Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_17450

Experiment: m.b. benzoic 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_17445 and CA264_17450 are separated by 992 nucleotidesCA264_17450 and CA264_17455 are separated by 61 nucleotides CA264_17445: CA264_17445 - peptidase M28, at 4,065,053 to 4,066,435 _17445 CA264_17450: CA264_17450 - acyl-CoA thioesterase, at 4,067,428 to 4,067,985 _17450 CA264_17455: CA264_17455 - hypothetical protein, at 4,068,047 to 4,069,420 _17455 Position (kb) 4067 4068Strain fitness (log2 ratio) -2 -1 0 1 2 3at 4066.435 kb on + strandat 4066.435 kb on + strandat 4066.435 kb on + strandat 4066.435 kb on + strandat 4066.435 kb on + strandat 4066.435 kb on + strandat 4066.435 kb on + strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.436 kb on - strandat 4066.440 kb on - strandat 4066.440 kb on - strandat 4066.445 kb on + strandat 4066.446 kb on - strandat 4066.452 kb on + strandat 4066.472 kb on - strandat 4066.492 kb on - strandat 4066.500 kb on + strandat 4066.517 kb on - strandat 4066.621 kb on + strandat 4066.621 kb on + strandat 4066.622 kb on - strandat 4066.622 kb on - strandat 4066.712 kb on + strandat 4066.712 kb on + strandat 4066.712 kb on + strandat 4066.716 kb on + strandat 4066.716 kb on + strandat 4066.717 kb on - strandat 4066.766 kb on + strandat 4066.779 kb on + strandat 4066.781 kb on + strandat 4066.781 kb on + strandat 4066.787 kb on - strandat 4066.851 kb on - strandat 4066.851 kb on - strandat 4066.851 kb on - strandat 4066.852 kb on + strandat 4066.853 kb on - strandat 4066.853 kb on - strandat 4066.926 kb on - strandat 4066.926 kb on - strandat 4066.932 kb on + strandat 4066.950 kb on - strandat 4066.961 kb on - strandat 4066.993 kb on + strandat 4066.994 kb on - strandat 4066.994 kb on - strandat 4066.994 kb on - strandat 4066.994 kb on - strandat 4067.006 kb on + strandat 4067.007 kb on - strandat 4067.009 kb on - strandat 4067.009 kb on - strandat 4067.011 kb on + strandat 4067.011 kb on + strandat 4067.012 kb on - strandat 4067.012 kb on - strandat 4067.012 kb on - strandat 4067.089 kb on + strandat 4067.089 kb on + strandat 4067.089 kb on + strandat 4067.090 kb on - strandat 4067.274 kb on - strandat 4067.316 kb on - strandat 4067.554 kb on + strand, within CA264_17450at 4067.588 kb on - strand, within CA264_17450at 4067.588 kb on - strand, within CA264_17450at 4067.588 kb on - strand, within CA264_17450at 4067.640 kb on + strand, within CA264_17450at 4067.645 kb on + strand, within CA264_17450at 4067.645 kb on + strand, within CA264_17450at 4067.646 kb on - strand, within CA264_17450at 4067.665 kb on + strand, within CA264_17450at 4067.738 kb on - strand, within CA264_17450at 4067.820 kb on - strand, within CA264_17450at 4067.875 kb on + strand, within CA264_17450at 4067.876 kb on - strand, within CA264_17450at 4067.913 kb on - strand, within CA264_17450at 4067.913 kb on - strand, within CA264_17450at 4067.951 kb on + strandat 4067.990 kb on + strandat 4067.990 kb on + strandat 4067.990 kb on + strandat 4067.996 kb on + strandat 4067.997 kb on - strandat 4068.001 kb on + strandat 4068.002 kb on - strandat 4068.010 kb on + strandat 4068.010 kb on + strandat 4068.010 kb on + strandat 4068.010 kb on + strandat 4068.011 kb on - strandat 4068.062 kb on + strandat 4068.062 kb on + strandat 4068.062 kb on + strandat 4068.113 kb on + strandat 4068.202 kb on + strand, within CA264_17455at 4068.315 kb on - strand, within CA264_17455at 4068.325 kb on - strand, within CA264_17455at 4068.356 kb on - strand, within CA264_17455at 4068.361 kb on + strand, within CA264_17455at 4068.362 kb on - strand, within CA264_17455at 4068.362 kb on - strand, within CA264_17455at 4068.362 kb on - strand, within CA264_17455at 4068.362 kb on - strand, within CA264_17455at 4068.363 kb on + strand, within CA264_17455at 4068.364 kb on - strand, within CA264_17455at 4068.364 kb on - strand, within CA264_17455at 4068.364 kb on - strand, within CA264_17455at 4068.364 kb on - strand, within CA264_17455at 4068.366 kb on + strand, within CA264_17455at 4068.366 kb on + strand, within CA264_17455at 4068.367 kb on - strand, within CA264_17455at 4068.367 kb on - strand, within CA264_17455at 4068.385 kb on - strand, within CA264_17455at 4068.400 kb on - strand, within CA264_17455at 4068.405 kb on + strand, within CA264_17455at 4068.405 kb on + strand, within CA264_17455at 4068.406 kb on - strand, within CA264_17455at 4068.420 kb on + strand, within CA264_17455at 4068.420 kb on + strand, within CA264_17455at 4068.421 kb on - strand, within CA264_17455at 4068.421 kb on - strand, within CA264_17455at 4068.485 kb on + strand, within CA264_17455at 4068.485 kb on + strand, within CA264_17455at 4068.485 kb on + strand, within CA264_17455at 4068.486 kb on - strand, within CA264_17455at 4068.570 kb on + strand, within CA264_17455at 4068.570 kb on + strand, within CA264_17455at 4068.571 kb on - strand, within CA264_17455at 4068.571 kb on - strand, within CA264_17455at 4068.651 kb on - strand, within CA264_17455at 4068.651 kb on - strand, within CA264_17455at 4068.651 kb on - strand, within CA264_17455at 4068.694 kb on + strand, within CA264_17455at 4068.729 kb on + strand, within CA264_17455at 4068.730 kb on - strand, within CA264_17455at 4068.828 kb on + strand, within CA264_17455at 4068.828 kb on + strand, within CA264_17455at 4068.900 kb on + strand, within CA264_17455

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml
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4,066,435 + +0.6
4,066,435 + +0.3
4,066,435 + -0.4
4,066,435 + +0.4
4,066,435 + -0.1
4,066,435 + +0.3
4,066,435 + -0.2
4,066,436 - +0.2
4,066,436 - -0.7
4,066,436 - +1.6
4,066,436 - +0.7
4,066,436 - +1.2
4,066,436 - +2.1
4,066,436 - +0.3
4,066,436 - -0.5
4,066,436 - -1.6
4,066,436 - +0.1
4,066,440 - +2.3
4,066,440 - -0.3
4,066,445 + +0.3
4,066,446 - -1.0
4,066,452 + -0.9
4,066,472 - +0.3
4,066,492 - -0.5
4,066,500 + -1.3
4,066,517 - -1.9
4,066,621 + -0.2
4,066,621 + +1.3
4,066,622 - +0.3
4,066,622 - +1.2
4,066,712 + -0.7
4,066,712 + +0.3
4,066,712 + +0.2
4,066,716 + +0.8
4,066,716 + -0.5
4,066,717 - -0.4
4,066,766 + +2.3
4,066,779 + +0.3
4,066,781 + -1.3
4,066,781 + +1.1
4,066,787 - +2.9
4,066,851 - -0.1
4,066,851 - -0.0
4,066,851 - +0.2
4,066,852 + +0.3
4,066,853 - +0.1
4,066,853 - +1.3
4,066,926 - +2.3
4,066,926 - +0.6
4,066,932 + +0.7
4,066,950 - -0.7
4,066,961 - +0.9
4,066,993 + -0.5
4,066,994 - +1.9
4,066,994 - -0.4
4,066,994 - +1.3
4,066,994 - +0.1
4,067,006 + +0.1
4,067,007 - -0.2
4,067,009 - -0.2
4,067,009 - +0.8
4,067,011 + +1.6
4,067,011 + +0.2
4,067,012 - +0.8
4,067,012 - -1.1
4,067,012 - +0.0
4,067,089 + +0.2
4,067,089 + +0.3
4,067,089 + +0.4
4,067,090 - +0.8
4,067,274 - +0.3
4,067,316 - +0.7
4,067,554 + CA264_17450 0.23 +0.0
4,067,588 - CA264_17450 0.29 +0.3
4,067,588 - CA264_17450 0.29 -0.4
4,067,588 - CA264_17450 0.29 +0.3
4,067,640 + CA264_17450 0.38 -0.7
4,067,645 + CA264_17450 0.39 -0.2
4,067,645 + CA264_17450 0.39 -0.7
4,067,646 - CA264_17450 0.39 -2.3
4,067,665 + CA264_17450 0.42 +1.0
4,067,738 - CA264_17450 0.56 +0.6
4,067,820 - CA264_17450 0.70 +1.0
4,067,875 + CA264_17450 0.80 +1.9
4,067,876 - CA264_17450 0.80 +0.3
4,067,913 - CA264_17450 0.87 +0.8
4,067,913 - CA264_17450 0.87 -0.5
4,067,951 + -0.5
4,067,990 + -0.3
4,067,990 + -0.8
4,067,990 + +0.3
4,067,996 + +0.7
4,067,997 - +0.3
4,068,001 + -0.7
4,068,002 - -0.0
4,068,010 + +0.2
4,068,010 + +0.4
4,068,010 + +0.6
4,068,010 + -0.8
4,068,011 - +0.3
4,068,062 + -0.8
4,068,062 + +0.8
4,068,062 + -0.3
4,068,113 + +0.1
4,068,202 + CA264_17455 0.11 -1.3
4,068,315 - CA264_17455 0.20 +0.4
4,068,325 - CA264_17455 0.20 -1.5
4,068,356 - CA264_17455 0.22 -0.7
4,068,361 + CA264_17455 0.23 -0.3
4,068,362 - CA264_17455 0.23 -0.1
4,068,362 - CA264_17455 0.23 -0.5
4,068,362 - CA264_17455 0.23 -0.4
4,068,362 - CA264_17455 0.23 +0.1
4,068,363 + CA264_17455 0.23 +1.0
4,068,364 - CA264_17455 0.23 -0.9
4,068,364 - CA264_17455 0.23 -0.3
4,068,364 - CA264_17455 0.23 -0.1
4,068,364 - CA264_17455 0.23 -0.8
4,068,366 + CA264_17455 0.23 +0.8
4,068,366 + CA264_17455 0.23 +0.8
4,068,367 - CA264_17455 0.23 -0.0
4,068,367 - CA264_17455 0.23 -0.7
4,068,385 - CA264_17455 0.25 -0.7
4,068,400 - CA264_17455 0.26 -0.9
4,068,405 + CA264_17455 0.26 +0.9
4,068,405 + CA264_17455 0.26 +0.3
4,068,406 - CA264_17455 0.26 +0.2
4,068,420 + CA264_17455 0.27 +0.1
4,068,420 + CA264_17455 0.27 +1.3
4,068,421 - CA264_17455 0.27 +0.2
4,068,421 - CA264_17455 0.27 -0.4
4,068,485 + CA264_17455 0.32 -0.6
4,068,485 + CA264_17455 0.32 +1.3
4,068,485 + CA264_17455 0.32 +1.3
4,068,486 - CA264_17455 0.32 +0.6
4,068,570 + CA264_17455 0.38 +1.5
4,068,570 + CA264_17455 0.38 +1.1
4,068,571 - CA264_17455 0.38 -0.1
4,068,571 - CA264_17455 0.38 -0.3
4,068,651 - CA264_17455 0.44 -0.0
4,068,651 - CA264_17455 0.44 +0.1
4,068,651 - CA264_17455 0.44 -0.1
4,068,694 + CA264_17455 0.47 -0.2
4,068,729 + CA264_17455 0.50 +1.7
4,068,730 - CA264_17455 0.50 -0.6
4,068,828 + CA264_17455 0.57 -0.7
4,068,828 + CA264_17455 0.57 -0.1
4,068,900 + CA264_17455 0.62 -0.5

Or see this region's nucleotide sequence