Experiment: D-Glucosamine Hydrochloride (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0737 and Echvi_0738 are separated by 221 nucleotides Echvi_0738 and Echvi_0739 are separated by 285 nucleotides
Echvi_0737: Echvi_0737 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 826,247 to 826,879
_0737
Echvi_0738: Echvi_0738 - Acyl-CoA dehydrogenases, at 827,101 to 828,459
_0738
Echvi_0739: Echvi_0739 - hypothetical protein, at 828,745 to 829,599
_0739
Position (kb) 827
828
829 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 826.184 kb on + strand at 826.184 kb on + strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.233 kb on + strand at 826.272 kb on - strand at 826.301 kb on + strand at 826.366 kb on + strand, within Echvi_0737 at 826.366 kb on + strand, within Echvi_0737 at 826.391 kb on - strand, within Echvi_0737 at 826.474 kb on + strand, within Echvi_0737 at 826.475 kb on - strand, within Echvi_0737 at 826.495 kb on + strand, within Echvi_0737 at 826.540 kb on - strand, within Echvi_0737 at 826.631 kb on - strand, within Echvi_0737 at 826.735 kb on + strand, within Echvi_0737 at 826.745 kb on + strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.777 kb on - strand, within Echvi_0737 at 826.796 kb on - strand, within Echvi_0737 at 826.858 kb on + strand at 826.951 kb on - strand at 826.979 kb on - strand at 826.992 kb on + strand at 827.031 kb on - strand at 827.038 kb on - strand at 827.038 kb on - strand at 827.040 kb on + strand at 827.041 kb on - strand at 827.041 kb on - strand at 827.043 kb on + strand at 827.050 kb on - strand at 827.063 kb on + strand at 827.063 kb on + strand at 827.064 kb on - strand at 827.095 kb on + strand at 827.095 kb on + strand at 827.111 kb on + strand at 827.189 kb on + strand at 827.288 kb on + strand, within Echvi_0738 at 827.289 kb on - strand, within Echvi_0738 at 827.289 kb on - strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.560 kb on - strand, within Echvi_0738 at 827.608 kb on + strand, within Echvi_0738 at 827.702 kb on + strand, within Echvi_0738 at 827.733 kb on + strand, within Echvi_0738 at 827.740 kb on - strand, within Echvi_0738 at 827.859 kb on + strand, within Echvi_0738 at 827.860 kb on - strand, within Echvi_0738 at 828.076 kb on + strand, within Echvi_0738 at 828.077 kb on - strand, within Echvi_0738 at 828.261 kb on + strand, within Echvi_0738 at 828.262 kb on - strand, within Echvi_0738 at 828.274 kb on - strand, within Echvi_0738 at 828.343 kb on + strand at 828.383 kb on - strand at 828.383 kb on - strand at 828.383 kb on - strand at 828.388 kb on + strand at 828.389 kb on - strand at 828.389 kb on - strand at 828.492 kb on - strand at 828.494 kb on + strand at 828.495 kb on - strand at 828.497 kb on - strand at 828.513 kb on - strand at 828.513 kb on - strand at 828.543 kb on + strand at 828.544 kb on - strand at 828.553 kb on + strand at 828.553 kb on + strand at 828.554 kb on - strand at 828.554 kb on - strand at 828.554 kb on - strand at 828.558 kb on + strand at 828.574 kb on + strand at 828.575 kb on - strand at 828.575 kb on - strand at 828.619 kb on + strand at 828.619 kb on + strand at 828.639 kb on + strand at 828.639 kb on + strand at 828.639 kb on + strand at 828.642 kb on + strand at 828.643 kb on - strand at 828.687 kb on - strand at 828.776 kb on - strand at 828.779 kb on + strand at 828.866 kb on - strand, within Echvi_0739 at 828.878 kb on + strand, within Echvi_0739 at 828.879 kb on - strand, within Echvi_0739 at 828.884 kb on + strand, within Echvi_0739 at 828.884 kb on + strand, within Echvi_0739 at 828.885 kb on - strand, within Echvi_0739 at 828.923 kb on + strand, within Echvi_0739 at 828.924 kb on - strand, within Echvi_0739 at 829.011 kb on + strand, within Echvi_0739 at 829.021 kb on - strand, within Echvi_0739 at 829.021 kb on - strand, within Echvi_0739 at 829.025 kb on + strand, within Echvi_0739 at 829.026 kb on - strand, within Echvi_0739 at 829.032 kb on + strand, within Echvi_0739 at 829.034 kb on + strand, within Echvi_0739 at 829.035 kb on - strand, within Echvi_0739 at 829.048 kb on + strand, within Echvi_0739 at 829.049 kb on - strand, within Echvi_0739 at 829.049 kb on - strand, within Echvi_0739 at 829.054 kb on - strand, within Echvi_0739 at 829.155 kb on + strand, within Echvi_0739 at 829.156 kb on - strand, within Echvi_0739 at 829.157 kb on + strand, within Echvi_0739 at 829.157 kb on + strand, within Echvi_0739 at 829.158 kb on - strand, within Echvi_0739 at 829.170 kb on + strand, within Echvi_0739 at 829.174 kb on + strand, within Echvi_0739 at 829.188 kb on + strand, within Echvi_0739 at 829.224 kb on + strand, within Echvi_0739 at 829.429 kb on - strand, within Echvi_0739 at 829.431 kb on - strand, within Echvi_0739 at 829.441 kb on + strand at 829.442 kb on - strand, within Echvi_0739
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucosamine Hydrochloride (C) remove 826,184 + +0.4 826,184 + -0.7 826,185 - +0.2 826,185 - +0.0 826,185 - -0.3 826,185 - +1.5 826,233 + -1.0 826,272 - -1.0 826,301 + -0.2 826,366 + Echvi_0737 0.19 -0.5 826,366 + Echvi_0737 0.19 -2.6 826,391 - Echvi_0737 0.23 +1.4 826,474 + Echvi_0737 0.36 -0.9 826,475 - Echvi_0737 0.36 -1.9 826,495 + Echvi_0737 0.39 +0.1 826,540 - Echvi_0737 0.46 +0.3 826,631 - Echvi_0737 0.61 -0.3 826,735 + Echvi_0737 0.77 -1.0 826,745 + Echvi_0737 0.79 -0.0 826,746 - Echvi_0737 0.79 -0.0 826,746 - Echvi_0737 0.79 -0.9 826,746 - Echvi_0737 0.79 +0.5 826,747 + Echvi_0737 0.79 +1.1 826,747 + Echvi_0737 0.79 -0.1 826,747 + Echvi_0737 0.79 +0.5 826,749 + Echvi_0737 0.79 -0.3 826,749 + Echvi_0737 0.79 -1.1 826,749 + Echvi_0737 0.79 -0.6 826,749 + Echvi_0737 0.79 -0.2 826,750 - Echvi_0737 0.79 +0.1 826,750 - Echvi_0737 0.79 -1.1 826,750 - Echvi_0737 0.79 +0.6 826,750 - Echvi_0737 0.79 +0.5 826,750 - Echvi_0737 0.79 -1.5 826,750 - Echvi_0737 0.79 +0.7 826,750 - Echvi_0737 0.79 +0.8 826,750 - Echvi_0737 0.79 -1.0 826,777 - Echvi_0737 0.84 -0.7 826,796 - Echvi_0737 0.87 +0.3 826,858 + -0.1 826,951 - -1.5 826,979 - -0.0 826,992 + -1.1 827,031 - +0.4 827,038 - +1.3 827,038 - -0.7 827,040 + -0.2 827,041 - +0.6 827,041 - -1.7 827,043 + +2.2 827,050 - +0.4 827,063 + -0.7 827,063 + -1.3 827,064 - +0.7 827,095 + -0.5 827,095 + -0.3 827,111 + -0.9 827,189 + +1.8 827,288 + Echvi_0738 0.14 -1.2 827,289 - Echvi_0738 0.14 -0.2 827,289 - Echvi_0738 0.14 +0.7 827,436 + Echvi_0738 0.25 -0.7 827,436 + Echvi_0738 0.25 -0.0 827,436 + Echvi_0738 0.25 -2.5 827,437 - Echvi_0738 0.25 +0.2 827,437 - Echvi_0738 0.25 -0.4 827,437 - Echvi_0738 0.25 -0.5 827,437 - Echvi_0738 0.25 -0.8 827,437 - Echvi_0738 0.25 +1.0 827,437 - Echvi_0738 0.25 +0.1 827,437 - Echvi_0738 0.25 +0.2 827,479 + Echvi_0738 0.28 -0.6 827,479 + Echvi_0738 0.28 -0.9 827,479 + Echvi_0738 0.28 -1.6 827,479 + Echvi_0738 0.28 -0.7 827,479 + Echvi_0738 0.28 -0.1 827,480 - Echvi_0738 0.28 -1.4 827,480 - Echvi_0738 0.28 +0.3 827,480 - Echvi_0738 0.28 -0.3 827,480 - Echvi_0738 0.28 +0.0 827,480 - Echvi_0738 0.28 +1.5 827,480 - Echvi_0738 0.28 +0.1 827,480 - Echvi_0738 0.28 +0.1 827,480 - Echvi_0738 0.28 +0.5 827,560 - Echvi_0738 0.34 -0.9 827,608 + Echvi_0738 0.37 -0.6 827,702 + Echvi_0738 0.44 +0.5 827,733 + Echvi_0738 0.47 -1.2 827,740 - Echvi_0738 0.47 +0.1 827,859 + Echvi_0738 0.56 -0.6 827,860 - Echvi_0738 0.56 -1.8 828,076 + Echvi_0738 0.72 -0.7 828,077 - Echvi_0738 0.72 +0.3 828,261 + Echvi_0738 0.85 -0.4 828,262 - Echvi_0738 0.85 +0.5 828,274 - Echvi_0738 0.86 +1.2 828,343 + -1.2 828,383 - -0.1 828,383 - -0.2 828,383 - -0.4 828,388 + -0.3 828,389 - -0.2 828,389 - -0.6 828,492 - +0.8 828,494 + +0.5 828,495 - -0.4 828,497 - -1.3 828,513 - +0.6 828,513 - -0.2 828,543 + +2.8 828,544 - +1.3 828,553 + -0.2 828,553 + +0.1 828,554 - +0.2 828,554 - -0.7 828,554 - -0.2 828,558 + +0.8 828,574 + +0.4 828,575 - -0.5 828,575 - +0.0 828,619 + -0.2 828,619 + +0.3 828,639 + -1.4 828,639 + +0.0 828,639 + +0.1 828,642 + -0.9 828,643 - -0.5 828,687 - -0.0 828,776 - -0.6 828,779 + -2.2 828,866 - Echvi_0739 0.14 -0.8 828,878 + Echvi_0739 0.16 +0.5 828,879 - Echvi_0739 0.16 -0.2 828,884 + Echvi_0739 0.16 +0.5 828,884 + Echvi_0739 0.16 -0.9 828,885 - Echvi_0739 0.16 -1.0 828,923 + Echvi_0739 0.21 -1.4 828,924 - Echvi_0739 0.21 -1.6 829,011 + Echvi_0739 0.31 -1.6 829,021 - Echvi_0739 0.32 -0.3 829,021 - Echvi_0739 0.32 -2.0 829,025 + Echvi_0739 0.33 -0.8 829,026 - Echvi_0739 0.33 -2.4 829,032 + Echvi_0739 0.34 -1.6 829,034 + Echvi_0739 0.34 -3.4 829,035 - Echvi_0739 0.34 -0.8 829,048 + Echvi_0739 0.35 -0.7 829,049 - Echvi_0739 0.36 -1.4 829,049 - Echvi_0739 0.36 -0.0 829,054 - Echvi_0739 0.36 -1.6 829,155 + Echvi_0739 0.48 -1.6 829,156 - Echvi_0739 0.48 -1.5 829,157 + Echvi_0739 0.48 -0.2 829,157 + Echvi_0739 0.48 -1.5 829,158 - Echvi_0739 0.48 -0.6 829,170 + Echvi_0739 0.50 -1.0 829,174 + Echvi_0739 0.50 +0.0 829,188 + Echvi_0739 0.52 -2.2 829,224 + Echvi_0739 0.56 -2.6 829,429 - Echvi_0739 0.80 -0.9 829,431 - Echvi_0739 0.80 -0.2 829,441 + +1.8 829,442 - Echvi_0739 0.82 -1.0
Or see this region's nucleotide sequence