Experiment: Chloride 400 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2814 and PfGW456L13_2815 are separated by 179 nucleotides PfGW456L13_2815 and PfGW456L13_2816 overlap by 1 nucleotides PfGW456L13_2816 and PfGW456L13_2817 overlap by 4 nucleotides PfGW456L13_2817 and PfGW456L13_2818 overlap by 4 nucleotides
PfGW456L13_2814 - Alkanesulfonates-binding protein, at 3,119,763 to 3,121,169
_2814
PfGW456L13_2815 - Alkanesulfonates transport system permease protein, at 3,121,349 to 3,122,089
_2815
PfGW456L13_2816 - Various polyols ABC transporter, ATP-binding component, at 3,122,089 to 3,122,937
_2816
PfGW456L13_2817 - HEAT repeat-containing protein, at 3,122,934 to 3,123,896
_2817
PfGW456L13_2818 - FIG028220: hypothetical protein co-occurring with HEAT repeat protein, at 3,123,893 to 3,124,171
_2818
Position (kb)
3122
3123 Strain fitness (log2 ratio)
-2
-1
0
1 at 3121.142 kb on + strand at 3121.302 kb on + strand at 3121.302 kb on + strand at 3121.302 kb on + strand at 3121.303 kb on - strand at 3121.303 kb on - strand at 3121.303 kb on - strand at 3121.303 kb on - strand at 3121.303 kb on - strand at 3121.320 kb on - strand at 3121.362 kb on + strand at 3121.415 kb on + strand at 3121.415 kb on + strand at 3121.415 kb on + strand at 3121.416 kb on - strand at 3121.416 kb on - strand at 3121.940 kb on + strand, within PfGW456L13_2815 at 3121.940 kb on + strand, within PfGW456L13_2815 at 3121.940 kb on + strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.941 kb on - strand, within PfGW456L13_2815 at 3121.955 kb on + strand, within PfGW456L13_2815 at 3121.955 kb on + strand, within PfGW456L13_2815 at 3121.956 kb on - strand, within PfGW456L13_2815 at 3121.970 kb on + strand, within PfGW456L13_2815 at 3121.971 kb on - strand, within PfGW456L13_2815 at 3122.119 kb on - strand at 3122.646 kb on + strand, within PfGW456L13_2816 at 3122.953 kb on + strand at 3122.953 kb on + strand at 3123.014 kb on - strand at 3123.014 kb on - strand at 3123.227 kb on + strand, within PfGW456L13_2817 at 3123.227 kb on + strand, within PfGW456L13_2817 at 3123.296 kb on - strand, within PfGW456L13_2817 at 3123.296 kb on - strand, within PfGW456L13_2817 at 3123.815 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 400 mM remove 3,121,142 + -0.8 3,121,302 + +0.9 3,121,302 + -0.6 3,121,302 + +0.2 3,121,303 - -0.2 3,121,303 - -0.3 3,121,303 - -0.7 3,121,303 - -1.9 3,121,303 - +0.4 3,121,320 - +0.3 3,121,362 + -0.4 3,121,415 + -0.1 3,121,415 + +1.0 3,121,415 + -0.1 3,121,416 - -0.2 3,121,416 - -0.5 3,121,940 + PfGW456L13_2815 0.80 +0.1 3,121,940 + PfGW456L13_2815 0.80 +0.6 3,121,940 + PfGW456L13_2815 0.80 +0.1 3,121,941 - PfGW456L13_2815 0.80 -0.4 3,121,941 - PfGW456L13_2815 0.80 -0.8 3,121,941 - PfGW456L13_2815 0.80 +0.6 3,121,941 - PfGW456L13_2815 0.80 +1.6 3,121,941 - PfGW456L13_2815 0.80 -0.5 3,121,941 - PfGW456L13_2815 0.80 -0.3 3,121,955 + PfGW456L13_2815 0.82 -0.7 3,121,955 + PfGW456L13_2815 0.82 +0.0 3,121,956 - PfGW456L13_2815 0.82 -0.6 3,121,970 + PfGW456L13_2815 0.84 -0.1 3,121,971 - PfGW456L13_2815 0.84 +0.1 3,122,119 - +0.8 3,122,646 + PfGW456L13_2816 0.66 -0.6 3,122,953 + +0.1 3,122,953 + -0.3 3,123,014 - -0.8 3,123,014 - +0.9 3,123,227 + PfGW456L13_2817 0.30 -0.6 3,123,227 + PfGW456L13_2817 0.30 -0.4 3,123,296 - PfGW456L13_2817 0.38 +0.1 3,123,296 - PfGW456L13_2817 0.38 +0.6 3,123,815 - +0.2
Or see this region's nucleotide sequence