Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_18810

Experiment: m.b. benzoic 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_18800 and CA264_18805 are separated by 82 nucleotidesCA264_18805 and CA264_18810 are separated by 14 nucleotidesCA264_18810 and CA264_18815 are separated by 23 nucleotides CA264_18800: CA264_18800 - DNA repair protein RecO, at 4,365,773 to 4,366,486 _18800 CA264_18805: CA264_18805 - hypothetical protein, at 4,366,569 to 4,367,081 _18805 CA264_18810: CA264_18810 - hypothetical protein, at 4,367,096 to 4,368,058 _18810 CA264_18815: CA264_18815 - DHH family phosphoesterase, at 4,368,082 to 4,369,104 _18815 Position (kb) 4367 4368 4369Strain fitness (log2 ratio) -1 0 1 2at 4366.555 kb on + strandat 4366.571 kb on - strandat 4366.723 kb on - strand, within CA264_18805at 4366.734 kb on - strand, within CA264_18805at 4366.734 kb on - strand, within CA264_18805at 4366.734 kb on - strand, within CA264_18805at 4366.737 kb on + strand, within CA264_18805at 4366.738 kb on - strand, within CA264_18805at 4366.778 kb on - strand, within CA264_18805at 4366.825 kb on - strand, within CA264_18805at 4366.825 kb on - strand, within CA264_18805at 4366.862 kb on + strand, within CA264_18805at 4366.882 kb on + strand, within CA264_18805at 4366.919 kb on + strand, within CA264_18805at 4367.071 kb on + strandat 4367.071 kb on + strandat 4367.072 kb on - strandat 4367.072 kb on - strandat 4367.093 kb on + strandat 4367.094 kb on - strandat 4367.094 kb on - strandat 4367.141 kb on - strandat 4367.361 kb on + strand, within CA264_18810at 4367.361 kb on + strand, within CA264_18810at 4367.366 kb on + strand, within CA264_18810at 4367.366 kb on + strand, within CA264_18810at 4367.417 kb on + strand, within CA264_18810at 4367.425 kb on - strand, within CA264_18810at 4367.479 kb on - strand, within CA264_18810at 4367.479 kb on - strand, within CA264_18810at 4367.608 kb on + strand, within CA264_18810at 4367.838 kb on + strand, within CA264_18810at 4367.855 kb on + strand, within CA264_18810at 4367.856 kb on - strand, within CA264_18810at 4367.881 kb on + strand, within CA264_18810at 4367.948 kb on - strand, within CA264_18810at 4367.968 kb on + strandat 4367.973 kb on + strandat 4368.049 kb on + strandat 4368.049 kb on + strandat 4368.049 kb on + strandat 4368.060 kb on + strandat 4368.060 kb on + strandat 4368.060 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml
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4,366,555 + -0.0
4,366,571 - +0.3
4,366,723 - CA264_18805 0.30 +0.6
4,366,734 - CA264_18805 0.32 -0.2
4,366,734 - CA264_18805 0.32 -0.6
4,366,734 - CA264_18805 0.32 -1.2
4,366,737 + CA264_18805 0.33 +0.9
4,366,738 - CA264_18805 0.33 +0.3
4,366,778 - CA264_18805 0.41 -0.5
4,366,825 - CA264_18805 0.50 -1.0
4,366,825 - CA264_18805 0.50 -0.4
4,366,862 + CA264_18805 0.57 -0.4
4,366,882 + CA264_18805 0.61 +2.0
4,366,919 + CA264_18805 0.68 +1.1
4,367,071 + +0.5
4,367,071 + -0.5
4,367,072 - -0.0
4,367,072 - -0.9
4,367,093 + +0.6
4,367,094 - +0.7
4,367,094 - +0.2
4,367,141 - +0.4
4,367,361 + CA264_18810 0.28 +0.0
4,367,361 + CA264_18810 0.28 -0.4
4,367,366 + CA264_18810 0.28 -0.1
4,367,366 + CA264_18810 0.28 -0.5
4,367,417 + CA264_18810 0.33 +1.7
4,367,425 - CA264_18810 0.34 +0.2
4,367,479 - CA264_18810 0.40 +0.7
4,367,479 - CA264_18810 0.40 +0.6
4,367,608 + CA264_18810 0.53 -0.5
4,367,838 + CA264_18810 0.77 +0.1
4,367,855 + CA264_18810 0.79 -0.3
4,367,856 - CA264_18810 0.79 -0.9
4,367,881 + CA264_18810 0.82 -0.1
4,367,948 - CA264_18810 0.88 +0.6
4,367,968 + +0.1
4,367,973 + +2.2
4,368,049 + -0.7
4,368,049 + -1.3
4,368,049 + -0.1
4,368,060 + +0.1
4,368,060 + +0.6
4,368,060 + +0.8

Or see this region's nucleotide sequence