Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_09495 and CA264_09500 are separated by 24 nucleotides CA264_09500 and CA264_09505 are separated by 42 nucleotides CA264_09505 and CA264_09510 are separated by 371 nucleotides CA264_09510 and CA264_09515 are separated by 335 nucleotides CA264_09515 and CA264_09520 are separated by 113 nucleotides
CA264_09495: CA264_09495 - potassium-transporting ATPase subunit KdpA, at 2,218,915 to 2,220,612
_09495
CA264_09500: CA264_09500 - potassium-transporting ATPase subunit F, at 2,220,637 to 2,220,714
_09500
CA264_09505: CA264_09505 - hypothetical protein, at 2,220,757 to 2,221,107
_09505
CA264_09510: CA264_09510 - sigma-54-dependent Fis family transcriptional regulator, at 2,221,479 to 2,222,834
_09510
CA264_09515: CA264_09515 - hypothetical protein, at 2,223,170 to 2,223,385
_09515
CA264_09520: CA264_09520 - hypothetical protein, at 2,223,499 to 2,224,377
_09520
Position (kb)
2221
2222
2223 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2220.525 kb on - strand at 2220.527 kb on - strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.539 kb on + strand at 2220.598 kb on + strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.599 kb on - strand at 2220.600 kb on + strand at 2220.600 kb on + strand at 2220.601 kb on - strand at 2220.601 kb on - strand at 2220.639 kb on - strand at 2220.674 kb on + strand, within CA264_09500 at 2220.695 kb on - strand, within CA264_09500 at 2220.715 kb on - strand at 2220.727 kb on + strand at 2220.729 kb on + strand at 2220.730 kb on - strand at 2220.742 kb on + strand at 2220.742 kb on + strand at 2220.837 kb on + strand, within CA264_09505 at 2220.837 kb on + strand, within CA264_09505 at 2220.849 kb on - strand, within CA264_09505 at 2220.864 kb on - strand, within CA264_09505 at 2220.869 kb on + strand, within CA264_09505 at 2220.869 kb on + strand, within CA264_09505 at 2220.870 kb on - strand, within CA264_09505 at 2220.870 kb on - strand, within CA264_09505 at 2220.986 kb on + strand, within CA264_09505 at 2221.037 kb on - strand, within CA264_09505 at 2221.041 kb on + strand, within CA264_09505 at 2221.108 kb on - strand at 2221.222 kb on + strand at 2221.223 kb on - strand at 2221.227 kb on + strand at 2221.228 kb on - strand at 2221.277 kb on + strand at 2221.277 kb on + strand at 2221.277 kb on + strand at 2221.297 kb on + strand at 2221.310 kb on + strand at 2221.310 kb on + strand at 2221.408 kb on + strand at 2221.408 kb on + strand at 2221.410 kb on + strand at 2221.410 kb on + strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.411 kb on - strand at 2221.437 kb on + strand at 2221.439 kb on + strand at 2221.443 kb on + strand at 2221.443 kb on + strand at 2221.443 kb on + strand at 2221.444 kb on - strand at 2221.462 kb on + strand at 2221.464 kb on + strand at 2221.464 kb on + strand at 2221.465 kb on - strand at 2221.465 kb on - strand at 2221.620 kb on - strand, within CA264_09510 at 2221.707 kb on + strand, within CA264_09510 at 2221.708 kb on - strand, within CA264_09510 at 2221.828 kb on + strand, within CA264_09510 at 2221.828 kb on + strand, within CA264_09510 at 2221.829 kb on - strand, within CA264_09510 at 2221.896 kb on + strand, within CA264_09510 at 2221.896 kb on + strand, within CA264_09510 at 2221.896 kb on + strand, within CA264_09510 at 2221.919 kb on - strand, within CA264_09510 at 2222.071 kb on - strand, within CA264_09510 at 2222.091 kb on + strand, within CA264_09510 at 2222.108 kb on + strand, within CA264_09510 at 2222.108 kb on + strand, within CA264_09510 at 2222.373 kb on + strand, within CA264_09510 at 2222.400 kb on - strand, within CA264_09510 at 2222.403 kb on + strand, within CA264_09510 at 2222.404 kb on - strand, within CA264_09510 at 2222.414 kb on + strand, within CA264_09510 at 2222.554 kb on - strand, within CA264_09510 at 2222.839 kb on - strand at 2222.890 kb on - strand at 2222.924 kb on - strand at 2222.926 kb on - strand at 2222.932 kb on - strand at 2222.950 kb on - strand at 2223.120 kb on - strand at 2223.485 kb on - strand at 2223.488 kb on + strand at 2223.488 kb on + strand at 2223.495 kb on + strand at 2223.495 kb on + strand at 2223.495 kb on + strand at 2223.513 kb on + strand at 2223.541 kb on + strand at 2223.542 kb on - strand at 2223.546 kb on + strand at 2223.546 kb on + strand at 2223.590 kb on - strand, within CA264_09520 at 2223.656 kb on + strand, within CA264_09520 at 2223.656 kb on + strand, within CA264_09520 at 2223.657 kb on - strand, within CA264_09520 at 2223.689 kb on + strand, within CA264_09520 at 2223.705 kb on + strand, within CA264_09520 at 2223.706 kb on - strand, within CA264_09520 at 2223.754 kb on + strand, within CA264_09520 at 2223.755 kb on - strand, within CA264_09520 at 2223.829 kb on + strand, within CA264_09520 at 2223.829 kb on + strand, within CA264_09520 at 2223.830 kb on - strand, within CA264_09520
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 2,220,525 - -0.3 2,220,527 - +1.8 2,220,539 + +0.2 2,220,539 + +0.4 2,220,539 + -0.3 2,220,539 + -0.1 2,220,539 + -0.4 2,220,598 + +0.3 2,220,599 - -0.9 2,220,599 - -1.0 2,220,599 - +0.4 2,220,599 - -0.4 2,220,600 + -0.3 2,220,600 + -1.8 2,220,601 - -0.3 2,220,601 - -1.8 2,220,639 - -0.5 2,220,674 + CA264_09500 0.47 -0.8 2,220,695 - CA264_09500 0.74 +0.8 2,220,715 - -0.5 2,220,727 + -1.7 2,220,729 + -1.6 2,220,730 - -0.5 2,220,742 + -1.5 2,220,742 + +0.3 2,220,837 + CA264_09505 0.23 +1.8 2,220,837 + CA264_09505 0.23 -0.2 2,220,849 - CA264_09505 0.26 -1.1 2,220,864 - CA264_09505 0.30 +2.4 2,220,869 + CA264_09505 0.32 +1.5 2,220,869 + CA264_09505 0.32 +0.0 2,220,870 - CA264_09505 0.32 -0.5 2,220,870 - CA264_09505 0.32 +0.3 2,220,986 + CA264_09505 0.65 +1.5 2,221,037 - CA264_09505 0.80 -1.2 2,221,041 + CA264_09505 0.81 -0.9 2,221,108 - -0.6 2,221,222 + -0.6 2,221,223 - -0.4 2,221,227 + -0.4 2,221,228 - -1.0 2,221,277 + +0.4 2,221,277 + -1.5 2,221,277 + +2.3 2,221,297 + -0.8 2,221,310 + -0.9 2,221,310 + +0.2 2,221,408 + +0.3 2,221,408 + +0.1 2,221,410 + -0.5 2,221,410 + -0.2 2,221,411 - +1.0 2,221,411 - +0.3 2,221,411 - +0.3 2,221,411 - +0.1 2,221,437 + +0.8 2,221,439 + +0.2 2,221,443 + +0.7 2,221,443 + +0.4 2,221,443 + +0.6 2,221,444 - +0.6 2,221,462 + -0.7 2,221,464 + +0.6 2,221,464 + +0.3 2,221,465 - -0.6 2,221,465 - -0.0 2,221,620 - CA264_09510 0.10 -1.1 2,221,707 + CA264_09510 0.17 -0.4 2,221,708 - CA264_09510 0.17 +1.2 2,221,828 + CA264_09510 0.26 -0.6 2,221,828 + CA264_09510 0.26 -2.6 2,221,829 - CA264_09510 0.26 +0.2 2,221,896 + CA264_09510 0.31 +0.5 2,221,896 + CA264_09510 0.31 -0.0 2,221,896 + CA264_09510 0.31 -0.4 2,221,919 - CA264_09510 0.32 -1.3 2,222,071 - CA264_09510 0.44 -0.6 2,222,091 + CA264_09510 0.45 -1.5 2,222,108 + CA264_09510 0.46 -0.2 2,222,108 + CA264_09510 0.46 +0.2 2,222,373 + CA264_09510 0.66 -0.5 2,222,400 - CA264_09510 0.68 +0.1 2,222,403 + CA264_09510 0.68 -0.2 2,222,404 - CA264_09510 0.68 +0.5 2,222,414 + CA264_09510 0.69 -1.7 2,222,554 - CA264_09510 0.79 -1.5 2,222,839 - -0.2 2,222,890 - -1.5 2,222,924 - -0.1 2,222,926 - -0.0 2,222,932 - +0.2 2,222,950 - -0.8 2,223,120 - +0.5 2,223,485 - +0.8 2,223,488 + -0.4 2,223,488 + -0.2 2,223,495 + +0.2 2,223,495 + +0.8 2,223,495 + -0.6 2,223,513 + +0.8 2,223,541 + -2.0 2,223,542 - -0.2 2,223,546 + +0.1 2,223,546 + +0.3 2,223,590 - CA264_09520 0.10 -1.2 2,223,656 + CA264_09520 0.18 -0.6 2,223,656 + CA264_09520 0.18 -0.5 2,223,657 - CA264_09520 0.18 +0.4 2,223,689 + CA264_09520 0.22 -0.6 2,223,705 + CA264_09520 0.23 +0.4 2,223,706 - CA264_09520 0.24 +0.4 2,223,754 + CA264_09520 0.29 +1.4 2,223,755 - CA264_09520 0.29 -1.0 2,223,829 + CA264_09520 0.38 -0.1 2,223,829 + CA264_09520 0.38 +0.2 2,223,830 - CA264_09520 0.38 +0.9
Or see this region's nucleotide sequence