Experiment: Chloride 400 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_2602 and PfGW456L13_2603 are separated by 237 nucleotides PfGW456L13_2603 and PfGW456L13_2604 are separated by 11 nucleotides
PfGW456L13_2602 - putative exported protein, at 2,891,638 to 2,895,276
_2602
PfGW456L13_2603 - Transcriptional regulator, MarR family, at 2,895,514 to 2,895,987
_2603
PfGW456L13_2604 - Outer membrane component of tripartite multidrug resistance system, at 2,895,999 to 2,897,453
_2604
Position (kb)
2895
2896 Strain fitness (log2 ratio)
-2
-1
0
1 at 2894.803 kb on + strand, within PfGW456L13_2602 at 2894.932 kb on + strand at 2894.933 kb on - strand at 2894.933 kb on - strand at 2894.933 kb on - strand at 2895.018 kb on + strand at 2895.019 kb on - strand at 2895.019 kb on - strand at 2895.019 kb on - strand at 2895.124 kb on - strand at 2895.124 kb on - strand at 2895.124 kb on - strand at 2895.124 kb on - strand at 2895.178 kb on - strand at 2895.178 kb on - strand at 2895.215 kb on - strand at 2895.259 kb on + strand at 2895.259 kb on + strand at 2895.260 kb on - strand at 2895.260 kb on - strand at 2895.274 kb on + strand at 2895.275 kb on - strand at 2895.275 kb on - strand at 2895.417 kb on + strand at 2895.433 kb on + strand at 2895.434 kb on - strand at 2895.434 kb on - strand at 2895.437 kb on + strand at 2895.437 kb on + strand at 2895.437 kb on + strand at 2895.437 kb on + strand at 2895.438 kb on - strand at 2895.460 kb on - strand at 2895.467 kb on - strand at 2895.492 kb on + strand at 2895.500 kb on + strand at 2895.500 kb on + strand at 2895.501 kb on - strand at 2895.692 kb on + strand, within PfGW456L13_2603 at 2895.693 kb on - strand, within PfGW456L13_2603 at 2895.974 kb on + strand at 2895.975 kb on - strand at 2895.993 kb on - strand at 2896.056 kb on + strand at 2896.380 kb on + strand, within PfGW456L13_2604 at 2896.381 kb on - strand, within PfGW456L13_2604 at 2896.416 kb on + strand, within PfGW456L13_2604 at 2896.539 kb on + strand, within PfGW456L13_2604 at 2896.539 kb on + strand, within PfGW456L13_2604 at 2896.539 kb on + strand at 2896.540 kb on - strand, within PfGW456L13_2604 at 2896.540 kb on - strand, within PfGW456L13_2604 at 2896.540 kb on - strand, within PfGW456L13_2604 at 2896.540 kb on - strand, within PfGW456L13_2604 at 2896.657 kb on - strand, within PfGW456L13_2604 at 2896.829 kb on - strand, within PfGW456L13_2604 at 2896.938 kb on + strand, within PfGW456L13_2604 at 2896.938 kb on + strand, within PfGW456L13_2604 at 2896.939 kb on - strand, within PfGW456L13_2604
Per-strain Table
Position Strand Gene LocusTag Fraction Chloride 400 mM remove 2,894,803 + PfGW456L13_2602 0.87 -0.5 2,894,932 + -0.7 2,894,933 - -2.7 2,894,933 - -1.0 2,894,933 - -0.7 2,895,018 + -0.6 2,895,019 - +0.8 2,895,019 - -0.8 2,895,019 - -0.4 2,895,124 - -2.2 2,895,124 - -0.3 2,895,124 - -1.2 2,895,124 - +0.1 2,895,178 - -1.0 2,895,178 - -1.1 2,895,215 - -1.4 2,895,259 + -1.7 2,895,259 + -0.2 2,895,260 - -0.2 2,895,260 - -1.7 2,895,274 + -0.9 2,895,275 - +0.3 2,895,275 - +0.8 2,895,417 + +1.2 2,895,433 + +1.0 2,895,434 - +0.5 2,895,434 - -0.1 2,895,437 + +0.5 2,895,437 + +0.4 2,895,437 + +0.3 2,895,437 + -0.2 2,895,438 - -0.0 2,895,460 - +0.1 2,895,467 - +0.7 2,895,492 + +0.5 2,895,500 + -0.7 2,895,500 + -0.6 2,895,501 - -0.1 2,895,692 + PfGW456L13_2603 0.38 +0.5 2,895,693 - PfGW456L13_2603 0.38 +0.3 2,895,974 + -1.0 2,895,975 - -0.5 2,895,993 - -2.3 2,896,056 + +0.9 2,896,380 + PfGW456L13_2604 0.26 +0.8 2,896,381 - PfGW456L13_2604 0.26 -0.1 2,896,416 + PfGW456L13_2604 0.29 -1.2 2,896,539 + PfGW456L13_2604 0.37 +0.4 2,896,539 + PfGW456L13_2604 0.37 -0.3 2,896,539 + -0.2 2,896,540 - PfGW456L13_2604 0.37 +1.6 2,896,540 - PfGW456L13_2604 0.37 -0.5 2,896,540 - PfGW456L13_2604 0.37 +0.8 2,896,540 - PfGW456L13_2604 0.37 +0.5 2,896,657 - PfGW456L13_2604 0.45 -1.0 2,896,829 - PfGW456L13_2604 0.57 -0.4 2,896,938 + PfGW456L13_2604 0.65 +0.5 2,896,938 + PfGW456L13_2604 0.65 -0.0 2,896,939 - PfGW456L13_2604 0.65 -0.7
Or see this region's nucleotide sequence