Experiment: Benzethonium chloride 0.0125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2843 and PfGW456L13_2844 are separated by 523 nucleotides PfGW456L13_2844 and PfGW456L13_2845 are separated by 6 nucleotides PfGW456L13_2845 and PfGW456L13_2846 are separated by 271 nucleotides
PfGW456L13_2843 - Sulfite reductase [NADPH] hemoprotein beta-component (EC 1.8.1.2), at 3,151,969 to 3,153,627
_2843
PfGW456L13_2844 - Periplasmic sugar-binding domain protein, at 3,154,151 to 3,155,236
_2844
PfGW456L13_2845 - FIG00953703: hypothetical protein, at 3,155,243 to 3,155,461
_2845
PfGW456L13_2846 - hypothetical protein, at 3,155,733 to 3,162,215
_2846
Position (kb)
3154
3155
3156 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3153.383 kb on + strand, within PfGW456L13_2843 at 3153.383 kb on + strand, within PfGW456L13_2843 at 3153.384 kb on - strand, within PfGW456L13_2843 at 3153.384 kb on - strand, within PfGW456L13_2843 at 3153.472 kb on - strand at 3153.489 kb on + strand at 3153.490 kb on - strand at 3153.490 kb on - strand at 3153.490 kb on - strand at 3153.490 kb on - strand at 3153.491 kb on + strand at 3153.491 kb on + strand at 3153.491 kb on + strand at 3153.491 kb on + strand at 3153.491 kb on + strand at 3153.491 kb on + strand at 3153.491 kb on + strand at 3153.492 kb on - strand at 3153.492 kb on - strand at 3153.492 kb on - strand at 3153.492 kb on - strand at 3153.492 kb on - strand at 3153.492 kb on - strand at 3153.492 kb on - strand at 3153.551 kb on + strand at 3153.608 kb on + strand at 3153.608 kb on + strand at 3153.617 kb on + strand at 3153.617 kb on + strand at 3153.617 kb on + strand at 3153.617 kb on + strand at 3153.618 kb on - strand at 3153.618 kb on - strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.619 kb on + strand at 3153.620 kb on - strand at 3153.620 kb on - strand at 3153.620 kb on - strand at 3153.620 kb on - strand at 3153.620 kb on - strand at 3153.620 kb on - strand at 3153.620 kb on - strand at 3153.620 kb on - strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.623 kb on + strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.624 kb on - strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.627 kb on + strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.628 kb on - strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.629 kb on + strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.630 kb on - strand at 3153.695 kb on - strand at 3153.697 kb on + strand at 3153.697 kb on + strand at 3153.697 kb on + strand at 3153.697 kb on + strand at 3153.697 kb on + strand at 3153.697 kb on + strand at 3153.697 kb on + strand at 3153.698 kb on - strand at 3153.698 kb on - strand at 3153.753 kb on - strand at 3153.795 kb on + strand at 3153.796 kb on - strand at 3153.828 kb on + strand at 3153.829 kb on - strand at 3153.867 kb on + strand at 3153.867 kb on + strand at 3153.868 kb on - strand at 3153.884 kb on + strand at 3153.885 kb on - strand at 3154.033 kb on - strand at 3154.096 kb on + strand at 3154.116 kb on - strand at 3154.116 kb on - strand at 3154.116 kb on - strand at 3154.164 kb on + strand at 3154.164 kb on + strand at 3154.164 kb on + strand at 3154.165 kb on - strand at 3154.173 kb on + strand at 3154.173 kb on + strand at 3154.174 kb on - strand at 3154.174 kb on - strand at 3154.176 kb on + strand at 3154.271 kb on + strand, within PfGW456L13_2844 at 3154.401 kb on - strand, within PfGW456L13_2844 at 3154.757 kb on + strand, within PfGW456L13_2844 at 3154.757 kb on + strand, within PfGW456L13_2844 at 3154.784 kb on + strand, within PfGW456L13_2844 at 3154.785 kb on - strand, within PfGW456L13_2844 at 3154.877 kb on + strand, within PfGW456L13_2844 at 3154.877 kb on + strand, within PfGW456L13_2844 at 3154.877 kb on + strand, within PfGW456L13_2844 at 3154.877 kb on + strand, within PfGW456L13_2844 at 3154.877 kb on + strand, within PfGW456L13_2844 at 3154.877 kb on + strand, within PfGW456L13_2844 at 3154.877 kb on + strand, within PfGW456L13_2844 at 3155.300 kb on + strand, within PfGW456L13_2845 at 3155.300 kb on + strand, within PfGW456L13_2845 at 3155.300 kb on + strand, within PfGW456L13_2845 at 3155.461 kb on + strand at 3155.461 kb on + strand at 3155.462 kb on - strand at 3155.480 kb on + strand at 3155.480 kb on + strand at 3155.480 kb on + strand at 3155.495 kb on + strand at 3155.495 kb on + strand at 3155.495 kb on + strand at 3155.495 kb on + strand at 3155.495 kb on + strand at 3155.496 kb on - strand at 3155.496 kb on - strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.573 kb on + strand at 3155.574 kb on - strand at 3155.574 kb on - strand at 3155.574 kb on - strand at 3155.574 kb on - strand at 3155.574 kb on - strand at 3155.574 kb on - strand at 3155.574 kb on - strand at 3155.574 kb on - strand at 3155.574 kb on - strand at 3155.577 kb on + strand at 3155.577 kb on + strand at 3155.577 kb on + strand at 3155.577 kb on + strand at 3155.577 kb on + strand at 3155.578 kb on - strand at 3155.578 kb on - strand at 3155.578 kb on - strand at 3155.586 kb on + strand at 3155.587 kb on - strand at 3155.587 kb on - strand at 3155.587 kb on - strand at 3155.707 kb on + strand at 3155.707 kb on + strand at 3155.707 kb on + strand at 3155.707 kb on + strand at 3155.708 kb on - strand at 3155.708 kb on - strand at 3155.708 kb on - strand at 3155.708 kb on - strand at 3155.708 kb on - strand at 3155.767 kb on + strand at 3155.768 kb on - strand at 3155.799 kb on + strand at 3155.799 kb on + strand at 3155.800 kb on - strand at 3156.080 kb on + strand at 3156.080 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzethonium chloride 0.0125 mM remove 3,153,383 + PfGW456L13_2843 0.85 +0.3 3,153,383 + PfGW456L13_2843 0.85 +1.1 3,153,384 - PfGW456L13_2843 0.85 -1.1 3,153,384 - PfGW456L13_2843 0.85 +0.2 3,153,472 - -0.4 3,153,489 + -0.8 3,153,490 - -0.2 3,153,490 - -0.4 3,153,490 - -0.9 3,153,490 - +1.4 3,153,491 + +0.5 3,153,491 + -1.4 3,153,491 + +0.2 3,153,491 + -0.2 3,153,491 + -0.6 3,153,491 + -3.5 3,153,491 + +0.3 3,153,492 - -0.1 3,153,492 - +0.5 3,153,492 - -0.0 3,153,492 - +0.0 3,153,492 - -1.4 3,153,492 - -1.3 3,153,492 - +1.3 3,153,551 + -1.0 3,153,608 + -1.1 3,153,608 + +1.1 3,153,617 + -0.6 3,153,617 + -0.7 3,153,617 + -0.5 3,153,617 + -0.2 3,153,618 - -0.3 3,153,618 - +1.0 3,153,619 + +0.6 3,153,619 + +1.2 3,153,619 + +0.3 3,153,619 + -1.7 3,153,619 + -0.5 3,153,619 + -0.0 3,153,619 + -0.6 3,153,619 + -0.3 3,153,619 + +0.5 3,153,619 + -0.4 3,153,619 + -1.3 3,153,620 - +1.0 3,153,620 - +0.4 3,153,620 - -0.6 3,153,620 - -1.1 3,153,620 - +1.0 3,153,620 - -0.8 3,153,620 - +0.3 3,153,620 - -0.9 3,153,623 + +0.0 3,153,623 + +0.1 3,153,623 + -0.6 3,153,623 + +0.3 3,153,623 + +0.2 3,153,623 + +0.0 3,153,623 + -0.8 3,153,623 + +0.5 3,153,623 + -1.9 3,153,623 + -0.3 3,153,623 + +1.4 3,153,623 + -2.0 3,153,623 + -0.6 3,153,623 + -0.4 3,153,623 + -1.4 3,153,623 + +0.2 3,153,623 + +0.2 3,153,623 + -0.1 3,153,623 + -0.2 3,153,623 + -0.4 3,153,624 - -0.8 3,153,624 - +0.9 3,153,624 - -1.2 3,153,624 - +0.2 3,153,624 - -0.8 3,153,624 - -0.0 3,153,624 - +0.7 3,153,624 - +0.8 3,153,624 - +0.6 3,153,624 - +0.7 3,153,624 - +0.2 3,153,624 - +0.3 3,153,624 - -0.1 3,153,624 - -1.4 3,153,624 - +0.7 3,153,624 - -1.4 3,153,624 - -0.1 3,153,624 - -0.3 3,153,624 - +0.7 3,153,627 + -0.4 3,153,627 + -0.6 3,153,627 + -0.9 3,153,627 + +0.4 3,153,627 + -0.4 3,153,627 + -0.2 3,153,627 + -0.6 3,153,627 + -1.1 3,153,627 + +0.1 3,153,627 + -0.1 3,153,627 + -0.2 3,153,627 + -0.9 3,153,627 + -1.3 3,153,627 + -0.2 3,153,627 + +0.4 3,153,627 + -0.1 3,153,627 + -0.8 3,153,627 + -0.8 3,153,627 + -0.1 3,153,627 + -0.7 3,153,627 + -0.9 3,153,627 + -0.6 3,153,627 + -0.7 3,153,627 + +0.1 3,153,627 + +0.1 3,153,627 + +0.3 3,153,627 + +0.3 3,153,627 + -0.7 3,153,627 + -0.4 3,153,627 + -0.5 3,153,627 + -0.3 3,153,627 + -0.4 3,153,627 + -0.6 3,153,627 + -1.2 3,153,628 - -0.7 3,153,628 - +1.9 3,153,628 - -0.3 3,153,628 - -1.1 3,153,628 - -1.0 3,153,628 - -1.9 3,153,628 - -0.6 3,153,628 - -0.0 3,153,628 - +0.4 3,153,628 - -0.7 3,153,628 - -1.2 3,153,628 - +1.1 3,153,628 - -0.0 3,153,628 - +0.2 3,153,628 - -0.2 3,153,628 - -0.0 3,153,628 - -1.4 3,153,628 - +2.0 3,153,628 - +1.8 3,153,628 - +0.5 3,153,628 - +0.9 3,153,628 - -2.7 3,153,628 - -0.5 3,153,628 - +1.8 3,153,628 - +0.9 3,153,628 - +0.5 3,153,628 - +1.3 3,153,628 - +0.0 3,153,628 - +0.3 3,153,628 - +1.1 3,153,628 - -0.9 3,153,628 - +0.1 3,153,628 - +0.3 3,153,628 - -0.9 3,153,628 - -0.5 3,153,628 - -1.2 3,153,629 + -0.8 3,153,629 + -0.7 3,153,629 + +0.3 3,153,629 + +0.3 3,153,629 + -0.6 3,153,629 + +0.6 3,153,629 + +0.1 3,153,629 + -0.4 3,153,629 + +0.1 3,153,629 + +0.1 3,153,629 + -0.6 3,153,629 + -0.5 3,153,629 + -0.4 3,153,629 + +0.6 3,153,629 + -0.1 3,153,629 + +0.2 3,153,629 + -1.0 3,153,629 + -1.3 3,153,629 + -0.7 3,153,629 + -0.7 3,153,629 + -0.4 3,153,629 + -0.1 3,153,629 + -1.7 3,153,630 - -0.8 3,153,630 - +2.9 3,153,630 - -0.8 3,153,630 - +0.7 3,153,630 - -0.6 3,153,630 - -0.2 3,153,630 - -0.1 3,153,630 - -0.5 3,153,630 - -0.4 3,153,630 - -1.4 3,153,630 - -1.2 3,153,630 - -0.8 3,153,630 - -1.1 3,153,630 - +0.3 3,153,630 - -0.5 3,153,630 - -0.2 3,153,630 - -1.0 3,153,630 - -0.4 3,153,630 - -1.4 3,153,630 - -0.7 3,153,630 - -0.3 3,153,695 - -0.9 3,153,697 + -1.8 3,153,697 + -1.4 3,153,697 + +0.3 3,153,697 + +0.3 3,153,697 + -0.2 3,153,697 + -1.4 3,153,697 + -0.1 3,153,698 - +0.5 3,153,698 - +0.9 3,153,753 - -0.7 3,153,795 + -0.3 3,153,796 - -0.6 3,153,828 + +1.3 3,153,829 - -0.6 3,153,867 + +0.4 3,153,867 + -0.1 3,153,868 - +0.0 3,153,884 + +0.4 3,153,885 - +0.5 3,154,033 - +1.0 3,154,096 + +1.2 3,154,116 - +0.4 3,154,116 - -0.7 3,154,116 - +0.8 3,154,164 + +0.8 3,154,164 + +1.9 3,154,164 + +0.6 3,154,165 - +0.7 3,154,173 + +0.3 3,154,173 + +0.7 3,154,174 - +0.6 3,154,174 - +0.0 3,154,176 + +0.9 3,154,271 + PfGW456L13_2844 0.11 +0.3 3,154,401 - PfGW456L13_2844 0.23 +0.3 3,154,757 + PfGW456L13_2844 0.56 -0.2 3,154,757 + PfGW456L13_2844 0.56 +0.9 3,154,784 + PfGW456L13_2844 0.58 +0.3 3,154,785 - PfGW456L13_2844 0.58 -0.1 3,154,877 + PfGW456L13_2844 0.67 +0.6 3,154,877 + PfGW456L13_2844 0.67 +0.5 3,154,877 + PfGW456L13_2844 0.67 -1.1 3,154,877 + PfGW456L13_2844 0.67 +1.7 3,154,877 + PfGW456L13_2844 0.67 -1.3 3,154,877 + PfGW456L13_2844 0.67 -0.6 3,154,877 + PfGW456L13_2844 0.67 -1.2 3,155,300 + PfGW456L13_2845 0.26 -0.2 3,155,300 + PfGW456L13_2845 0.26 -2.8 3,155,300 + PfGW456L13_2845 0.26 -2.1 3,155,461 + +0.3 3,155,461 + -0.1 3,155,462 - -0.6 3,155,480 + -0.7 3,155,480 + -0.6 3,155,480 + -0.2 3,155,495 + -0.4 3,155,495 + -0.2 3,155,495 + -1.0 3,155,495 + -0.1 3,155,495 + -0.4 3,155,496 - +1.7 3,155,496 - +0.7 3,155,573 + -0.1 3,155,573 + -0.1 3,155,573 + +0.3 3,155,573 + +0.6 3,155,573 + +0.1 3,155,573 + +0.6 3,155,573 + +0.2 3,155,573 + +0.4 3,155,573 + -1.4 3,155,573 + -0.9 3,155,573 + +0.1 3,155,574 - -0.5 3,155,574 - +0.1 3,155,574 - +0.2 3,155,574 - -0.8 3,155,574 - +0.1 3,155,574 - -2.1 3,155,574 - -0.6 3,155,574 - -0.7 3,155,574 - -0.2 3,155,577 + -1.1 3,155,577 + -1.4 3,155,577 + +1.4 3,155,577 + -0.8 3,155,577 + -0.4 3,155,578 - +1.4 3,155,578 - -1.2 3,155,578 - -0.5 3,155,586 + +0.2 3,155,587 - +0.7 3,155,587 - +0.3 3,155,587 - -0.1 3,155,707 + +0.2 3,155,707 + +0.5 3,155,707 + -0.1 3,155,707 + -1.0 3,155,708 - -0.7 3,155,708 - -0.3 3,155,708 - -1.1 3,155,708 - -1.4 3,155,708 - +0.4 3,155,767 + +0.2 3,155,768 - +0.9 3,155,799 + -1.9 3,155,799 + -0.3 3,155,800 - +0.3 3,156,080 + -0.1 3,156,080 + -2.0
Or see this region's nucleotide sequence