Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3274 and PfGW456L13_3275 overlap by 4 nucleotides PfGW456L13_3275 and PfGW456L13_3276 overlap by 14 nucleotides PfGW456L13_3276 and PfGW456L13_3277 are separated by 1 nucleotides
PfGW456L13_3274 - hypothetical protein PA3071, at 3,677,855 to 3,678,790
_3274
PfGW456L13_3275 - FIG00985226: hypothetical protein, at 3,678,787 to 3,679,353
_3275
PfGW456L13_3276 - BatA (Bacteroides aerotolerance operon), at 3,679,340 to 3,680,332
_3276
PfGW456L13_3277 - TPR domain protein in aerotolerance operon, at 3,680,334 to 3,681,914
_3277
Position (kb)
3679
3680
3681 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3678.522 kb on + strand, within PfGW456L13_3274 at 3678.522 kb on + strand, within PfGW456L13_3274 at 3678.522 kb on + strand, within PfGW456L13_3274 at 3678.522 kb on + strand at 3678.522 kb on + strand, within PfGW456L13_3274 at 3678.522 kb on + strand, within PfGW456L13_3274 at 3678.522 kb on + strand, within PfGW456L13_3274 at 3678.522 kb on + strand, within PfGW456L13_3274 at 3678.522 kb on + strand, within PfGW456L13_3274 at 3678.523 kb on - strand, within PfGW456L13_3274 at 3678.523 kb on - strand, within PfGW456L13_3274 at 3678.523 kb on - strand, within PfGW456L13_3274 at 3678.523 kb on - strand, within PfGW456L13_3274 at 3678.523 kb on - strand, within PfGW456L13_3274 at 3678.523 kb on - strand, within PfGW456L13_3274 at 3678.523 kb on - strand at 3678.523 kb on - strand, within PfGW456L13_3274 at 3678.523 kb on - strand at 3678.539 kb on + strand, within PfGW456L13_3274 at 3678.539 kb on + strand, within PfGW456L13_3274 at 3678.539 kb on + strand, within PfGW456L13_3274 at 3678.540 kb on - strand, within PfGW456L13_3274 at 3678.540 kb on - strand, within PfGW456L13_3274 at 3678.540 kb on - strand, within PfGW456L13_3274 at 3678.540 kb on - strand, within PfGW456L13_3274 at 3678.540 kb on - strand, within PfGW456L13_3274 at 3678.557 kb on - strand, within PfGW456L13_3274 at 3678.798 kb on + strand at 3678.799 kb on - strand at 3678.850 kb on + strand, within PfGW456L13_3275 at 3678.850 kb on + strand, within PfGW456L13_3275 at 3678.850 kb on + strand, within PfGW456L13_3275 at 3678.850 kb on + strand, within PfGW456L13_3275 at 3678.850 kb on + strand, within PfGW456L13_3275 at 3678.851 kb on - strand, within PfGW456L13_3275 at 3678.851 kb on - strand, within PfGW456L13_3275 at 3678.999 kb on + strand at 3679.056 kb on + strand, within PfGW456L13_3275 at 3679.063 kb on + strand, within PfGW456L13_3275 at 3679.204 kb on - strand, within PfGW456L13_3275 at 3679.204 kb on - strand, within PfGW456L13_3275 at 3679.252 kb on + strand, within PfGW456L13_3275 at 3679.416 kb on - strand at 3679.444 kb on - strand, within PfGW456L13_3276 at 3679.741 kb on + strand, within PfGW456L13_3276 at 3679.741 kb on + strand, within PfGW456L13_3276 at 3679.742 kb on - strand, within PfGW456L13_3276 at 3679.742 kb on - strand, within PfGW456L13_3276 at 3679.742 kb on - strand, within PfGW456L13_3276 at 3679.828 kb on - strand, within PfGW456L13_3276 at 3680.159 kb on + strand, within PfGW456L13_3276 at 3680.159 kb on + strand, within PfGW456L13_3276 at 3680.160 kb on - strand, within PfGW456L13_3276 at 3680.270 kb on + strand at 3680.533 kb on + strand, within PfGW456L13_3277 at 3680.533 kb on + strand, within PfGW456L13_3277 at 3680.533 kb on + strand, within PfGW456L13_3277 at 3680.534 kb on - strand, within PfGW456L13_3277 at 3680.534 kb on - strand, within PfGW456L13_3277 at 3680.534 kb on - strand, within PfGW456L13_3277 at 3680.534 kb on - strand, within PfGW456L13_3277 at 3680.534 kb on - strand, within PfGW456L13_3277 at 3680.534 kb on - strand, within PfGW456L13_3277 at 3680.534 kb on - strand, within PfGW456L13_3277 at 3681.305 kb on - strand, within PfGW456L13_3277 at 3681.305 kb on - strand, within PfGW456L13_3277
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 3,678,522 + PfGW456L13_3274 0.71 -1.2 3,678,522 + PfGW456L13_3274 0.71 +1.1 3,678,522 + PfGW456L13_3274 0.71 -0.4 3,678,522 + +0.9 3,678,522 + PfGW456L13_3274 0.71 -0.6 3,678,522 + PfGW456L13_3274 0.71 +1.3 3,678,522 + PfGW456L13_3274 0.71 -0.1 3,678,522 + PfGW456L13_3274 0.71 -1.1 3,678,522 + PfGW456L13_3274 0.71 +0.8 3,678,523 - PfGW456L13_3274 0.71 -1.0 3,678,523 - PfGW456L13_3274 0.71 -0.4 3,678,523 - PfGW456L13_3274 0.71 -0.8 3,678,523 - PfGW456L13_3274 0.71 +0.9 3,678,523 - PfGW456L13_3274 0.71 -0.1 3,678,523 - PfGW456L13_3274 0.71 -0.1 3,678,523 - -1.5 3,678,523 - PfGW456L13_3274 0.71 -0.8 3,678,523 - +1.9 3,678,539 + PfGW456L13_3274 0.73 +0.9 3,678,539 + PfGW456L13_3274 0.73 +0.9 3,678,539 + PfGW456L13_3274 0.73 -3.7 3,678,540 - PfGW456L13_3274 0.73 -0.1 3,678,540 - PfGW456L13_3274 0.73 -0.1 3,678,540 - PfGW456L13_3274 0.73 -0.4 3,678,540 - PfGW456L13_3274 0.73 -0.1 3,678,540 - PfGW456L13_3274 0.73 -1.6 3,678,557 - PfGW456L13_3274 0.75 +0.1 3,678,798 + -0.6 3,678,799 - -0.1 3,678,850 + PfGW456L13_3275 0.11 +0.1 3,678,850 + PfGW456L13_3275 0.11 +0.1 3,678,850 + PfGW456L13_3275 0.11 -0.5 3,678,850 + PfGW456L13_3275 0.11 -0.3 3,678,850 + PfGW456L13_3275 0.11 -0.3 3,678,851 - PfGW456L13_3275 0.11 -0.1 3,678,851 - PfGW456L13_3275 0.11 -0.0 3,678,999 + +0.9 3,679,056 + PfGW456L13_3275 0.47 -0.5 3,679,063 + PfGW456L13_3275 0.49 -0.2 3,679,204 - PfGW456L13_3275 0.74 -2.3 3,679,204 - PfGW456L13_3275 0.74 -0.8 3,679,252 + PfGW456L13_3275 0.82 -0.2 3,679,416 - +0.5 3,679,444 - PfGW456L13_3276 0.10 -0.5 3,679,741 + PfGW456L13_3276 0.40 -0.8 3,679,741 + PfGW456L13_3276 0.40 +0.2 3,679,742 - PfGW456L13_3276 0.40 -0.1 3,679,742 - PfGW456L13_3276 0.40 +0.4 3,679,742 - PfGW456L13_3276 0.40 +0.3 3,679,828 - PfGW456L13_3276 0.49 -0.4 3,680,159 + PfGW456L13_3276 0.82 -0.7 3,680,159 + PfGW456L13_3276 0.82 -0.4 3,680,160 - PfGW456L13_3276 0.83 -1.1 3,680,270 + +0.7 3,680,533 + PfGW456L13_3277 0.13 -0.5 3,680,533 + PfGW456L13_3277 0.13 -0.1 3,680,533 + PfGW456L13_3277 0.13 -0.1 3,680,534 - PfGW456L13_3277 0.13 +0.3 3,680,534 - PfGW456L13_3277 0.13 -0.4 3,680,534 - PfGW456L13_3277 0.13 -0.5 3,680,534 - PfGW456L13_3277 0.13 -0.3 3,680,534 - PfGW456L13_3277 0.13 +0.7 3,680,534 - PfGW456L13_3277 0.13 -0.4 3,680,534 - PfGW456L13_3277 0.13 +0.5 3,681,305 - PfGW456L13_3277 0.61 +0.1 3,681,305 - PfGW456L13_3277 0.61 +0.1
Or see this region's nucleotide sequence