Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07750 and CA264_07755 are separated by 3 nucleotides CA264_07755 and CA264_07760 are separated by 105 nucleotides CA264_07760 and CA264_07765 are separated by 236 nucleotides
CA264_07750: CA264_07750 - elongation factor P, at 1,795,824 to 1,796,387
_07750
CA264_07755: CA264_07755 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 1,796,391 to 1,796,882
_07755
CA264_07760: CA264_07760 - acetyl-CoA carboxylase biotin carboxylase subunit, at 1,796,988 to 1,798,334
_07760
CA264_07765: CA264_07765 - hypothetical protein, at 1,798,571 to 1,799,407
_07765
Position (kb)
1796
1797
1798
1799 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1796.057 kb on - strand, within CA264_07750 at 1796.062 kb on - strand, within CA264_07750 at 1796.226 kb on - strand, within CA264_07750 at 1796.226 kb on - strand, within CA264_07750 at 1798.363 kb on + strand at 1798.363 kb on + strand at 1798.363 kb on + strand at 1798.371 kb on + strand at 1798.411 kb on + strand at 1798.411 kb on + strand at 1798.411 kb on + strand at 1798.411 kb on + strand at 1798.411 kb on + strand at 1798.412 kb on - strand at 1798.412 kb on - strand at 1798.412 kb on - strand at 1798.412 kb on - strand at 1798.441 kb on - strand at 1798.442 kb on + strand at 1798.443 kb on - strand at 1798.445 kb on + strand at 1798.446 kb on - strand at 1798.453 kb on + strand at 1798.453 kb on + strand at 1798.454 kb on - strand at 1798.462 kb on + strand at 1798.473 kb on + strand at 1798.473 kb on + strand at 1798.555 kb on - strand at 1798.556 kb on + strand at 1798.590 kb on + strand at 1798.590 kb on + strand at 1798.611 kb on + strand at 1798.650 kb on + strand at 1798.650 kb on + strand at 1798.651 kb on - strand at 1798.692 kb on - strand, within CA264_07765 at 1798.700 kb on + strand, within CA264_07765 at 1798.735 kb on + strand, within CA264_07765 at 1798.814 kb on + strand, within CA264_07765 at 1798.814 kb on + strand, within CA264_07765 at 1798.815 kb on - strand, within CA264_07765 at 1798.874 kb on - strand, within CA264_07765 at 1798.874 kb on - strand, within CA264_07765 at 1798.928 kb on + strand, within CA264_07765 at 1798.957 kb on + strand, within CA264_07765 at 1798.983 kb on + strand, within CA264_07765 at 1799.015 kb on + strand, within CA264_07765 at 1799.117 kb on + strand, within CA264_07765 at 1799.165 kb on + strand, within CA264_07765 at 1799.239 kb on - strand, within CA264_07765 at 1799.263 kb on + strand, within CA264_07765 at 1799.264 kb on - strand, within CA264_07765
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 1,796,057 - CA264_07750 0.41 -1.5 1,796,062 - CA264_07750 0.42 -2.7 1,796,226 - CA264_07750 0.71 -1.8 1,796,226 - CA264_07750 0.71 -1.5 1,798,363 + -1.4 1,798,363 + +0.4 1,798,363 + +1.8 1,798,371 + +0.2 1,798,411 + -0.5 1,798,411 + -0.7 1,798,411 + +0.2 1,798,411 + +0.3 1,798,411 + -0.5 1,798,412 - +0.2 1,798,412 - +0.4 1,798,412 - +0.9 1,798,412 - +0.1 1,798,441 - -0.2 1,798,442 + -0.4 1,798,443 - -0.1 1,798,445 + -1.5 1,798,446 - +0.2 1,798,453 + +0.5 1,798,453 + -0.2 1,798,454 - -0.2 1,798,462 + -0.1 1,798,473 + -0.3 1,798,473 + +0.1 1,798,555 - -1.0 1,798,556 + +0.8 1,798,590 + +1.0 1,798,590 + +0.2 1,798,611 + -0.1 1,798,650 + -0.8 1,798,650 + +1.5 1,798,651 - +0.0 1,798,692 - CA264_07765 0.14 +0.7 1,798,700 + CA264_07765 0.15 -0.2 1,798,735 + CA264_07765 0.20 -0.4 1,798,814 + CA264_07765 0.29 -0.2 1,798,814 + CA264_07765 0.29 -0.8 1,798,815 - CA264_07765 0.29 +0.2 1,798,874 - CA264_07765 0.36 -0.1 1,798,874 - CA264_07765 0.36 +0.1 1,798,928 + CA264_07765 0.43 +0.4 1,798,957 + CA264_07765 0.46 +1.0 1,798,983 + CA264_07765 0.49 +1.7 1,799,015 + CA264_07765 0.53 +1.9 1,799,117 + CA264_07765 0.65 -0.7 1,799,165 + CA264_07765 0.71 -1.5 1,799,239 - CA264_07765 0.80 -0.1 1,799,263 + CA264_07765 0.83 +0.7 1,799,264 - CA264_07765 0.83 +0.8
Or see this region's nucleotide sequence