Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_08840
Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | m.b. benzoic 0.4 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,064,860 | - | -0.3 | |||
2,064,903 | + | +0.8 | |||
2,064,916 | + | +0.0 | |||
2,064,917 | - | -0.2 | |||
2,064,953 | - | -0.2 | |||
2,064,953 | - | +0.9 | |||
2,064,972 | + | -0.2 | |||
2,065,019 | + | +0.1 | |||
2,065,083 | + | +0.8 | |||
2,065,083 | + | -0.2 | |||
2,065,084 | - | +1.2 | |||
2,065,205 | + | -0.1 | |||
2,065,232 | + | +1.8 | |||
2,065,232 | + | -0.1 | |||
2,065,232 | + | +0.8 | |||
2,065,241 | + | -0.1 | |||
2,065,260 | - | -0.9 | |||
2,065,292 | + | -0.2 | |||
2,065,293 | - | -1.0 | |||
2,065,403 | + | CA264_08840 | 0.16 | -0.6 | |
2,065,443 | + | CA264_08840 | 0.25 | +0.2 | |
2,065,443 | + | CA264_08840 | 0.25 | -0.2 | |
2,065,506 | - | CA264_08840 | 0.39 | -0.8 | |
2,065,509 | + | CA264_08840 | 0.39 | -1.5 | |
2,065,510 | - | CA264_08840 | 0.39 | -1.4 | |
2,065,525 | + | CA264_08840 | 0.43 | -0.2 | |
2,065,525 | + | CA264_08840 | 0.43 | +0.0 | |
2,065,654 | + | CA264_08840 | 0.71 | -0.5 | |
2,065,949 | + | +0.8 | |||
2,065,949 | + | +0.8 | |||
2,065,949 | + | +0.3 | |||
2,065,949 | + | -1.2 | |||
2,065,949 | + | +0.6 | |||
2,065,949 | + | -0.3 | |||
2,065,950 | - | -1.0 | |||
2,065,950 | - | +0.6 | |||
2,065,973 | + | -0.4 | |||
2,065,973 | + | -0.2 |
Or see this region's nucleotide sequence