Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13375 and CA264_13380 are separated by 21 nucleotides CA264_13380 and CA264_13385 are separated by 128 nucleotides CA264_13385 and CA264_13390 are separated by 93 nucleotides
CA264_13375: CA264_13375 - GTPase Obg, at 3,119,134 to 3,120,126
_13375
CA264_13380: CA264_13380 - adenylate kinase, at 3,120,148 to 3,120,744
_13380
CA264_13385: CA264_13385 - hypoxanthine phosphoribosyltransferase, at 3,120,873 to 3,121,415
_13385
CA264_13390: CA264_13390 - sodium-translocating pyrophosphatase, at 3,121,509 to 3,123,773
_13390
Position (kb)
3120
3121
3122 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3120.772 kb on + strand at 3120.772 kb on + strand at 3120.773 kb on - strand at 3120.775 kb on - strand at 3120.775 kb on - strand at 3120.775 kb on - strand at 3120.780 kb on + strand at 3120.780 kb on + strand at 3120.791 kb on + strand at 3120.823 kb on - strand at 3120.922 kb on + strand at 3120.974 kb on - strand, within CA264_13385 at 3120.974 kb on - strand, within CA264_13385 at 3120.985 kb on - strand, within CA264_13385 at 3121.065 kb on + strand, within CA264_13385 at 3121.066 kb on - strand, within CA264_13385 at 3121.260 kb on - strand, within CA264_13385 at 3121.332 kb on + strand, within CA264_13385 at 3121.369 kb on + strand at 3121.377 kb on - strand at 3121.417 kb on + strand at 3121.418 kb on - strand at 3121.424 kb on + strand at 3121.428 kb on + strand at 3121.429 kb on - strand at 3121.437 kb on + strand at 3121.437 kb on + strand at 3121.445 kb on + strand at 3121.449 kb on + strand at 3121.490 kb on + strand at 3121.495 kb on + strand at 3121.558 kb on - strand at 3121.558 kb on - strand at 3121.559 kb on + strand at 3121.559 kb on + strand at 3121.905 kb on + strand, within CA264_13390 at 3121.956 kb on + strand, within CA264_13390 at 3121.957 kb on - strand, within CA264_13390 at 3122.091 kb on - strand, within CA264_13390 at 3122.233 kb on + strand, within CA264_13390 at 3122.233 kb on + strand, within CA264_13390
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 3,120,772 + +1.5 3,120,772 + -0.7 3,120,773 - +0.6 3,120,775 - +0.3 3,120,775 - +0.6 3,120,775 - +0.1 3,120,780 + -0.2 3,120,780 + +0.4 3,120,791 + +0.3 3,120,823 - -1.0 3,120,922 + +0.2 3,120,974 - CA264_13385 0.19 -0.5 3,120,974 - CA264_13385 0.19 -0.4 3,120,985 - CA264_13385 0.21 -1.0 3,121,065 + CA264_13385 0.35 -0.1 3,121,066 - CA264_13385 0.36 -1.3 3,121,260 - CA264_13385 0.71 -0.4 3,121,332 + CA264_13385 0.85 +0.7 3,121,369 + +1.2 3,121,377 - -0.3 3,121,417 + +0.8 3,121,418 - +0.1 3,121,424 + -0.0 3,121,428 + +1.5 3,121,429 - -0.9 3,121,437 + +0.5 3,121,437 + +3.0 3,121,445 + -0.6 3,121,449 + +0.3 3,121,490 + +0.0 3,121,495 + +0.4 3,121,558 - -0.1 3,121,558 - +1.6 3,121,559 + -0.8 3,121,559 + +2.0 3,121,905 + CA264_13390 0.17 -0.3 3,121,956 + CA264_13390 0.20 -0.3 3,121,957 - CA264_13390 0.20 +0.8 3,122,091 - CA264_13390 0.26 +0.8 3,122,233 + CA264_13390 0.32 +0.3 3,122,233 + CA264_13390 0.32 -1.1
Or see this region's nucleotide sequence