Experiment: Chloride 400 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4160 and PfGW456L13_4161 are separated by 60 nucleotides PfGW456L13_4161 and PfGW456L13_4162 are separated by 4 nucleotides PfGW456L13_4162 and PfGW456L13_4163 are separated by 20 nucleotides PfGW456L13_4163 and PfGW456L13_4164 overlap by 4 nucleotides
PfGW456L13_4160 - FIG00958237: hypothetical protein, at 4,676,445 to 4,676,723
_4160
PfGW456L13_4161 - 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase (EC 3.1.3.77), at 4,676,784 to 4,677,467
_4161
PfGW456L13_4162 - 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54), at 4,677,472 to 4,678,017
_4162
PfGW456L13_4163 - Methylthioribulose-1-phosphate dehydratase (EC 4.2.1.109), at 4,678,038 to 4,678,658
_4163
PfGW456L13_4164 - Nucleoside:H+ symporter:Major facilitator superfamily, at 4,678,655 to 4,679,806
_4164
Position (kb)
4677
4678
4679 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4676.577 kb on + strand, within PfGW456L13_4160 at 4676.578 kb on - strand, within PfGW456L13_4160 at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.709 kb on + strand at 4676.710 kb on - strand at 4677.657 kb on - strand, within PfGW456L13_4162 at 4677.706 kb on + strand, within PfGW456L13_4162 at 4677.707 kb on - strand, within PfGW456L13_4162 at 4677.707 kb on - strand, within PfGW456L13_4162 at 4677.916 kb on + strand, within PfGW456L13_4162 at 4677.998 kb on + strand at 4677.999 kb on - strand at 4677.999 kb on - strand at 4678.047 kb on - strand at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.138 kb on + strand, within PfGW456L13_4163 at 4678.139 kb on + strand, within PfGW456L13_4163 at 4678.139 kb on - strand, within PfGW456L13_4163 at 4678.139 kb on - strand, within PfGW456L13_4163 at 4678.139 kb on - strand, within PfGW456L13_4163 at 4678.139 kb on - strand, within PfGW456L13_4163 at 4678.139 kb on - strand, within PfGW456L13_4163 at 4678.303 kb on + strand, within PfGW456L13_4163 at 4678.303 kb on + strand, within PfGW456L13_4163 at 4678.303 kb on + strand, within PfGW456L13_4163 at 4678.304 kb on - strand, within PfGW456L13_4163 at 4678.320 kb on - strand, within PfGW456L13_4163 at 4678.405 kb on + strand, within PfGW456L13_4163 at 4678.405 kb on + strand, within PfGW456L13_4163 at 4678.405 kb on + strand, within PfGW456L13_4163 at 4678.406 kb on - strand, within PfGW456L13_4163 at 4678.406 kb on - strand, within PfGW456L13_4163 at 4678.564 kb on + strand, within PfGW456L13_4163 at 4678.564 kb on + strand, within PfGW456L13_4163 at 4678.564 kb on + strand, within PfGW456L13_4163 at 4678.565 kb on - strand, within PfGW456L13_4163 at 4678.565 kb on - strand, within PfGW456L13_4163 at 4678.568 kb on + strand, within PfGW456L13_4163 at 4678.568 kb on + strand, within PfGW456L13_4163 at 4678.568 kb on + strand, within PfGW456L13_4163 at 4678.568 kb on + strand, within PfGW456L13_4163 at 4678.569 kb on - strand, within PfGW456L13_4163 at 4678.569 kb on - strand, within PfGW456L13_4163 at 4678.569 kb on - strand, within PfGW456L13_4163 at 4678.569 kb on - strand, within PfGW456L13_4163 at 4678.601 kb on - strand at 4678.675 kb on + strand at 4678.675 kb on + strand at 4678.675 kb on + strand at 4678.675 kb on + strand at 4678.675 kb on + strand at 4678.675 kb on + strand at 4678.675 kb on + strand at 4678.675 kb on + strand at 4678.676 kb on - strand at 4678.676 kb on - strand at 4678.676 kb on - strand at 4678.676 kb on - strand at 4678.676 kb on - strand at 4678.676 kb on - strand at 4678.676 kb on - strand at 4678.676 kb on - strand at 4678.724 kb on - strand at 4678.726 kb on + strand at 4678.726 kb on + strand at 4678.726 kb on + strand at 4678.726 kb on + strand at 4678.726 kb on + strand at 4678.726 kb on + strand at 4678.726 kb on + strand at 4678.727 kb on - strand at 4678.727 kb on - strand at 4678.727 kb on - strand at 4678.727 kb on - strand at 4678.727 kb on - strand at 4678.727 kb on - strand at 4678.727 kb on - strand at 4678.727 kb on - strand at 4678.727 kb on - strand at 4678.770 kb on + strand at 4678.770 kb on + strand at 4678.770 kb on + strand at 4678.770 kb on + strand at 4678.771 kb on - strand, within PfGW456L13_4164 at 4678.813 kb on - strand, within PfGW456L13_4164 at 4678.813 kb on - strand, within PfGW456L13_4164 at 4678.853 kb on - strand, within PfGW456L13_4164 at 4678.853 kb on - strand, within PfGW456L13_4164
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 400 mM remove 4,676,577 + PfGW456L13_4160 0.47 -0.1 4,676,578 - PfGW456L13_4160 0.48 -0.5 4,676,709 + +0.6 4,676,709 + -0.6 4,676,709 + -0.8 4,676,709 + -0.6 4,676,709 + -0.2 4,676,709 + +0.7 4,676,710 - -0.2 4,677,657 - PfGW456L13_4162 0.34 -1.1 4,677,706 + PfGW456L13_4162 0.43 -0.8 4,677,707 - PfGW456L13_4162 0.43 +0.6 4,677,707 - PfGW456L13_4162 0.43 -1.1 4,677,916 + PfGW456L13_4162 0.81 -1.4 4,677,998 + +0.2 4,677,999 - -2.4 4,677,999 - +0.1 4,678,047 - -0.5 4,678,138 + PfGW456L13_4163 0.16 -1.0 4,678,138 + PfGW456L13_4163 0.16 -1.0 4,678,138 + PfGW456L13_4163 0.16 +0.2 4,678,138 + PfGW456L13_4163 0.16 +0.0 4,678,138 + PfGW456L13_4163 0.16 +0.7 4,678,138 + PfGW456L13_4163 0.16 -1.0 4,678,138 + PfGW456L13_4163 0.16 +3.4 4,678,138 + PfGW456L13_4163 0.16 -0.5 4,678,138 + PfGW456L13_4163 0.16 -0.3 4,678,139 + PfGW456L13_4163 0.16 +1.8 4,678,139 - PfGW456L13_4163 0.16 +0.5 4,678,139 - PfGW456L13_4163 0.16 +0.2 4,678,139 - PfGW456L13_4163 0.16 -0.7 4,678,139 - PfGW456L13_4163 0.16 -0.3 4,678,139 - PfGW456L13_4163 0.16 -1.2 4,678,303 + PfGW456L13_4163 0.43 -0.1 4,678,303 + PfGW456L13_4163 0.43 +1.1 4,678,303 + PfGW456L13_4163 0.43 -0.4 4,678,304 - PfGW456L13_4163 0.43 -0.2 4,678,320 - PfGW456L13_4163 0.45 +1.0 4,678,405 + PfGW456L13_4163 0.59 -1.3 4,678,405 + PfGW456L13_4163 0.59 -0.1 4,678,405 + PfGW456L13_4163 0.59 +0.3 4,678,406 - PfGW456L13_4163 0.59 -0.6 4,678,406 - PfGW456L13_4163 0.59 -0.5 4,678,564 + PfGW456L13_4163 0.85 +0.7 4,678,564 + PfGW456L13_4163 0.85 +0.8 4,678,564 + PfGW456L13_4163 0.85 +0.2 4,678,565 - PfGW456L13_4163 0.85 +0.1 4,678,565 - PfGW456L13_4163 0.85 +0.3 4,678,568 + PfGW456L13_4163 0.85 -0.5 4,678,568 + PfGW456L13_4163 0.85 +0.4 4,678,568 + PfGW456L13_4163 0.85 -0.0 4,678,568 + PfGW456L13_4163 0.85 +1.0 4,678,569 - PfGW456L13_4163 0.86 -1.5 4,678,569 - PfGW456L13_4163 0.86 +0.0 4,678,569 - PfGW456L13_4163 0.86 -0.2 4,678,569 - PfGW456L13_4163 0.86 -0.1 4,678,601 - +0.3 4,678,675 + +0.1 4,678,675 + -0.6 4,678,675 + -0.3 4,678,675 + +0.8 4,678,675 + +0.1 4,678,675 + -0.0 4,678,675 + -0.1 4,678,675 + +0.1 4,678,676 - -0.3 4,678,676 - +0.4 4,678,676 - -0.4 4,678,676 - +0.2 4,678,676 - +0.5 4,678,676 - +0.7 4,678,676 - -0.3 4,678,676 - -0.4 4,678,724 - +0.7 4,678,726 + +0.6 4,678,726 + +1.2 4,678,726 + -0.2 4,678,726 + +0.1 4,678,726 + -0.1 4,678,726 + +0.7 4,678,726 + -0.2 4,678,727 - -0.1 4,678,727 - +0.6 4,678,727 - -0.2 4,678,727 - +1.5 4,678,727 - +0.2 4,678,727 - -0.2 4,678,727 - +0.1 4,678,727 - +0.9 4,678,727 - -0.7 4,678,770 + +0.4 4,678,770 + -0.2 4,678,770 + -0.2 4,678,770 + -0.4 4,678,771 - PfGW456L13_4164 0.10 +0.5 4,678,813 - PfGW456L13_4164 0.14 +1.2 4,678,813 - PfGW456L13_4164 0.14 +0.7 4,678,853 - PfGW456L13_4164 0.17 -0.4 4,678,853 - PfGW456L13_4164 0.17 -0.5
Or see this region's nucleotide sequence