Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13050 and CA264_13055 are separated by 328 nucleotides CA264_13055 and CA264_13060 are separated by 388 nucleotides CA264_13060 and CA264_13065 are separated by 117 nucleotides
CA264_13050: CA264_13050 - hypothetical protein, at 3,041,709 to 3,042,986
_13050
CA264_13055: CA264_13055 - alpha-glucosidase, at 3,043,315 to 3,045,450
_13055
CA264_13060: CA264_13060 - tRNA-Ser, at 3,045,839 to 3,045,926
_13060
CA264_13065: CA264_13065 - DUF4153 domain-containing protein, at 3,046,044 to 3,047,912
_13065
Position (kb)
3043
3044
3045
3046 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3042.319 kb on + strand, within CA264_13050 at 3042.411 kb on - strand, within CA264_13050 at 3042.411 kb on - strand, within CA264_13050 at 3042.423 kb on - strand, within CA264_13050 at 3042.452 kb on + strand, within CA264_13050 at 3042.452 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.454 kb on + strand, within CA264_13050 at 3042.552 kb on + strand, within CA264_13050 at 3042.553 kb on - strand, within CA264_13050 at 3042.638 kb on - strand, within CA264_13050 at 3042.639 kb on + strand, within CA264_13050 at 3042.640 kb on - strand, within CA264_13050 at 3042.679 kb on - strand, within CA264_13050 at 3042.726 kb on - strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.808 kb on + strand, within CA264_13050 at 3042.809 kb on - strand, within CA264_13050 at 3042.812 kb on + strand, within CA264_13050 at 3042.813 kb on - strand, within CA264_13050 at 3042.813 kb on - strand, within CA264_13050 at 3042.813 kb on - strand, within CA264_13050 at 3042.839 kb on + strand, within CA264_13050 at 3042.985 kb on - strand at 3042.985 kb on - strand at 3043.155 kb on + strand at 3043.195 kb on + strand at 3043.195 kb on + strand at 3043.244 kb on - strand at 3043.244 kb on - strand at 3043.362 kb on + strand at 3043.366 kb on + strand at 3043.366 kb on + strand at 3043.366 kb on + strand at 3043.414 kb on - strand at 3043.443 kb on - strand at 3043.443 kb on - strand at 3043.487 kb on + strand at 3043.488 kb on - strand at 3043.502 kb on + strand at 3043.574 kb on - strand, within CA264_13055 at 3043.577 kb on + strand, within CA264_13055 at 3043.578 kb on - strand, within CA264_13055 at 3043.578 kb on - strand, within CA264_13055 at 3043.616 kb on - strand, within CA264_13055 at 3043.620 kb on - strand, within CA264_13055 at 3043.647 kb on - strand, within CA264_13055 at 3043.650 kb on + strand, within CA264_13055 at 3043.650 kb on + strand, within CA264_13055 at 3043.651 kb on - strand, within CA264_13055 at 3043.651 kb on - strand, within CA264_13055 at 3043.709 kb on + strand, within CA264_13055 at 3043.710 kb on - strand, within CA264_13055 at 3043.710 kb on - strand, within CA264_13055 at 3043.710 kb on - strand, within CA264_13055 at 3043.748 kb on + strand, within CA264_13055 at 3043.748 kb on + strand, within CA264_13055 at 3043.749 kb on - strand, within CA264_13055 at 3043.756 kb on + strand, within CA264_13055 at 3043.757 kb on - strand, within CA264_13055 at 3043.760 kb on + strand, within CA264_13055 at 3043.760 kb on + strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.761 kb on - strand, within CA264_13055 at 3043.763 kb on + strand, within CA264_13055 at 3043.764 kb on - strand, within CA264_13055 at 3043.788 kb on + strand, within CA264_13055 at 3043.814 kb on + strand, within CA264_13055 at 3043.817 kb on + strand, within CA264_13055 at 3043.818 kb on - strand, within CA264_13055 at 3043.849 kb on - strand, within CA264_13055 at 3043.850 kb on + strand, within CA264_13055 at 3043.850 kb on + strand, within CA264_13055 at 3043.851 kb on - strand, within CA264_13055 at 3043.971 kb on - strand, within CA264_13055 at 3044.019 kb on + strand, within CA264_13055 at 3044.027 kb on + strand, within CA264_13055 at 3044.053 kb on + strand, within CA264_13055 at 3044.054 kb on - strand, within CA264_13055 at 3044.054 kb on - strand, within CA264_13055 at 3044.058 kb on - strand, within CA264_13055 at 3044.117 kb on + strand, within CA264_13055 at 3044.118 kb on - strand, within CA264_13055 at 3044.118 kb on - strand, within CA264_13055 at 3044.186 kb on + strand, within CA264_13055 at 3044.186 kb on + strand, within CA264_13055 at 3044.473 kb on + strand, within CA264_13055 at 3044.492 kb on + strand, within CA264_13055 at 3044.516 kb on - strand, within CA264_13055 at 3044.620 kb on + strand, within CA264_13055 at 3044.620 kb on + strand, within CA264_13055 at 3044.621 kb on - strand, within CA264_13055 at 3044.621 kb on - strand, within CA264_13055 at 3044.621 kb on - strand, within CA264_13055 at 3044.730 kb on + strand, within CA264_13055 at 3044.730 kb on + strand, within CA264_13055 at 3044.731 kb on - strand, within CA264_13055 at 3044.731 kb on - strand, within CA264_13055 at 3044.736 kb on + strand at 3044.737 kb on - strand, within CA264_13055 at 3044.801 kb on + strand, within CA264_13055 at 3044.801 kb on + strand, within CA264_13055 at 3044.802 kb on - strand, within CA264_13055 at 3044.802 kb on - strand, within CA264_13055 at 3044.906 kb on - strand, within CA264_13055 at 3044.920 kb on - strand, within CA264_13055 at 3044.920 kb on - strand, within CA264_13055 at 3044.925 kb on + strand, within CA264_13055 at 3044.925 kb on + strand, within CA264_13055 at 3044.926 kb on - strand, within CA264_13055 at 3044.936 kb on + strand, within CA264_13055 at 3044.937 kb on - strand, within CA264_13055 at 3044.937 kb on - strand, within CA264_13055 at 3044.951 kb on + strand, within CA264_13055 at 3044.995 kb on - strand, within CA264_13055 at 3045.152 kb on + strand, within CA264_13055 at 3045.277 kb on + strand at 3045.309 kb on + strand at 3045.310 kb on - strand at 3045.312 kb on - strand at 3045.316 kb on + strand at 3045.316 kb on + strand at 3045.316 kb on + strand at 3045.317 kb on - strand at 3045.317 kb on - strand at 3045.351 kb on + strand at 3045.412 kb on - strand at 3045.479 kb on - strand at 3045.502 kb on - strand at 3045.502 kb on - strand at 3045.502 kb on - strand at 3045.504 kb on - strand at 3045.504 kb on - strand at 3045.543 kb on - strand at 3045.588 kb on - strand at 3045.641 kb on - strand at 3045.681 kb on + strand at 3045.681 kb on + strand at 3045.689 kb on + strand at 3045.828 kb on + strand at 3045.999 kb on + strand at 3046.000 kb on - strand at 3046.108 kb on + strand at 3046.131 kb on + strand at 3046.186 kb on - strand at 3046.186 kb on - strand at 3046.243 kb on - strand, within CA264_13065 at 3046.267 kb on + strand, within CA264_13065 at 3046.274 kb on + strand, within CA264_13065 at 3046.322 kb on + strand, within CA264_13065 at 3046.322 kb on + strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.323 kb on - strand, within CA264_13065 at 3046.325 kb on - strand, within CA264_13065 at 3046.325 kb on - strand, within CA264_13065 at 3046.350 kb on + strand, within CA264_13065 at 3046.350 kb on + strand, within CA264_13065 at 3046.351 kb on - strand, within CA264_13065 at 3046.351 kb on - strand, within CA264_13065 at 3046.444 kb on + strand, within CA264_13065 at 3046.445 kb on - strand, within CA264_13065 at 3046.445 kb on - strand, within CA264_13065
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 3,042,319 + CA264_13050 0.48 +2.0 3,042,411 - CA264_13050 0.55 +0.0 3,042,411 - CA264_13050 0.55 +0.6 3,042,423 - CA264_13050 0.56 +0.5 3,042,452 + CA264_13050 0.58 +0.1 3,042,452 + CA264_13050 0.58 +1.2 3,042,454 + CA264_13050 0.58 +0.2 3,042,454 + CA264_13050 0.58 -0.3 3,042,454 + CA264_13050 0.58 +0.3 3,042,552 + CA264_13050 0.66 +0.1 3,042,553 - CA264_13050 0.66 +0.4 3,042,638 - CA264_13050 0.73 -0.6 3,042,639 + CA264_13050 0.73 +0.5 3,042,640 - CA264_13050 0.73 +0.1 3,042,679 - CA264_13050 0.76 +0.6 3,042,726 - CA264_13050 0.80 -1.0 3,042,808 + CA264_13050 0.86 -1.4 3,042,808 + CA264_13050 0.86 +0.2 3,042,808 + CA264_13050 0.86 +0.2 3,042,808 + CA264_13050 0.86 -0.4 3,042,808 + CA264_13050 0.86 +0.2 3,042,809 - CA264_13050 0.86 +0.5 3,042,812 + CA264_13050 0.86 +0.2 3,042,813 - CA264_13050 0.86 -0.1 3,042,813 - CA264_13050 0.86 +0.2 3,042,813 - CA264_13050 0.86 +1.6 3,042,839 + CA264_13050 0.88 +1.0 3,042,985 - +0.6 3,042,985 - -0.7 3,043,155 + -0.2 3,043,195 + +1.3 3,043,195 + -1.1 3,043,244 - -0.4 3,043,244 - -0.1 3,043,362 + -0.6 3,043,366 + -0.5 3,043,366 + -1.3 3,043,366 + +1.0 3,043,414 - +0.0 3,043,443 - +0.4 3,043,443 - +0.3 3,043,487 + +0.3 3,043,488 - +1.0 3,043,502 + +0.3 3,043,574 - CA264_13055 0.12 -0.6 3,043,577 + CA264_13055 0.12 +0.1 3,043,578 - CA264_13055 0.12 +0.5 3,043,578 - CA264_13055 0.12 +0.4 3,043,616 - CA264_13055 0.14 -0.1 3,043,620 - CA264_13055 0.14 +0.7 3,043,647 - CA264_13055 0.16 -0.6 3,043,650 + CA264_13055 0.16 -1.0 3,043,650 + CA264_13055 0.16 +0.8 3,043,651 - CA264_13055 0.16 -1.7 3,043,651 - CA264_13055 0.16 +0.6 3,043,709 + CA264_13055 0.18 -0.2 3,043,710 - CA264_13055 0.18 -1.3 3,043,710 - CA264_13055 0.18 -1.1 3,043,710 - CA264_13055 0.18 +0.8 3,043,748 + CA264_13055 0.20 +0.6 3,043,748 + CA264_13055 0.20 -0.5 3,043,749 - CA264_13055 0.20 -0.3 3,043,756 + CA264_13055 0.21 -0.1 3,043,757 - CA264_13055 0.21 -0.3 3,043,760 + CA264_13055 0.21 +2.6 3,043,760 + CA264_13055 0.21 +0.4 3,043,761 - CA264_13055 0.21 -0.4 3,043,761 - CA264_13055 0.21 +0.5 3,043,761 - CA264_13055 0.21 -0.2 3,043,761 - CA264_13055 0.21 -0.0 3,043,761 - CA264_13055 0.21 +0.5 3,043,763 + CA264_13055 0.21 +0.4 3,043,764 - CA264_13055 0.21 -0.0 3,043,788 + CA264_13055 0.22 +0.6 3,043,814 + CA264_13055 0.23 -0.1 3,043,817 + CA264_13055 0.24 -0.3 3,043,818 - CA264_13055 0.24 -0.6 3,043,849 - CA264_13055 0.25 -0.2 3,043,850 + CA264_13055 0.25 +0.6 3,043,850 + CA264_13055 0.25 +0.1 3,043,851 - CA264_13055 0.25 -1.1 3,043,971 - CA264_13055 0.31 -0.1 3,044,019 + CA264_13055 0.33 -0.6 3,044,027 + CA264_13055 0.33 +0.8 3,044,053 + CA264_13055 0.35 +3.3 3,044,054 - CA264_13055 0.35 +0.3 3,044,054 - CA264_13055 0.35 -2.0 3,044,058 - CA264_13055 0.35 -1.5 3,044,117 + CA264_13055 0.38 +0.6 3,044,118 - CA264_13055 0.38 +1.0 3,044,118 - CA264_13055 0.38 -0.0 3,044,186 + CA264_13055 0.41 +1.0 3,044,186 + CA264_13055 0.41 +1.2 3,044,473 + CA264_13055 0.54 +1.0 3,044,492 + CA264_13055 0.55 +0.0 3,044,516 - CA264_13055 0.56 +0.0 3,044,620 + CA264_13055 0.61 +1.4 3,044,620 + CA264_13055 0.61 -0.1 3,044,621 - CA264_13055 0.61 -0.9 3,044,621 - CA264_13055 0.61 +0.1 3,044,621 - CA264_13055 0.61 -0.6 3,044,730 + CA264_13055 0.66 +0.2 3,044,730 + CA264_13055 0.66 -0.7 3,044,731 - CA264_13055 0.66 -1.5 3,044,731 - CA264_13055 0.66 -0.3 3,044,736 + +2.0 3,044,737 - CA264_13055 0.67 -0.7 3,044,801 + CA264_13055 0.70 +0.4 3,044,801 + CA264_13055 0.70 +0.6 3,044,802 - CA264_13055 0.70 +0.4 3,044,802 - CA264_13055 0.70 +0.3 3,044,906 - CA264_13055 0.74 +0.0 3,044,920 - CA264_13055 0.75 -0.7 3,044,920 - CA264_13055 0.75 +1.1 3,044,925 + CA264_13055 0.75 -0.3 3,044,925 + CA264_13055 0.75 -0.6 3,044,926 - CA264_13055 0.75 -1.0 3,044,936 + CA264_13055 0.76 +0.0 3,044,937 - CA264_13055 0.76 +0.2 3,044,937 - CA264_13055 0.76 -0.6 3,044,951 + CA264_13055 0.77 +0.1 3,044,995 - CA264_13055 0.79 +1.8 3,045,152 + CA264_13055 0.86 -0.1 3,045,277 + -0.9 3,045,309 + +0.1 3,045,310 - +2.6 3,045,312 - +1.4 3,045,316 + +0.0 3,045,316 + +0.1 3,045,316 + +0.5 3,045,317 - +0.5 3,045,317 - -0.0 3,045,351 + -1.1 3,045,412 - +0.3 3,045,479 - -1.1 3,045,502 - -0.0 3,045,502 - +0.4 3,045,502 - -1.7 3,045,504 - +0.4 3,045,504 - -0.6 3,045,543 - -1.4 3,045,588 - -0.2 3,045,641 - +2.6 3,045,681 + -0.6 3,045,681 + +0.7 3,045,689 + +0.0 3,045,828 + +0.6 3,045,999 + -0.2 3,046,000 - +0.2 3,046,108 + +1.0 3,046,131 + +0.6 3,046,186 - +0.3 3,046,186 - +2.0 3,046,243 - CA264_13065 0.11 +0.2 3,046,267 + CA264_13065 0.12 +0.7 3,046,274 + CA264_13065 0.12 -0.6 3,046,322 + CA264_13065 0.15 +0.6 3,046,322 + CA264_13065 0.15 -0.1 3,046,323 - CA264_13065 0.15 -0.7 3,046,323 - CA264_13065 0.15 -0.6 3,046,323 - CA264_13065 0.15 +0.7 3,046,323 - CA264_13065 0.15 +2.6 3,046,325 - CA264_13065 0.15 +0.8 3,046,325 - CA264_13065 0.15 -0.1 3,046,350 + CA264_13065 0.16 +1.6 3,046,350 + CA264_13065 0.16 -1.0 3,046,351 - CA264_13065 0.16 +0.4 3,046,351 - CA264_13065 0.16 +1.8 3,046,444 + CA264_13065 0.21 +1.0 3,046,445 - CA264_13065 0.21 -0.8 3,046,445 - CA264_13065 0.21 -0.1
Or see this region's nucleotide sequence