Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3303 and PfGW456L13_3304 overlap by 4 nucleotides PfGW456L13_3304 and PfGW456L13_3305 overlap by 4 nucleotides
PfGW456L13_3303 - BatA (Bacteroides aerotolerance operon), at 3,711,428 to 3,712,510
_3303
PfGW456L13_3304 - TPR domain protein in aerotolerance operon, at 3,712,507 to 3,714,240
_3304
PfGW456L13_3305 - BatD, at 3,714,237 to 3,715,886
_3305
Position (kb)
3712
3713
3714
3715 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.615 kb on + strand, within PfGW456L13_3303 at 3711.864 kb on - strand, within PfGW456L13_3303 at 3711.864 kb on - strand, within PfGW456L13_3303 at 3712.229 kb on + strand, within PfGW456L13_3303 at 3712.229 kb on + strand, within PfGW456L13_3303 at 3712.230 kb on - strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.337 kb on + strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.338 kb on - strand, within PfGW456L13_3303 at 3712.681 kb on - strand, within PfGW456L13_3304 at 3712.921 kb on + strand, within PfGW456L13_3304 at 3712.922 kb on - strand, within PfGW456L13_3304 at 3713.533 kb on + strand, within PfGW456L13_3304 at 3713.534 kb on - strand, within PfGW456L13_3304 at 3713.534 kb on - strand, within PfGW456L13_3304 at 3713.589 kb on - strand, within PfGW456L13_3304 at 3713.589 kb on - strand, within PfGW456L13_3304 at 3713.589 kb on - strand, within PfGW456L13_3304 at 3713.660 kb on - strand, within PfGW456L13_3304 at 3713.726 kb on - strand, within PfGW456L13_3304 at 3713.726 kb on - strand, within PfGW456L13_3304 at 3713.782 kb on + strand, within PfGW456L13_3304 at 3713.782 kb on + strand, within PfGW456L13_3304 at 3713.868 kb on + strand, within PfGW456L13_3304 at 3713.868 kb on + strand, within PfGW456L13_3304 at 3713.869 kb on - strand, within PfGW456L13_3304 at 3713.869 kb on - strand, within PfGW456L13_3304 at 3714.199 kb on + strand at 3714.257 kb on - strand at 3714.257 kb on - strand at 3714.678 kb on + strand, within PfGW456L13_3305 at 3714.678 kb on + strand, within PfGW456L13_3305 at 3714.678 kb on + strand, within PfGW456L13_3305 at 3714.678 kb on + strand, within PfGW456L13_3305 at 3714.678 kb on + strand, within PfGW456L13_3305 at 3714.733 kb on - strand, within PfGW456L13_3305 at 3714.804 kb on + strand, within PfGW456L13_3305 at 3714.805 kb on - strand, within PfGW456L13_3305 at 3714.805 kb on - strand at 3714.934 kb on + strand, within PfGW456L13_3305 at 3715.026 kb on + strand, within PfGW456L13_3305 at 3715.027 kb on - strand, within PfGW456L13_3305
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 3,711,615 + PfGW456L13_3303 0.17 -1.5 3,711,615 + PfGW456L13_3303 0.17 -3.1 3,711,615 + PfGW456L13_3303 0.17 -2.8 3,711,615 + PfGW456L13_3303 0.17 -3.0 3,711,615 + PfGW456L13_3303 0.17 -1.7 3,711,864 - PfGW456L13_3303 0.40 -4.2 3,711,864 - PfGW456L13_3303 0.40 -1.0 3,712,229 + PfGW456L13_3303 0.74 -2.7 3,712,229 + PfGW456L13_3303 0.74 -3.4 3,712,230 - PfGW456L13_3303 0.74 -0.7 3,712,337 + PfGW456L13_3303 0.84 -1.0 3,712,337 + PfGW456L13_3303 0.84 -1.6 3,712,337 + PfGW456L13_3303 0.84 -3.4 3,712,337 + PfGW456L13_3303 0.84 -3.0 3,712,337 + PfGW456L13_3303 0.84 -0.5 3,712,338 - PfGW456L13_3303 0.84 -2.5 3,712,338 - PfGW456L13_3303 0.84 -3.1 3,712,338 - PfGW456L13_3303 0.84 -3.3 3,712,338 - PfGW456L13_3303 0.84 -3.5 3,712,338 - PfGW456L13_3303 0.84 -1.5 3,712,338 - PfGW456L13_3303 0.84 -2.6 3,712,681 - PfGW456L13_3304 0.10 -3.1 3,712,921 + PfGW456L13_3304 0.24 -1.7 3,712,922 - PfGW456L13_3304 0.24 -0.1 3,713,533 + PfGW456L13_3304 0.59 -1.6 3,713,534 - PfGW456L13_3304 0.59 -2.5 3,713,534 - PfGW456L13_3304 0.59 -2.4 3,713,589 - PfGW456L13_3304 0.62 -2.6 3,713,589 - PfGW456L13_3304 0.62 -3.4 3,713,589 - PfGW456L13_3304 0.62 -3.0 3,713,660 - PfGW456L13_3304 0.66 -2.5 3,713,726 - PfGW456L13_3304 0.70 -3.7 3,713,726 - PfGW456L13_3304 0.70 -4.6 3,713,782 + PfGW456L13_3304 0.74 -1.3 3,713,782 + PfGW456L13_3304 0.74 -2.5 3,713,868 + PfGW456L13_3304 0.78 -2.6 3,713,868 + PfGW456L13_3304 0.78 -3.1 3,713,869 - PfGW456L13_3304 0.79 -2.6 3,713,869 - PfGW456L13_3304 0.79 -2.5 3,714,199 + -1.5 3,714,257 - -1.5 3,714,257 - -0.7 3,714,678 + PfGW456L13_3305 0.27 -1.5 3,714,678 + PfGW456L13_3305 0.27 -1.7 3,714,678 + PfGW456L13_3305 0.27 -3.8 3,714,678 + PfGW456L13_3305 0.27 -1.8 3,714,678 + PfGW456L13_3305 0.27 -3.1 3,714,733 - PfGW456L13_3305 0.30 -3.1 3,714,804 + PfGW456L13_3305 0.34 -2.0 3,714,805 - PfGW456L13_3305 0.34 -1.5 3,714,805 - -0.1 3,714,934 + PfGW456L13_3305 0.42 -2.1 3,715,026 + PfGW456L13_3305 0.48 -1.7 3,715,027 - PfGW456L13_3305 0.48 -2.7
Or see this region's nucleotide sequence