Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4400

Experiment: D-Glucosamine Hydrochloride (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucosamine Hydrochloride (C)
5,259,018	+		Echvi_4399	0.31	-0.9
5,259,018	+		Echvi_4399	0.31	-3.3
5,259,021	-		Echvi_4399	0.31	-1.1
5,259,023	+		Echvi_4399	0.31	-2.2
5,259,038	+		Echvi_4399	0.32	-1.0
5,259,072	+		Echvi_4399	0.35	-2.9
5,259,091	-		Echvi_4399	0.36	-2.1
5,259,310	+		Echvi_4399	0.53	-2.3
5,259,325	+		Echvi_4399	0.54	-1.3
5,259,329	-		Echvi_4399	0.55	-3.0
5,259,329	-		Echvi_4399	0.55	-2.3
5,259,330	+		Echvi_4399	0.55	-2.4
5,259,331	-		Echvi_4399	0.55	-0.3
5,259,336	+		Echvi_4399	0.55	-0.3
5,259,349	+		Echvi_4399	0.56	-3.7
5,259,350	-		Echvi_4399	0.56	+0.7
5,259,357	-		Echvi_4399	0.57	+0.7
5,259,361	+				+1.7
5,259,362	-		Echvi_4399	0.57	-2.8
5,259,362	-		Echvi_4399	0.57	-2.8
5,259,402	+		Echvi_4399	0.60	-2.8
5,259,529	-		Echvi_4399	0.70	-1.8
5,259,594	+		Echvi_4399	0.75	-4.3
5,259,597	+		Echvi_4399	0.75	-3.2
5,259,646	+		Echvi_4399	0.79	-2.8
5,259,793	+				-1.6
5,259,797	+				-2.8
5,259,877	+				-3.0
5,259,888	+				-3.0
5,259,895	+				-2.1
5,259,903	+				-2.6
5,259,903	+				-1.0
5,259,938	-				+0.8
5,259,952	-				-2.1
5,259,980	+				-0.8
5,259,981	-				-1.5
5,259,985	+				-1.3
5,259,985	+				-0.6
5,259,990	+				+0.3
5,259,990	+				-0.5
5,259,990	+				-1.4
5,259,991	-				+0.6
5,260,011	+				-1.3
5,260,013	+				-0.9
5,260,044	-				-0.8
5,260,077	-		Echvi_4400	0.11	-0.2
5,260,080	+		Echvi_4400	0.11	-1.4
5,260,105	-		Echvi_4400	0.13	+0.0
5,260,187	+		Echvi_4400	0.19	-3.4
5,260,187	+		Echvi_4400	0.19	-2.9
5,260,187	+		Echvi_4400	0.19	-1.0
5,260,187	+		Echvi_4400	0.19	-1.7
5,260,188	-		Echvi_4400	0.19	-0.5
5,260,189	+		Echvi_4400	0.19	-2.2
5,260,189	+		Echvi_4400	0.19	-1.1
5,260,189	+		Echvi_4400	0.19	+0.3
5,260,189	+		Echvi_4400	0.19	-1.7
5,260,189	+		Echvi_4400	0.19	-1.6
5,260,190	-		Echvi_4400	0.19	+1.2
5,260,190	-		Echvi_4400	0.19	-0.4
5,260,191	+		Echvi_4400	0.19	-1.2
5,260,191	+		Echvi_4400	0.19	-0.7
5,260,191	+		Echvi_4400	0.19	-0.9
5,260,191	+		Echvi_4400	0.19	-0.6
5,260,191	+		Echvi_4400	0.19	-1.4
5,260,191	+		Echvi_4400	0.19	-1.2
5,260,191	+		Echvi_4400	0.19	-1.9
5,260,192	-		Echvi_4400	0.19	+0.2
5,260,193	+		Echvi_4400	0.19	-1.6
5,260,193	+		Echvi_4400	0.19	+0.1
5,260,193	+		Echvi_4400	0.19	-0.6
5,260,193	+		Echvi_4400	0.19	-1.6
5,260,193	+		Echvi_4400	0.19	-0.9
5,260,193	+		Echvi_4400	0.19	-2.3
5,260,197	+		Echvi_4400	0.20	-0.3
5,260,197	+		Echvi_4400	0.20	-3.2
5,260,197	+		Echvi_4400	0.20	+0.3
5,260,197	+		Echvi_4400	0.20	-0.8
5,260,197	+		Echvi_4400	0.20	-0.8
5,260,197	+		Echvi_4400	0.20	-2.1
5,260,208	+		Echvi_4400	0.21	-0.3
5,260,208	+		Echvi_4400	0.21	-1.1
5,260,217	+		Echvi_4400	0.21	-0.6
5,260,263	-		Echvi_4400	0.25	-1.3
5,260,310	+		Echvi_4400	0.28	-2.8
5,260,311	-		Echvi_4400	0.28	+1.1
5,260,332	-		Echvi_4400	0.30	-0.3
5,260,332	-		Echvi_4400	0.30	-0.9
5,260,332	-		Echvi_4400	0.30	+0.1
5,260,335	-		Echvi_4400	0.30	-0.2
5,260,342	-		Echvi_4400	0.31	+0.1
5,260,362	-		Echvi_4400	0.32	-3.1
5,260,394	+		Echvi_4400	0.35	-0.9
5,260,406	-		Echvi_4400	0.36	-0.4
5,260,406	-		Echvi_4400	0.36	-0.2
5,260,424	+		Echvi_4400	0.37	-1.3
5,260,424	+		Echvi_4400	0.37	-2.4
5,260,425	-		Echvi_4400	0.37	-0.9
5,260,451	+		Echvi_4400	0.39	-0.7
5,260,472	+		Echvi_4400	0.41	+0.1
5,260,476	-		Echvi_4400	0.41	+0.1
5,260,508	+		Echvi_4400	0.43	-0.4
5,260,509	-		Echvi_4400	0.43	-1.8
5,260,509	-		Echvi_4400	0.43	-0.8
5,260,512	+		Echvi_4400	0.44	-0.2
5,260,578	+		Echvi_4400	0.49	-1.0
5,260,579	-		Echvi_4400	0.49	-0.4
5,260,586	+		Echvi_4400	0.49	-1.6
5,260,586	+		Echvi_4400	0.49	-1.4
5,260,587	-		Echvi_4400	0.49	-0.7
5,260,607	+		Echvi_4400	0.51	-1.2
5,260,607	+		Echvi_4400	0.51	-1.2
5,260,608	-		Echvi_4400	0.51	-0.9
5,260,608	-		Echvi_4400	0.51	+0.8
5,260,621	+		Echvi_4400	0.52	-0.6
5,260,621	+		Echvi_4400	0.52	-1.8
5,260,621	+		Echvi_4400	0.52	-1.9
5,260,622	-		Echvi_4400	0.52	-1.1
5,260,622	-		Echvi_4400	0.52	+0.7
5,260,622	-		Echvi_4400	0.52	+0.1
5,260,622	-		Echvi_4400	0.52	-0.2
5,260,625	+		Echvi_4400	0.52	-1.5
5,260,626	-		Echvi_4400	0.52	+0.7
5,260,648	+		Echvi_4400	0.54	-3.4
5,260,659	+		Echvi_4400	0.55	-0.1
5,260,659	+		Echvi_4400	0.55	-0.4
5,260,727	+		Echvi_4400	0.60	-1.3
5,260,728	-		Echvi_4400	0.60	+0.3
5,260,740	-		Echvi_4400	0.61	-0.6
5,260,765	+		Echvi_4400	0.63	-0.5
5,260,778	+		Echvi_4400	0.64	-0.6
5,260,807	-		Echvi_4400	0.66	-0.9
5,260,840	+		Echvi_4400	0.68	-0.3
5,260,847	+		Echvi_4400	0.69	-1.3
5,260,847	+		Echvi_4400	0.69	-1.1
5,260,847	+		Echvi_4400	0.69	-2.4
5,260,848	-		Echvi_4400	0.69	-1.6
5,260,848	-		Echvi_4400	0.69	-0.6
5,260,855	+		Echvi_4400	0.70	+0.5
5,260,878	+		Echvi_4400	0.71	-0.2
5,260,934	+		Echvi_4400	0.76	-0.8
5,260,934	+		Echvi_4400	0.76	-1.0
5,260,934	+		Echvi_4400	0.76	-1.2
5,260,934	+		Echvi_4400	0.76	-1.5
5,260,935	-		Echvi_4400	0.76	+0.3
5,260,935	-		Echvi_4400	0.76	+0.6
5,260,935	-		Echvi_4400	0.76	+0.3
5,260,962	+		Echvi_4400	0.78	-1.6
5,260,962	+		Echvi_4400	0.78	-1.1
5,260,968	-		Echvi_4400	0.78	-0.5
5,260,974	-		Echvi_4400	0.79	-0.1
5,261,138	+				-2.7
5,261,139	-				+0.1
5,261,139	-				+0.4
5,261,143	+				-0.8
5,261,153	+				-0.1
5,261,154	-				-0.9
5,261,154	-				-0.0
5,261,161	+				-1.3
5,261,161	+				-2.6
5,261,161	+				-1.2
5,261,161	+				-3.0
5,261,161	+				-2.2
5,261,161	+				+0.0
5,261,162	-				-0.2
5,261,162	-				+0.1
5,261,162	-				+0.6
5,261,162	-				+0.1
5,261,198	-				+1.7
5,261,198	-				-0.2
5,261,348	-				+0.3
5,261,398	+				-2.0
5,261,398	+				-2.5
5,261,398	+				-1.5
5,261,408	+				-2.3
5,261,409	-				-1.4
5,261,414	+				-2.8
5,261,417	+				-1.9
5,261,417	+				-4.3
5,261,417	+				-0.9
5,261,420	+				-2.3
5,261,435	+				-3.2
5,261,436	-				-1.6
5,261,463	-				-5.6
5,261,465	+				-1.9
5,261,465	+				-0.9
5,261,466	-				-3.2
5,261,466	-				-2.7
5,261,479	+		Echvi_4401	0.10	-2.9
5,261,507	-		Echvi_4401	0.13	-3.3
5,261,509	+		Echvi_4401	0.13	-3.2
5,261,510	-		Echvi_4401	0.13	-2.3
5,261,510	-		Echvi_4401	0.13	-3.0
5,261,536	+		Echvi_4401	0.15	-3.8
5,261,536	+		Echvi_4401	0.15	-1.1
5,261,536	+		Echvi_4401	0.15	+0.7
5,261,537	-		Echvi_4401	0.15	-5.0
5,261,557	+		Echvi_4401	0.17	-1.6
5,261,639	+		Echvi_4401	0.24	-2.8
5,261,672	-		Echvi_4401	0.27	+1.0
5,261,700	-		Echvi_4401	0.30	+1.7
5,261,743	+		Echvi_4401	0.34	-3.7
5,261,802	-		Echvi_4401	0.39	-3.3
5,261,881	+		Echvi_4401	0.46	-0.9
5,261,950	+		Echvi_4401	0.52	-4.7
5,261,968	+		Echvi_4401	0.54	-2.2
5,261,972	+		Echvi_4401	0.54	-2.4
5,261,973	-		Echvi_4401	0.54	-2.3
5,261,973	-		Echvi_4401	0.54	-2.4
5,262,012	-		Echvi_4401	0.58	-3.8
5,262,012	-		Echvi_4401	0.58	-2.7
5,262,039	+		Echvi_4401	0.60	-2.5
5,262,050	-		Echvi_4401	0.61	-2.8
5,262,076	-		Echvi_4401	0.64	-4.3
5,262,084	+		Echvi_4401	0.64	-0.3
5,262,084	+		Echvi_4401	0.64	-1.7
5,262,087	+		Echvi_4401	0.65	-4.2
5,262,088	-		Echvi_4401	0.65	-1.1
5,262,088	-		Echvi_4401	0.65	-1.7
5,262,088	-		Echvi_4401	0.65	-3.3
5,262,097	-		Echvi_4401	0.66	-4.4
5,262,140	+		Echvi_4401	0.69	-2.8
5,262,141	-		Echvi_4401	0.69	-3.1
5,262,163	+		Echvi_4401	0.71	-3.5
5,262,163	+		Echvi_4401	0.71	-1.6
5,262,163	+		Echvi_4401	0.71	-3.8
5,262,163	+		Echvi_4401	0.71	-1.1
5,262,185	+		Echvi_4401	0.73	-3.6
5,262,185	+		Echvi_4401	0.73	-2.9
5,262,185	+		Echvi_4401	0.73	-0.9
5,262,185	+		Echvi_4401	0.73	-1.8
5,262,186	-		Echvi_4401	0.73	-5.4
5,262,186	-		Echvi_4401	0.73	-2.8
5,262,186	-		Echvi_4401	0.73	-2.0