Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12085 and CA264_12090 overlap by 4 nucleotides CA264_12090 and CA264_12095 are separated by 101 nucleotides CA264_12095 and CA264_12100 are separated by 73 nucleotides CA264_12100 and CA264_12105 are separated by 111 nucleotides
CA264_12085: CA264_12085 - hypothetical protein, at 2,819,624 to 2,819,899
_12085
CA264_12090: CA264_12090 - hydrolase, at 2,819,896 to 2,820,657
_12090
CA264_12095: CA264_12095 - hypothetical protein, at 2,820,759 to 2,822,327
_12095
CA264_12100: CA264_12100 - NUDIX hydrolase, at 2,822,401 to 2,822,964
_12100
CA264_12105: CA264_12105 - methyltransferase, TIGR04290 family, at 2,823,076 to 2,823,891
_12105
Position (kb)
2820
2821
2822
2823 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2819.771 kb on + strand, within CA264_12085 at 2819.772 kb on - strand, within CA264_12085 at 2819.903 kb on + strand at 2819.903 kb on + strand at 2819.903 kb on + strand at 2820.254 kb on - strand, within CA264_12090 at 2820.390 kb on + strand, within CA264_12090 at 2820.391 kb on - strand, within CA264_12090 at 2820.391 kb on - strand, within CA264_12090 at 2820.394 kb on + strand, within CA264_12090 at 2820.394 kb on + strand, within CA264_12090 at 2820.395 kb on - strand, within CA264_12090 at 2820.553 kb on + strand, within CA264_12090 at 2820.554 kb on - strand, within CA264_12090 at 2820.620 kb on + strand at 2820.621 kb on - strand at 2820.654 kb on - strand at 2820.673 kb on + strand at 2820.755 kb on + strand at 2820.755 kb on + strand at 2820.755 kb on - strand at 2820.756 kb on - strand at 2820.767 kb on - strand at 2820.767 kb on - strand at 2820.767 kb on - strand at 2820.767 kb on - strand at 2820.774 kb on + strand at 2820.790 kb on + strand at 2820.864 kb on - strand at 2820.864 kb on - strand at 2820.897 kb on + strand at 2821.047 kb on + strand, within CA264_12095 at 2821.083 kb on - strand, within CA264_12095 at 2821.083 kb on - strand, within CA264_12095 at 2821.111 kb on + strand, within CA264_12095 at 2821.111 kb on + strand, within CA264_12095 at 2821.112 kb on - strand, within CA264_12095 at 2821.112 kb on - strand, within CA264_12095 at 2821.112 kb on - strand, within CA264_12095 at 2821.116 kb on + strand, within CA264_12095 at 2821.117 kb on - strand, within CA264_12095 at 2821.152 kb on - strand, within CA264_12095 at 2821.252 kb on + strand, within CA264_12095 at 2821.253 kb on - strand, within CA264_12095 at 2821.253 kb on - strand, within CA264_12095 at 2821.255 kb on - strand, within CA264_12095 at 2821.255 kb on - strand, within CA264_12095 at 2821.259 kb on + strand, within CA264_12095 at 2821.284 kb on + strand, within CA264_12095 at 2821.380 kb on + strand, within CA264_12095 at 2821.380 kb on + strand, within CA264_12095 at 2821.380 kb on + strand, within CA264_12095 at 2821.380 kb on + strand, within CA264_12095 at 2821.381 kb on - strand, within CA264_12095 at 2821.435 kb on + strand, within CA264_12095 at 2821.442 kb on + strand, within CA264_12095 at 2821.442 kb on + strand, within CA264_12095 at 2821.443 kb on - strand, within CA264_12095 at 2821.443 kb on - strand, within CA264_12095 at 2821.443 kb on - strand, within CA264_12095 at 2821.443 kb on - strand, within CA264_12095 at 2821.446 kb on + strand, within CA264_12095 at 2821.447 kb on - strand, within CA264_12095 at 2821.476 kb on + strand, within CA264_12095 at 2821.476 kb on + strand, within CA264_12095 at 2821.488 kb on + strand, within CA264_12095 at 2821.488 kb on + strand, within CA264_12095 at 2821.488 kb on + strand, within CA264_12095 at 2821.492 kb on + strand, within CA264_12095 at 2821.684 kb on + strand, within CA264_12095 at 2821.684 kb on + strand, within CA264_12095 at 2821.692 kb on + strand, within CA264_12095 at 2821.722 kb on + strand, within CA264_12095 at 2821.724 kb on + strand, within CA264_12095 at 2821.795 kb on + strand, within CA264_12095 at 2821.796 kb on - strand, within CA264_12095 at 2821.796 kb on - strand, within CA264_12095 at 2821.890 kb on + strand, within CA264_12095 at 2821.892 kb on + strand, within CA264_12095 at 2821.892 kb on + strand, within CA264_12095 at 2821.892 kb on + strand, within CA264_12095 at 2821.920 kb on + strand, within CA264_12095 at 2821.920 kb on + strand, within CA264_12095 at 2821.994 kb on + strand, within CA264_12095 at 2821.999 kb on + strand, within CA264_12095 at 2822.048 kb on + strand, within CA264_12095 at 2822.052 kb on + strand, within CA264_12095 at 2822.052 kb on + strand, within CA264_12095 at 2822.053 kb on - strand, within CA264_12095 at 2822.053 kb on - strand, within CA264_12095 at 2822.071 kb on + strand, within CA264_12095 at 2822.106 kb on - strand, within CA264_12095 at 2822.143 kb on + strand, within CA264_12095 at 2822.173 kb on - strand at 2822.173 kb on - strand at 2822.176 kb on - strand at 2822.210 kb on + strand at 2822.296 kb on + strand at 2822.392 kb on + strand at 2822.393 kb on - strand at 2822.393 kb on - strand at 2822.402 kb on + strand at 2822.434 kb on - strand at 2822.509 kb on + strand, within CA264_12100 at 2822.509 kb on + strand, within CA264_12100 at 2822.510 kb on - strand, within CA264_12100 at 2822.574 kb on - strand, within CA264_12100 at 2822.574 kb on - strand, within CA264_12100 at 2822.577 kb on - strand, within CA264_12100 at 2822.579 kb on + strand, within CA264_12100 at 2822.760 kb on - strand, within CA264_12100 at 2822.834 kb on + strand, within CA264_12100 at 2822.837 kb on + strand, within CA264_12100 at 2822.870 kb on - strand, within CA264_12100 at 2822.976 kb on - strand at 2822.977 kb on + strand at 2822.981 kb on + strand at 2822.981 kb on + strand at 2822.982 kb on - strand at 2822.984 kb on + strand at 2823.102 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 2,819,771 + CA264_12085 0.53 -0.1 2,819,772 - CA264_12085 0.54 -0.1 2,819,903 + -0.7 2,819,903 + -1.2 2,819,903 + -1.0 2,820,254 - CA264_12090 0.47 -0.4 2,820,390 + CA264_12090 0.65 -0.8 2,820,391 - CA264_12090 0.65 +0.1 2,820,391 - CA264_12090 0.65 +0.4 2,820,394 + CA264_12090 0.65 -0.1 2,820,394 + CA264_12090 0.65 -0.3 2,820,395 - CA264_12090 0.65 -0.1 2,820,553 + CA264_12090 0.86 +0.7 2,820,554 - CA264_12090 0.86 +0.5 2,820,620 + +1.9 2,820,621 - -1.1 2,820,654 - -0.1 2,820,673 + -0.9 2,820,755 + -0.4 2,820,755 + +0.3 2,820,755 - -0.5 2,820,756 - -1.7 2,820,767 - -0.7 2,820,767 - +0.4 2,820,767 - +0.7 2,820,767 - -0.3 2,820,774 + +0.5 2,820,790 + +0.8 2,820,864 - +0.6 2,820,864 - +0.1 2,820,897 + +1.5 2,821,047 + CA264_12095 0.18 -0.3 2,821,083 - CA264_12095 0.21 +0.4 2,821,083 - CA264_12095 0.21 -1.4 2,821,111 + CA264_12095 0.22 -0.6 2,821,111 + CA264_12095 0.22 +0.3 2,821,112 - CA264_12095 0.22 -0.5 2,821,112 - CA264_12095 0.22 -0.1 2,821,112 - CA264_12095 0.22 +0.9 2,821,116 + CA264_12095 0.23 -0.3 2,821,117 - CA264_12095 0.23 -0.1 2,821,152 - CA264_12095 0.25 +0.5 2,821,252 + CA264_12095 0.31 -0.1 2,821,253 - CA264_12095 0.31 -0.4 2,821,253 - CA264_12095 0.31 -1.1 2,821,255 - CA264_12095 0.32 -0.2 2,821,255 - CA264_12095 0.32 +0.4 2,821,259 + CA264_12095 0.32 -0.4 2,821,284 + CA264_12095 0.33 -0.0 2,821,380 + CA264_12095 0.40 +0.8 2,821,380 + CA264_12095 0.40 -0.1 2,821,380 + CA264_12095 0.40 -0.6 2,821,380 + CA264_12095 0.40 +0.5 2,821,381 - CA264_12095 0.40 -0.8 2,821,435 + CA264_12095 0.43 +0.4 2,821,442 + CA264_12095 0.44 +0.6 2,821,442 + CA264_12095 0.44 +0.5 2,821,443 - CA264_12095 0.44 +0.9 2,821,443 - CA264_12095 0.44 -2.0 2,821,443 - CA264_12095 0.44 +0.0 2,821,443 - CA264_12095 0.44 +0.9 2,821,446 + CA264_12095 0.44 +0.5 2,821,447 - CA264_12095 0.44 -0.3 2,821,476 + CA264_12095 0.46 +0.3 2,821,476 + CA264_12095 0.46 -0.1 2,821,488 + CA264_12095 0.46 -0.3 2,821,488 + CA264_12095 0.46 +0.8 2,821,488 + CA264_12095 0.46 +1.9 2,821,492 + CA264_12095 0.47 -1.4 2,821,684 + CA264_12095 0.59 +0.0 2,821,684 + CA264_12095 0.59 -0.4 2,821,692 + CA264_12095 0.59 -0.5 2,821,722 + CA264_12095 0.61 +1.9 2,821,724 + CA264_12095 0.62 +0.9 2,821,795 + CA264_12095 0.66 -1.0 2,821,796 - CA264_12095 0.66 +0.0 2,821,796 - CA264_12095 0.66 -0.3 2,821,890 + CA264_12095 0.72 +0.2 2,821,892 + CA264_12095 0.72 -1.4 2,821,892 + CA264_12095 0.72 -0.1 2,821,892 + CA264_12095 0.72 +0.1 2,821,920 + CA264_12095 0.74 +0.5 2,821,920 + CA264_12095 0.74 -0.1 2,821,994 + CA264_12095 0.79 -1.1 2,821,999 + CA264_12095 0.79 +0.3 2,822,048 + CA264_12095 0.82 -0.6 2,822,052 + CA264_12095 0.82 +0.4 2,822,052 + CA264_12095 0.82 -1.6 2,822,053 - CA264_12095 0.82 -0.6 2,822,053 - CA264_12095 0.82 -1.2 2,822,071 + CA264_12095 0.84 +0.1 2,822,106 - CA264_12095 0.86 -1.3 2,822,143 + CA264_12095 0.88 -0.5 2,822,173 - +0.3 2,822,173 - +0.6 2,822,176 - +0.7 2,822,210 + +0.0 2,822,296 + -0.0 2,822,392 + -0.6 2,822,393 - +0.9 2,822,393 - +1.5 2,822,402 + +1.1 2,822,434 - +0.6 2,822,509 + CA264_12100 0.19 +0.5 2,822,509 + CA264_12100 0.19 -0.1 2,822,510 - CA264_12100 0.19 -0.6 2,822,574 - CA264_12100 0.31 +0.9 2,822,574 - CA264_12100 0.31 +0.1 2,822,577 - CA264_12100 0.31 +0.4 2,822,579 + CA264_12100 0.32 +0.3 2,822,760 - CA264_12100 0.64 +0.2 2,822,834 + CA264_12100 0.77 +0.3 2,822,837 + CA264_12100 0.77 +0.3 2,822,870 - CA264_12100 0.83 -1.1 2,822,976 - +0.9 2,822,977 + -0.1 2,822,981 + -0.1 2,822,981 + -0.1 2,822,982 - +0.4 2,822,984 + +0.1 2,823,102 - -0.6
Or see this region's nucleotide sequence