.954 kb on + strand at 648.954 kb on + strand at 648.954 kb on + strand at 648.955 kb on - strand at 648.955 kb on - strand at 648.968 kb on + strand at 648.969 kb on - strand at 648.969 kb on - strand at 649.070 kb on + strand, within Echvi_0570 at 649.095 kb on + strand, within Echvi_0570 at 649.105 kb on - strand, within Echvi_0570 at 649.105 kb on - strand, within Echvi_0570 at 649.141 kb on + strand, within Echvi_0570 at 649.142 kb on - strand, within Echvi_0570 at 649.195 kb on + strand, within Echvi_0570 at 649.196 kb on - strand, within Echvi_0570 at 649.268 kb on + strand, within Echvi_0570 at 649.272 kb on + strand, within Echvi_0570 at 649.288 kb on - strand, within Echvi_0570 at 649.319 kb on - strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.324 kb on + strand, within Echvi_0570 at 649.325 kb on - strand, within Echvi_0570 at 649.325 kb on - strand, within Echvi_0570 at 649.325 kb on - strand, within Echvi_0570 at 649.325 kb on - strand, within Echvi_0570 at 649.331 kb on + strand, within Echvi_0570 at 649.332 kb on - strand, within Echvi_0570 at 649.332 kb on - strand, within Echvi_0570 at 649.458 kb on - strand, within Echvi_0570 at 649.521 kb on - strand, within Echvi_0570 at 649.571 kb on - strand, within Echvi_0570 at 649.609 kb on + strand, within Echvi_0570 at 649.613 kb on + strand, within Echvi_0570 at 649.613 kb on + strand, within Echvi_0570 at 649.614 kb on - strand, within Echvi_0570 at 649.614 kb on - strand, within Echvi_0570 at 649.616 kb on + strand, within Echvi_0570 at 649.712 kb on + strand, within Echvi_0570 at 649.712 kb on + strand, within Echvi_0570 at 649.768 kb on - strand, within Echvi_0570 at 649.769 kb on + strand, within Echvi_0570 at 649.769 kb on + strand, within Echvi_0570 at 649.770 kb on - strand, within Echvi_0570 at 649.770 kb on - strand, within Echvi_0570
Per-strain Table
Position Strand Gene LocusTag Fraction D-Mannose (C) remove 647,030 - +0.5 647,030 - +0.5 647,332 + -1.4 647,332 + +0.0 647,382 + +1.0 647,404 + +1.5 647,495 + +0.4 647,495 + -0.7 647,495 + -1.2 647,496 - +0.1 647,496 - -1.8 647,496 - -1.1 647,496 - +0.2 647,499 + +0.4 647,533 - -1.6 647,584 + -2.0 647,584 + +1.2 647,584 + -0.2 647,584 + +0.2 647,584 + +0.7 647,584 + +0.9 647,585 - -0.8 647,585 - -0.8 647,585 - +0.2 647,585 - -0.9 647,596 + -0.2 647,634 + -0.9 647,638 + -0.5 647,639 - +1.3 647,639 - -0.4 647,656 + +0.0 647,657 - -0.2 647,657 - +0.5 647,658 + -1.5 647,658 + -0.2 647,658 + +3.0 647,658 + +1.3 647,658 + -0.1 647,659 - Echvi_0568 0.10 -0.1 647,659 - Echvi_0568 0.10 -1.3 647,726 - Echvi_0568 0.36 -0.5 647,770 + Echvi_0568 0.53 +0.4 647,771 - Echvi_0568 0.53 -1.3 647,827 + Echvi_0568 0.75 +0.7 647,830 - Echvi_0568 0.76 -0.2 647,830 - Echvi_0568 0.76 -1.6 647,865 + -0.1 647,902 - +0.8 647,902 - +0.4 648,016 - +0.1 648,116 - Echvi_0569 0.21 -0.1 648,250 - Echvi_0569 0.37 +0.1 648,261 - Echvi_0569 0.38 -0.3 648,299 - Echvi_0569 0.43 -0.3 648,318 + Echvi_0569 0.45 -1.1 648,319 - Echvi_0569 0.45 -1.2 648,319 - Echvi_0569 0.45 -0.3 648,320 + Echvi_0569 0.45 -2.6 648,321 - Echvi_0569 0.45 -1.7 648,321 - Echvi_0569 0.45 +0.6 648,377 + Echvi_0569 0.52 +1.7 648,377 + Echvi_0569 0.52 -1.6 648,383 + Echvi_0569 0.53 -0.7 648,384 - Echvi_0569 0.53 +0.0 648,384 - Echvi_0569 0.53 +0.7 648,479 - Echvi_0569 0.64 +0.0 648,583 - Echvi_0569 0.77 -1.5 648,605 + Echvi_0569 0.79 +1.2 648,605 + Echvi_0569 0.79 -1.0 648,638 + Echvi_0569 0.83 -0.6 648,654 - Echvi_0569 0.85 -0.4 648,654 - Echvi_0569 0.85 -1.0 648,654 - Echvi_0569 0.85 +0.2 648,726 + -1.6 648,767 - +0.4 648,777 + +0.8 648,792 + -1.2 648,796 + -0.8 648,797 - -0.2 648,806 + +0.6 648,834 + +0.5 648,834 + -0.5 648,834 + +0.3 648,834 + -0.0 648,834 + +0.6 648,835 - -0.9 648,835 - -0.3 648,835 - -1.7 648,835 - -2.5 648,835 - -2.2 648,835 - +0.0 648,835 - +0.7 648,842 + -0.4 648,889 + +1.7 648,890 - -0.3 648,890 - -1.6 648,935 + -1.3 648,935 + +0.2 648,936 - +0.4 648,944 + +1.2 648,954 + -1.6 648,954 + -0.2 648,954 + -0.7 648,955 - +0.2 648,955 - -2.8 648,968 + +1.8 648,969 - +1.4 648,969 - -1.1 649,070 + Echvi_0570 0.18 +1.0 649,095 + Echvi_0570 0.20 -0.7 649,105 - Echvi_0570 0.21 +0.2 649,105 - Echvi_0570 0.21 -0.2 649,141 + Echvi_0570 0.24 +1.0 649,142 - Echvi_0570 0.24 -0.3 649,195 + Echvi_0570 0.29 +0.2 649,196 - Echvi_0570 0.29 -0.1 649,268 + Echvi_0570 0.35 -1.9 649,272 + Echvi_0570 0.35 +0.2 649,288 - Echvi_0570 0.37 +0.7 649,319 - Echvi_0570 0.39 -2.0 649,324 + Echvi_0570 0.40 -0.9 649,324 + Echvi_0570 0.40 +0.6 649,324 + Echvi_0570 0.40 -1.2 649,324 + Echvi_0570 0.40 +0.2 649,324 + Echvi_0570 0.40 -0.4 649,325 - Echvi_0570 0.40 -0.5 649,325 - Echvi_0570 0.40 +3.1 649,325 - Echvi_0570 0.40 -0.6 649,325 - Echvi_0570 0.40 -0.7 649,331 + Echvi_0570 0.40 +0.4 649,332 - Echvi_0570 0.41 +0.6 649,332 - Echvi_0570 0.41 -0.6 649,458 - Echvi_0570 0.51 -1.5 649,521 - Echvi_0570 0.57 -0.2 649,571 - Echvi_0570 0.61 +0.4 649,609 + Echvi_0570 0.65 +1.3 649,613 + Echvi_0570 0.65 -1.0 649,613 + Echvi_0570 0.65 +0.1 649,614 - Echvi_0570 0.65 -1.0 649,614 - Echvi_0570 0.65 -0.3 649,616 + Echvi_0570 0.65 -0.4 649,712 + Echvi_0570 0.73 -0.8 649,712 + Echvi_0570 0.73 -0.2 649,768 - Echvi_0570 0.78 +3.3 649,769 + Echvi_0570 0.78 -0.7 649,769 + Echvi_0570 0.78 +0.8 649,770 - Echvi_0570 0.78 -0.4 649,770 - Echvi_0570 0.78 -1.0
Or see this region's nucleotide sequence