Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_03235 and PS417_03240 are separated by 88 nucleotides PS417_03240 and PS417_03245 are separated by 125 nucleotides
PS417_03235: PS417_03235 - xanthine permease XanP, at 738,510 to 739,904
_03235
PS417_03240: PS417_03240 - LysR family transcriptional regulator, at 739,993 to 740,913
_03240
PS417_03245: PS417_03245 - omega amino acid--pyruvate aminotransferase, at 741,039 to 742,388
_03245
Position (kb) 739
740
741 Strain fitness (log2 ratio) -2
-1
0
1 at 739.026 kb on - strand, within PS417_03235 at 739.035 kb on + strand, within PS417_03235 at 739.035 kb on + strand, within PS417_03235 at 739.036 kb on - strand, within PS417_03235 at 739.037 kb on + strand, within PS417_03235 at 739.037 kb on + strand, within PS417_03235 at 739.038 kb on - strand, within PS417_03235 at 739.038 kb on - strand, within PS417_03235 at 739.038 kb on - strand, within PS417_03235 at 739.038 kb on - strand, within PS417_03235 at 739.039 kb on + strand, within PS417_03235 at 739.039 kb on + strand, within PS417_03235 at 739.039 kb on + strand, within PS417_03235 at 739.040 kb on - strand, within PS417_03235 at 739.040 kb on - strand, within PS417_03235 at 739.040 kb on - strand, within PS417_03235 at 739.109 kb on + strand, within PS417_03235 at 739.121 kb on - strand, within PS417_03235 at 739.332 kb on + strand, within PS417_03235 at 739.333 kb on - strand, within PS417_03235 at 739.695 kb on - strand, within PS417_03235 at 739.698 kb on + strand, within PS417_03235 at 739.698 kb on + strand, within PS417_03235 at 739.698 kb on + strand, within PS417_03235 at 739.733 kb on - strand, within PS417_03235 at 739.809 kb on + strand at 739.868 kb on - strand at 739.868 kb on - strand at 740.240 kb on + strand, within PS417_03240 at 740.240 kb on + strand, within PS417_03240 at 740.323 kb on - strand, within PS417_03240 at 740.333 kb on + strand, within PS417_03240 at 740.334 kb on - strand, within PS417_03240 at 740.440 kb on + strand, within PS417_03240 at 740.440 kb on + strand, within PS417_03240 at 740.440 kb on + strand, within PS417_03240 at 740.441 kb on - strand, within PS417_03240 at 740.659 kb on + strand, within PS417_03240 at 740.659 kb on + strand, within PS417_03240 at 740.659 kb on + strand, within PS417_03240 at 740.659 kb on + strand, within PS417_03240 at 740.737 kb on + strand, within PS417_03240 at 740.913 kb on + strand at 740.981 kb on + strand at 740.981 kb on + strand at 741.122 kb on + strand at 741.165 kb on - strand at 741.439 kb on - strand, within PS417_03245 at 741.439 kb on - strand, within PS417_03245 at 741.448 kb on + strand, within PS417_03245 at 741.548 kb on + strand, within PS417_03245 at 741.549 kb on - strand, within PS417_03245 at 741.549 kb on - strand, within PS417_03245 at 741.549 kb on - strand, within PS417_03245 at 741.593 kb on + strand, within PS417_03245 at 741.593 kb on + strand, within PS417_03245 at 741.593 kb on + strand, within PS417_03245 at 741.594 kb on - strand, within PS417_03245 at 741.594 kb on - strand, within PS417_03245 at 741.594 kb on - strand, within PS417_03245 at 741.806 kb on - strand, within PS417_03245 at 741.806 kb on - strand, within PS417_03245
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 739,026 - PS417_03235 0.37 -0.3 739,035 + PS417_03235 0.38 +0.5 739,035 + PS417_03235 0.38 -1.1 739,036 - PS417_03235 0.38 +0.3 739,037 + PS417_03235 0.38 -0.1 739,037 + PS417_03235 0.38 -0.5 739,038 - PS417_03235 0.38 +0.7 739,038 - PS417_03235 0.38 +0.3 739,038 - PS417_03235 0.38 +0.2 739,038 - PS417_03235 0.38 +0.3 739,039 + PS417_03235 0.38 +0.5 739,039 + PS417_03235 0.38 +0.6 739,039 + PS417_03235 0.38 -0.5 739,040 - PS417_03235 0.38 +0.2 739,040 - PS417_03235 0.38 -0.4 739,040 - PS417_03235 0.38 -0.2 739,109 + PS417_03235 0.43 +0.1 739,121 - PS417_03235 0.44 -0.7 739,332 + PS417_03235 0.59 -0.0 739,333 - PS417_03235 0.59 -0.4 739,695 - PS417_03235 0.85 +0.1 739,698 + PS417_03235 0.85 +0.3 739,698 + PS417_03235 0.85 +1.0 739,698 + PS417_03235 0.85 +0.1 739,733 - PS417_03235 0.88 +0.2 739,809 + -0.3 739,868 - +0.1 739,868 - -0.2 740,240 + PS417_03240 0.27 -1.1 740,240 + PS417_03240 0.27 -1.7 740,323 - PS417_03240 0.36 -1.1 740,333 + PS417_03240 0.37 -0.8 740,334 - PS417_03240 0.37 -1.5 740,440 + PS417_03240 0.49 -0.2 740,440 + PS417_03240 0.49 -0.9 740,440 + PS417_03240 0.49 -1.7 740,441 - PS417_03240 0.49 -0.7 740,659 + PS417_03240 0.72 -0.6 740,659 + PS417_03240 0.72 -1.0 740,659 + PS417_03240 0.72 -2.4 740,659 + PS417_03240 0.72 -0.3 740,737 + PS417_03240 0.81 +0.6 740,913 + +0.4 740,981 + +0.5 740,981 + +0.3 741,122 + -1.1 741,165 - -1.0 741,439 - PS417_03245 0.30 -0.8 741,439 - PS417_03245 0.30 -1.1 741,448 + PS417_03245 0.30 -1.2 741,548 + PS417_03245 0.38 -1.0 741,549 - PS417_03245 0.38 -0.5 741,549 - PS417_03245 0.38 -1.2 741,549 - PS417_03245 0.38 -2.4 741,593 + PS417_03245 0.41 -0.5 741,593 + PS417_03245 0.41 -0.2 741,593 + PS417_03245 0.41 +0.1 741,594 - PS417_03245 0.41 -1.9 741,594 - PS417_03245 0.41 -1.9 741,594 - PS417_03245 0.41 -2.4 741,806 - PS417_03245 0.57 -1.1 741,806 - PS417_03245 0.57 -2.3
Or see this region's nucleotide sequence