Experiment: m.b. benzoic 0.4 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02545 and CA264_02550 are separated by 116 nucleotides CA264_02550 and CA264_02555 are separated by 633 nucleotides
CA264_02545: CA264_02545 - sulfate adenylyltransferase small subunit, at 594,866 to 595,774
_02545
CA264_02550: CA264_02550 - phosphoadenosine phosphosulfate reductase, at 595,891 to 596,610
_02550
CA264_02555: CA264_02555 - hypothetical protein, at 597,244 to 597,963
_02555
Position (kb) 595
596
597 Strain fitness (log2 ratio) -2
-1
0
1
2 at 594.916 kb on + strand at 594.985 kb on + strand, within CA264_02545 at 595.147 kb on - strand, within CA264_02545 at 595.472 kb on + strand, within CA264_02545 at 595.797 kb on - strand at 595.810 kb on + strand at 595.832 kb on - strand at 595.841 kb on - strand at 595.864 kb on - strand at 595.888 kb on + strand at 595.892 kb on + strand at 595.893 kb on - strand at 596.066 kb on - strand, within CA264_02550 at 596.104 kb on - strand, within CA264_02550 at 596.615 kb on + strand at 596.623 kb on - strand at 596.623 kb on - strand at 596.667 kb on + strand at 596.667 kb on + strand at 596.669 kb on + strand at 596.670 kb on - strand at 596.708 kb on - strand at 596.723 kb on + strand at 596.723 kb on + strand at 596.789 kb on + strand at 596.790 kb on - strand at 596.904 kb on + strand at 596.905 kb on - strand at 596.905 kb on - strand at 596.912 kb on + strand at 596.913 kb on - strand at 596.913 kb on - strand at 596.975 kb on - strand at 596.980 kb on - strand at 597.010 kb on - strand at 597.115 kb on + strand at 597.190 kb on + strand at 597.271 kb on + strand at 597.376 kb on + strand, within CA264_02555 at 597.467 kb on + strand, within CA264_02555 at 597.467 kb on + strand, within CA264_02555 at 597.500 kb on + strand, within CA264_02555 at 597.500 kb on + strand, within CA264_02555 at 597.500 kb on + strand, within CA264_02555 at 597.501 kb on - strand, within CA264_02555 at 597.501 kb on - strand, within CA264_02555 at 597.501 kb on - strand, within CA264_02555 at 597.525 kb on - strand, within CA264_02555
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.4 mg/ml remove 594,916 + -0.7 594,985 + CA264_02545 0.13 -1.3 595,147 - CA264_02545 0.31 +0.9 595,472 + CA264_02545 0.67 -2.3 595,797 - -0.1 595,810 + +0.6 595,832 - +0.3 595,841 - +2.4 595,864 - +0.3 595,888 + -0.7 595,892 + -0.3 595,893 - -0.7 596,066 - CA264_02550 0.24 -1.1 596,104 - CA264_02550 0.30 -0.1 596,615 + -0.6 596,623 - -1.0 596,623 - -0.4 596,667 + +0.2 596,667 + +0.3 596,669 + +2.2 596,670 - -0.1 596,708 - -0.3 596,723 + -0.4 596,723 + -0.1 596,789 + -0.2 596,790 - -0.1 596,904 + +0.2 596,905 - -0.1 596,905 - +0.5 596,912 + -0.7 596,913 - -1.3 596,913 - +0.1 596,975 - +1.9 596,980 - -0.1 597,010 - -0.4 597,115 + -1.1 597,190 + -0.6 597,271 + +0.1 597,376 + CA264_02555 0.18 -0.7 597,467 + CA264_02555 0.31 +0.4 597,467 + CA264_02555 0.31 -0.7 597,500 + CA264_02555 0.36 -0.7 597,500 + CA264_02555 0.36 +0.5 597,500 + CA264_02555 0.36 -0.2 597,501 - CA264_02555 0.36 +0.7 597,501 - CA264_02555 0.36 +0.3 597,501 - CA264_02555 0.36 -0.1 597,525 - CA264_02555 0.39 +1.4
Or see this region's nucleotide sequence