Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12495 and CA264_12500 are separated by 178 nucleotides CA264_12500 and CA264_12505 overlap by 4 nucleotides CA264_12505 and CA264_12510 overlap by 11 nucleotides
CA264_12495: CA264_12495 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 2,909,912 to 2,910,934
_12495
CA264_12500: CA264_12500 - UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, at 2,911,113 to 2,912,507
_12500
CA264_12505: CA264_12505 - acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase, at 2,912,504 to 2,913,295
_12505
CA264_12510: CA264_12510 - ABC transporter ATP-binding protein, at 2,913,285 to 2,913,917
_12510
Position (kb)
2911
2912
2913 Strain fitness (log2 ratio)
-2
-1
0
1 at 2910.946 kb on - strand at 2910.946 kb on - strand at 2910.968 kb on + strand at 2910.988 kb on - strand at 2910.992 kb on + strand at 2910.992 kb on + strand at 2911.031 kb on + strand at 2911.031 kb on + strand at 2911.034 kb on - strand at 2911.034 kb on - strand at 2911.034 kb on - strand at 2911.037 kb on + strand at 2911.037 kb on + strand at 2911.059 kb on + strand at 2911.079 kb on + strand at 2911.102 kb on + strand at 2911.103 kb on - strand at 2911.103 kb on - strand at 2911.103 kb on - strand at 2912.491 kb on + strand at 2912.518 kb on - strand at 2912.527 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 2,910,946 - -0.6 2,910,946 - -0.1 2,910,968 + +0.1 2,910,988 - -0.0 2,910,992 + +0.0 2,910,992 + -1.0 2,911,031 + -0.8 2,911,031 + -0.2 2,911,034 - -0.6 2,911,034 - +1.1 2,911,034 - -1.0 2,911,037 + -0.2 2,911,037 + +0.2 2,911,059 + +0.1 2,911,079 + -1.6 2,911,102 + +0.5 2,911,103 - +0.3 2,911,103 - +0.6 2,911,103 - +0.4 2,912,491 + -2.1 2,912,518 - +0.1 2,912,527 - +1.6
Or see this region's nucleotide sequence