Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06085 and CA264_06090 are separated by 73 nucleotides CA264_06090 and CA264_06095 are separated by 23 nucleotides CA264_06095 and CA264_06100 are separated by 112 nucleotides CA264_06100 and CA264_06105 are separated by 210 nucleotides
CA264_06085: CA264_06085 - hypothetical protein, at 1,423,979 to 1,424,596
_06085
CA264_06090: CA264_06090 - hypothetical protein, at 1,424,670 to 1,425,131
_06090
CA264_06095: CA264_06095 - hypothetical protein, at 1,425,155 to 1,425,460
_06095
CA264_06100: CA264_06100 - riboflavin synthase, at 1,425,573 to 1,426,157
_06100
CA264_06105: CA264_06105 - protein-L-isoaspartate O-methyltransferase, at 1,426,368 to 1,427,027
_06105
Position (kb)
1425
1426
1427 Strain fitness (log2 ratio)
-2
-1
0
1 at 1424.613 kb on - strand at 1424.617 kb on + strand at 1424.626 kb on + strand at 1424.635 kb on + strand at 1424.642 kb on - strand at 1424.645 kb on + strand at 1424.664 kb on + strand at 1424.689 kb on + strand at 1424.690 kb on - strand at 1424.690 kb on - strand at 1424.690 kb on - strand at 1424.694 kb on + strand at 1424.726 kb on - strand, within CA264_06090 at 1424.851 kb on + strand, within CA264_06090 at 1424.934 kb on + strand, within CA264_06090 at 1424.935 kb on - strand, within CA264_06090 at 1424.937 kb on - strand, within CA264_06090 at 1425.047 kb on - strand, within CA264_06090 at 1425.050 kb on + strand, within CA264_06090 at 1425.050 kb on + strand, within CA264_06090 at 1425.051 kb on - strand at 1425.051 kb on - strand, within CA264_06090 at 1425.095 kb on - strand at 1425.304 kb on + strand, within CA264_06095 at 1425.377 kb on + strand, within CA264_06095 at 1425.463 kb on + strand at 1425.485 kb on + strand at 1425.486 kb on - strand at 1425.494 kb on + strand at 1425.583 kb on - strand at 1425.595 kb on - strand at 1426.157 kb on + strand at 1426.157 kb on + strand at 1426.329 kb on - strand at 1426.329 kb on - strand at 1426.329 kb on - strand at 1426.329 kb on - strand at 1426.334 kb on + strand at 1426.352 kb on + strand at 1426.352 kb on + strand at 1426.353 kb on - strand at 1426.356 kb on + strand at 1426.357 kb on - strand at 1426.357 kb on - strand at 1426.360 kb on + strand at 1426.617 kb on - strand, within CA264_06105 at 1426.674 kb on - strand, within CA264_06105 at 1426.698 kb on + strand, within CA264_06105 at 1426.881 kb on - strand, within CA264_06105 at 1427.025 kb on + strand at 1427.026 kb on - strand at 1427.100 kb on + strand at 1427.120 kb on - strand at 1427.122 kb on - strand at 1427.122 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 1,424,613 - -1.3 1,424,617 + -0.5 1,424,626 + +0.7 1,424,635 + -0.5 1,424,642 - +0.4 1,424,645 + -1.3 1,424,664 + +1.7 1,424,689 + +0.1 1,424,690 - -0.1 1,424,690 - -1.1 1,424,690 - +0.0 1,424,694 + +0.2 1,424,726 - CA264_06090 0.12 +1.6 1,424,851 + CA264_06090 0.39 +0.5 1,424,934 + CA264_06090 0.57 -0.2 1,424,935 - CA264_06090 0.57 -0.2 1,424,937 - CA264_06090 0.58 +0.2 1,425,047 - CA264_06090 0.82 -0.9 1,425,050 + CA264_06090 0.82 +0.9 1,425,050 + CA264_06090 0.82 +0.1 1,425,051 - -1.6 1,425,051 - CA264_06090 0.82 -0.1 1,425,095 - -0.6 1,425,304 + CA264_06095 0.49 -0.1 1,425,377 + CA264_06095 0.73 -2.1 1,425,463 + -1.3 1,425,485 + -0.6 1,425,486 - -0.6 1,425,494 + +0.9 1,425,583 - -0.6 1,425,595 - -0.5 1,426,157 + +0.2 1,426,157 + +1.0 1,426,329 - +0.3 1,426,329 - -0.5 1,426,329 - -0.5 1,426,329 - -0.1 1,426,334 + -0.1 1,426,352 + +0.1 1,426,352 + -0.1 1,426,353 - +0.0 1,426,356 + -0.1 1,426,357 - -0.6 1,426,357 - +0.1 1,426,360 + -0.1 1,426,617 - CA264_06105 0.38 -0.9 1,426,674 - CA264_06105 0.46 -1.5 1,426,698 + CA264_06105 0.50 -1.6 1,426,881 - CA264_06105 0.78 +0.1 1,427,025 + +1.3 1,427,026 - +0.0 1,427,100 + +0.5 1,427,120 - +0.8 1,427,122 - -0.0 1,427,122 - -0.9
Or see this region's nucleotide sequence