Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4497

Experiment: D-Salicin (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Salicin (C)
5,374,613	-				-2.0
5,374,627	+				+2.2
5,374,627	+				+0.2
5,374,628	-				-0.2
5,374,628	-				+0.8
5,374,628	-				+0.5
5,374,628	-				-0.8
5,374,673	+				+0.0
5,374,674	-				+0.5
5,374,707	+				-0.4
5,374,708	-				+0.7
5,374,744	-				-0.3
5,374,778	+				-0.1
5,374,779	-				-1.4
5,374,787	+				-2.1
5,374,788	-				+0.1
5,374,788	-				-0.0
5,374,788	-				+0.2
5,374,802	-				+1.8
5,374,802	-				+2.5
5,374,802	-				+0.6
5,374,806	-				-1.1
5,374,807	+				-2.8
5,374,808	-				-1.0
5,374,808	-				-0.2
5,374,820	-				-2.2
5,374,821	+				+2.2
5,374,822	-				+1.4
5,374,822	-				+1.8
5,374,866	-				+2.1
5,374,866	-				+0.1
5,374,916	+				-0.8
5,374,919	+				-0.3
5,374,920	-				+1.2
5,374,923	-				-0.3
5,374,936	-				+0.1
5,374,979	+				-0.7
5,374,980	-				+0.8
5,375,004	+		Echvi_4496	0.14	+0.4
5,375,007	+				+0.2
5,375,008	-		Echvi_4496	0.14	+2.0
5,375,012	-		Echvi_4496	0.15	-0.7
5,375,012	-		Echvi_4496	0.15	-0.7
5,375,026	+		Echvi_4496	0.17	+0.1
5,375,054	+		Echvi_4496	0.21	+0.3
5,375,146	-		Echvi_4496	0.36	-0.6
5,375,146	-		Echvi_4496	0.36	-0.6
5,375,211	+		Echvi_4496	0.46	+0.2
5,375,279	+		Echvi_4496	0.57	+2.0
5,375,279	+		Echvi_4496	0.57	+0.2
5,375,279	+		Echvi_4496	0.57	+0.8
5,375,280	-		Echvi_4496	0.57	+0.3
5,375,280	-		Echvi_4496	0.57	-1.0
5,375,280	-		Echvi_4496	0.57	+0.5
5,375,280	-		Echvi_4496	0.57	+0.8
5,375,281	+		Echvi_4496	0.57	+0.2
5,375,281	+		Echvi_4496	0.57	-0.2
5,375,281	+		Echvi_4496	0.57	+0.5
5,375,281	+		Echvi_4496	0.57	-2.1
5,375,281	+		Echvi_4496	0.57	+0.7
5,375,281	+		Echvi_4496	0.57	+0.3
5,375,281	+		Echvi_4496	0.57	-1.2
5,375,334	+		Echvi_4496	0.66	+1.1
5,375,335	-		Echvi_4496	0.66	+0.5
5,375,361	-		Echvi_4496	0.70	-0.2
5,375,366	-		Echvi_4496	0.71	-0.4
5,375,398	-		Echvi_4496	0.76	-0.8
5,375,404	-		Echvi_4496	0.77	+1.8
5,375,404	-		Echvi_4496	0.77	+1.0
5,375,419	+		Echvi_4496	0.79	-1.3
5,375,420	-		Echvi_4496	0.79	-0.2
5,375,420	-		Echvi_4496	0.79	+0.8
5,375,455	+		Echvi_4496	0.85	-1.3
5,375,456	-		Echvi_4496	0.85	+1.2
5,375,456	-		Echvi_4496	0.85	-1.1
5,375,456	-		Echvi_4496	0.85	+3.0
5,375,459	-				+1.8
5,375,459	-		Echvi_4496	0.85	+0.8
5,375,459	-		Echvi_4496	0.85	-1.7
5,375,459	-		Echvi_4496	0.85	-3.9
5,375,463	+		Echvi_4496	0.86	-0.1
5,375,463	+		Echvi_4496	0.86	-0.7
5,375,464	-		Echvi_4496	0.86	+5.4
5,375,464	-		Echvi_4496	0.86	-0.9
5,375,464	-		Echvi_4496	0.86	+0.9
5,375,585	-				-0.7
5,375,586	+				+0.2
5,375,628	-		Echvi_4497	0.14	-0.5
5,375,628	-		Echvi_4497	0.14	-1.0
5,375,632	+		Echvi_4497	0.14	+2.4
5,375,633	-		Echvi_4497	0.14	-0.3
5,375,633	-		Echvi_4497	0.14	+0.6
5,375,633	-		Echvi_4497	0.14	+0.0
5,375,637	+		Echvi_4497	0.15	+1.0
5,375,637	+		Echvi_4497	0.15	+0.5
5,375,657	+		Echvi_4497	0.17	+0.4
5,375,662	+		Echvi_4497	0.17	-0.5
5,375,738	+		Echvi_4497	0.26	+0.2
5,375,738	+		Echvi_4497	0.26	+0.3
5,375,739	-		Echvi_4497	0.26	-0.1
5,375,739	-		Echvi_4497	0.26	+1.8
5,375,740	+		Echvi_4497	0.26	+1.3
5,375,741	-		Echvi_4497	0.26	-0.3
5,375,773	+		Echvi_4497	0.29	+2.4
5,375,774	-		Echvi_4497	0.29	-0.0
5,375,813	+		Echvi_4497	0.34	+0.0
5,375,864	-		Echvi_4497	0.39	+0.3
5,375,971	+		Echvi_4497	0.50	-0.2
5,375,971	+				+0.8
5,375,971	+		Echvi_4497	0.50	+0.3
5,376,066	-		Echvi_4497	0.60	+1.8
5,376,080	-		Echvi_4497	0.62	-0.6
5,376,080	-		Echvi_4497	0.62	+0.1
5,376,239	-		Echvi_4497	0.79	+1.5
5,376,450	+				+0.3
5,376,496	-				-0.2
5,376,527	+		Echvi_4498	0.27	-1.4
5,376,527	+		Echvi_4498	0.27	+0.0
5,376,527	+		Echvi_4498	0.27	-1.0
5,376,527	+		Echvi_4498	0.27	-0.5
5,376,527	+		Echvi_4498	0.27	-0.1
5,376,527	+		Echvi_4498	0.27	+0.1
5,376,527	+		Echvi_4498	0.27	-0.1
5,376,529	+		Echvi_4498	0.28	-1.0
5,376,529	+		Echvi_4498	0.28	+0.4
5,376,529	+		Echvi_4498	0.28	-1.1
5,376,529	+		Echvi_4498	0.28	+0.5
5,376,563	+		Echvi_4498	0.52	-0.3
5,376,567	+		Echvi_4498	0.55	-0.5
5,376,568	-		Echvi_4498	0.56	+1.0
5,376,693	-				-0.4
5,376,694	+				+0.0
5,376,695	-				+0.9
5,376,695	-				+0.8
5,376,708	-				-1.5
5,376,788	+		Echvi_4499	0.14	-0.1
5,376,833	-		Echvi_4499	0.19	-3.0
5,376,844	+		Echvi_4499	0.20	-0.5
5,376,845	-		Echvi_4499	0.21	-1.1
5,376,853	+		Echvi_4499	0.22	+0.6
5,376,921	+		Echvi_4499	0.30	+1.5
5,376,922	-		Echvi_4499	0.30	-1.5
5,376,923	+		Echvi_4499	0.30	-0.9
5,376,923	+		Echvi_4499	0.30	-0.9
5,376,923	+		Echvi_4499	0.30	-0.2
5,376,923	+		Echvi_4499	0.30	-1.0
5,376,923	+		Echvi_4499	0.30	+0.2
5,376,923	+		Echvi_4499	0.30	-0.9
5,376,924	-		Echvi_4499	0.30	-0.7
5,376,953	-		Echvi_4499	0.33	-0.2
5,376,956	+		Echvi_4499	0.34	-1.5
5,376,956	+		Echvi_4499	0.34	-1.1
5,376,970	+		Echvi_4499	0.35	-0.2
5,377,072	+		Echvi_4499	0.48	+1.2
5,377,073	-		Echvi_4499	0.48	-1.0
5,377,073	-		Echvi_4499	0.48	-0.4
5,377,074	+		Echvi_4499	0.48	+0.7
5,377,074	+		Echvi_4499	0.48	-0.8
5,377,075	-		Echvi_4499	0.48	-0.5
5,377,075	-		Echvi_4499	0.48	-0.1
5,377,075	-		Echvi_4499	0.48	-0.2
5,377,075	-		Echvi_4499	0.48	-0.4
5,377,092	+		Echvi_4499	0.50	-0.6
5,377,092	+		Echvi_4499	0.50	+0.3
5,377,094	+		Echvi_4499	0.50	+1.8
5,377,095	-		Echvi_4499	0.50	+0.9
5,377,251	-		Echvi_4499	0.69	-1.7
5,377,265	-		Echvi_4499	0.71	-0.2
5,377,367	+		Echvi_4499	0.83	+0.6
5,377,395	-		Echvi_4499	0.86	-1.7
5,377,414	+		Echvi_4499	0.88	+1.1
5,377,415	-		Echvi_4499	0.88	-0.6
5,377,426	+		Echvi_4499	0.90	+0.5
5,377,427	-		Echvi_4499	0.90	+0.3
5,377,429	+				-1.5
5,377,429	+				+0.9
5,377,430	-				-2.2
5,377,430	-				+0.8
5,377,430	-				+0.3
5,377,430	-				+0.1
5,377,430	-				+0.2