Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_15130

Experiment: m.b. benzoic 0.4 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntCA264_15130 and CA264_15135 are separated by 104 nucleotidesCA264_15135 and CA264_15140 are separated by 93 nucleotides CA264_15130: CA264_15130 - ferrochelatase, at 3,548,870 to 3,549,898 _15130 CA264_15135: CA264_15135 - TIGR00730 family Rossman fold protein, at 3,550,003 to 3,550,584 _15135 CA264_15140: CA264_15140 - cysteine desulfurase, at 3,550,678 to 3,551,820 _15140 Position (kb) 3548 3549 3550Strain fitness (log2 ratio) -2 -1 0 1 2at 3547.921 kb on + strandat 3548.112 kb on + strandat 3548.112 kb on + strandat 3548.112 kb on + strandat 3548.112 kb on + strandat 3548.112 kb on + strandat 3548.118 kb on + strandat 3548.122 kb on + strandat 3548.122 kb on + strandat 3548.194 kb on + strandat 3548.196 kb on + strandat 3548.196 kb on + strandat 3548.196 kb on + strandat 3548.204 kb on + strandat 3548.214 kb on + strandat 3548.259 kb on + strandat 3548.260 kb on - strandat 3548.292 kb on + strandat 3548.292 kb on + strandat 3548.493 kb on + strandat 3548.518 kb on - strandat 3548.575 kb on + strandat 3548.576 kb on - strandat 3548.591 kb on + strandat 3548.600 kb on + strandat 3548.606 kb on - strandat 3548.616 kb on + strandat 3548.654 kb on + strandat 3548.680 kb on - strandat 3548.698 kb on + strandat 3548.699 kb on - strandat 3548.705 kb on - strandat 3548.705 kb on - strandat 3548.709 kb on + strandat 3548.709 kb on + strandat 3548.710 kb on - strandat 3548.710 kb on - strandat 3548.710 kb on - strandat 3548.716 kb on + strandat 3548.740 kb on - strandat 3548.762 kb on + strandat 3548.762 kb on + strandat 3548.762 kb on + strandat 3548.802 kb on - strandat 3548.802 kb on - strandat 3548.805 kb on + strandat 3548.805 kb on + strandat 3548.805 kb on + strandat 3548.830 kb on + strandat 3548.830 kb on + strandat 3548.831 kb on - strandat 3548.834 kb on + strandat 3548.835 kb on - strandat 3548.837 kb on + strandat 3548.838 kb on - strandat 3548.860 kb on + strandat 3548.861 kb on - strandat 3548.861 kb on - strandat 3548.861 kb on - strandat 3548.864 kb on + strandat 3549.896 kb on + strandat 3549.896 kb on + strandat 3549.897 kb on - strandat 3549.897 kb on - strandat 3549.960 kb on + strandat 3549.961 kb on - strandat 3549.983 kb on + strandat 3550.004 kb on + strandat 3550.005 kb on - strandat 3550.049 kb on + strandat 3550.057 kb on + strandat 3550.095 kb on + strand, within CA264_15135at 3550.172 kb on + strand, within CA264_15135at 3550.181 kb on + strand, within CA264_15135at 3550.181 kb on - strand, within CA264_15135at 3550.234 kb on - strand, within CA264_15135at 3550.243 kb on + strand, within CA264_15135at 3550.244 kb on - strand, within CA264_15135at 3550.333 kb on + strand, within CA264_15135at 3550.484 kb on - strand, within CA264_15135at 3550.532 kb on + strandat 3550.532 kb on + strandat 3550.574 kb on - strandat 3550.576 kb on - strandat 3550.650 kb on + strandat 3550.650 kb on + strandat 3550.659 kb on + strandat 3550.659 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml
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3,547,921 + +0.5
3,548,112 + -1.4
3,548,112 + -1.3
3,548,112 + +0.0
3,548,112 + -1.2
3,548,112 + -0.1
3,548,118 + +1.2
3,548,122 + +0.5
3,548,122 + +1.2
3,548,194 + -0.8
3,548,196 + -0.4
3,548,196 + -0.6
3,548,196 + -1.3
3,548,204 + -0.1
3,548,214 + -0.1
3,548,259 + +1.2
3,548,260 - +0.2
3,548,292 + -0.0
3,548,292 + +0.7
3,548,493 + -0.2
3,548,518 - +2.2
3,548,575 + -0.1
3,548,576 - -0.2
3,548,591 + -1.6
3,548,600 + +0.4
3,548,606 - +0.0
3,548,616 + -1.0
3,548,654 + -1.4
3,548,680 - -0.3
3,548,698 + +0.4
3,548,699 - -1.4
3,548,705 - +1.4
3,548,705 - +0.6
3,548,709 + -0.8
3,548,709 + -1.8
3,548,710 - +0.9
3,548,710 - -0.1
3,548,710 - +0.4
3,548,716 + +1.2
3,548,740 - -0.2
3,548,762 + +0.6
3,548,762 + -0.8
3,548,762 + +0.6
3,548,802 - -1.4
3,548,802 - +0.1
3,548,805 + -0.8
3,548,805 + +0.8
3,548,805 + +0.2
3,548,830 + -1.4
3,548,830 + -0.5
3,548,831 - +0.3
3,548,834 + +0.2
3,548,835 - -1.4
3,548,837 + +0.4
3,548,838 - +0.6
3,548,860 + +0.0
3,548,861 - -0.1
3,548,861 - -1.2
3,548,861 - +0.1
3,548,864 + -0.8
3,549,896 + -0.1
3,549,896 + +1.0
3,549,897 - +0.8
3,549,897 - +0.6
3,549,960 + -0.1
3,549,961 - -0.2
3,549,983 + +0.3
3,550,004 + -0.2
3,550,005 - +1.8
3,550,049 + +0.4
3,550,057 + +0.4
3,550,095 + CA264_15135 0.16 +1.4
3,550,172 + CA264_15135 0.29 +0.5
3,550,181 + CA264_15135 0.31 +0.5
3,550,181 - CA264_15135 0.31 +0.4
3,550,234 - CA264_15135 0.40 +1.8
3,550,243 + CA264_15135 0.41 +0.2
3,550,244 - CA264_15135 0.41 -0.6
3,550,333 + CA264_15135 0.57 -0.7
3,550,484 - CA264_15135 0.83 +1.1
3,550,532 + -0.1
3,550,532 + -0.2
3,550,574 - -0.8
3,550,576 - -0.4
3,550,650 + -0.8
3,550,650 + -0.4
3,550,659 + -0.4
3,550,659 + +0.5

Or see this region's nucleotide sequence