Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_5065

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
5,645,175	+		PfGW456L13_5063	0.66	-1.2
5,645,176	-		PfGW456L13_5063	0.66	+0.1
5,645,176	-		PfGW456L13_5063	0.66	-0.7
5,645,176	-		PfGW456L13_5063	0.66	-0.3
5,645,177	+		PfGW456L13_5063	0.66	-1.1
5,645,217	+		PfGW456L13_5063	0.71	-0.4
5,645,218	-		PfGW456L13_5063	0.71	+0.4
5,645,218	-		PfGW456L13_5063	0.71	-1.1
5,645,277	+		PfGW456L13_5063	0.78	-2.2
5,645,277	+		PfGW456L13_5063	0.78	+0.5
5,645,277	+		PfGW456L13_5063	0.78	-1.3
5,645,278	-		PfGW456L13_5063	0.78	-0.5
5,645,278	-		PfGW456L13_5063	0.78	-1.0
5,645,278	-		PfGW456L13_5063	0.78	-0.3
5,645,278	-		PfGW456L13_5063	0.78	-0.6
5,645,278	-		PfGW456L13_5063	0.78	-1.8
5,645,278	-		PfGW456L13_5063	0.78	-1.1
5,645,278	-		PfGW456L13_5063	0.78	-0.7
5,645,289	+		PfGW456L13_5063	0.79	-0.6
5,645,289	+		PfGW456L13_5063	0.79	-0.5
5,645,289	+		PfGW456L13_5063	0.79	-1.7
5,645,290	-		PfGW456L13_5063	0.79	-1.2
5,645,475	+				+0.1
5,645,476	-				+0.7
5,645,719	-		PfGW456L13_5064	0.35	-0.8
5,645,719	-		PfGW456L13_5064	0.35	-0.3
5,645,719	-		PfGW456L13_5064	0.35	-0.8
5,645,775	+		PfGW456L13_5064	0.44	-1.2
5,645,799	-		PfGW456L13_5064	0.47	+0.3
5,645,805	+		PfGW456L13_5064	0.48	-1.5
5,645,806	-		PfGW456L13_5064	0.48	-1.4
5,645,806	-		PfGW456L13_5064	0.48	-0.1
5,645,897	-		PfGW456L13_5064	0.62	-0.4
5,646,001	+		PfGW456L13_5064	0.78	-1.4
5,646,001	+		PfGW456L13_5064	0.78	-0.2
5,646,002	-		PfGW456L13_5064	0.78	-0.5
5,646,002	-		PfGW456L13_5064	0.78	-2.8
5,646,058	+		PfGW456L13_5064	0.87	-0.6
5,646,059	-		PfGW456L13_5064	0.87	-2.2
5,646,059	-		PfGW456L13_5064	0.87	-0.4
5,646,386	+		PfGW456L13_5065	0.21	-0.5
5,646,387	-		PfGW456L13_5065	0.21	+0.4
5,646,533	+		PfGW456L13_5065	0.34	-0.6
5,646,533	+		PfGW456L13_5065	0.34	-1.1
5,646,533	+		PfGW456L13_5065	0.34	-0.7
5,646,533	+		PfGW456L13_5065	0.34	-0.4
5,646,534	-		PfGW456L13_5065	0.34	-0.5
5,646,534	-		PfGW456L13_5065	0.34	-0.7
5,646,534	-		PfGW456L13_5065	0.34	-0.1
5,646,621	+		PfGW456L13_5065	0.42	+0.1
5,646,621	+		PfGW456L13_5065	0.42	-1.5
5,646,621	+		PfGW456L13_5065	0.42	+0.5
5,646,621	+		PfGW456L13_5065	0.42	-3.4
5,646,622	-		PfGW456L13_5065	0.42	-0.1
5,646,622	-		PfGW456L13_5065	0.42	-0.5
5,646,622	-		PfGW456L13_5065	0.42	+0.4
5,646,622	-		PfGW456L13_5065	0.42	-0.9
5,646,624	+		PfGW456L13_5065	0.42	+0.3
5,646,624	+		PfGW456L13_5065	0.42	-0.7
5,646,624	+		PfGW456L13_5065	0.42	-0.3
5,646,625	-		PfGW456L13_5065	0.42	-0.7
5,646,941	-		PfGW456L13_5065	0.69	-2.6
5,646,989	+		PfGW456L13_5065	0.73	-0.9
5,646,990	-		PfGW456L13_5065	0.73	-1.0
5,646,990	-		PfGW456L13_5065	0.73	-0.1
5,646,990	-		PfGW456L13_5065	0.73	-1.4
5,646,990	-		PfGW456L13_5065	0.73	+0.8
5,646,990	-		PfGW456L13_5065	0.73	-1.6
5,647,016	-				-0.5
5,647,016	-		PfGW456L13_5065	0.76	-1.2
5,647,016	-		PfGW456L13_5065	0.76	-0.9
5,647,028	+		PfGW456L13_5065	0.77	-0.6
5,647,028	+		PfGW456L13_5065	0.77	-0.7
5,647,028	+		PfGW456L13_5065	0.77	-0.4
5,647,029	-		PfGW456L13_5065	0.77	-0.3
5,647,029	-		PfGW456L13_5065	0.77	-2.4
5,647,029	-		PfGW456L13_5065	0.77	-0.9
5,647,029	-		PfGW456L13_5065	0.77	-0.5
5,647,032	+		PfGW456L13_5065	0.77	-1.5
5,647,032	+		PfGW456L13_5065	0.77	-0.1
5,647,032	+		PfGW456L13_5065	0.77	-0.8
5,647,032	+		PfGW456L13_5065	0.77	-2.5
5,647,032	+		PfGW456L13_5065	0.77	-0.7
5,647,032	+		PfGW456L13_5065	0.77	-0.9
5,647,033	-		PfGW456L13_5065	0.77	-1.3
5,647,033	-		PfGW456L13_5065	0.77	-0.5
5,647,033	-		PfGW456L13_5065	0.77	-2.0
5,647,033	-		PfGW456L13_5065	0.77	-1.4
5,647,033	-		PfGW456L13_5065	0.77	-1.1
5,647,033	-		PfGW456L13_5065	0.77	+0.3
5,647,033	-		PfGW456L13_5065	0.77	+0.5
5,647,076	+		PfGW456L13_5065	0.81	-0.8
5,647,076	+		PfGW456L13_5065	0.81	-1.2
5,647,107	-		PfGW456L13_5065	0.84	-0.6
5,647,142	+		PfGW456L13_5065	0.87	-0.3
5,647,142	+		PfGW456L13_5065	0.87	+0.5
5,647,142	+		PfGW456L13_5065	0.87	-0.7
5,647,142	+		PfGW456L13_5065	0.87	-0.6
5,647,143	-		PfGW456L13_5065	0.87	-0.8
5,647,143	-		PfGW456L13_5065	0.87	-0.3
5,647,143	-		PfGW456L13_5065	0.87	+0.2
5,647,143	-		PfGW456L13_5065	0.87	-3.0
5,647,143	-		PfGW456L13_5065	0.87	+0.8
5,647,143	-		PfGW456L13_5065	0.87	-1.6
5,647,226	+				-0.2
5,647,226	+				+0.6
5,647,264	+				-0.1
5,647,316	-				-0.6
5,647,372	+				-0.3
5,647,372	+				-2.4
5,647,372	+				+0.7
5,647,372	+				+0.9
5,647,372	+				-0.5
5,647,373	-				-2.2
5,647,373	-				-0.2
5,647,373	-				-0.3
5,647,373	-				-0.6
5,647,373	-				-0.9
5,647,373	-				+0.1
5,647,471	+				-0.1
5,647,472	-				+0.4
5,647,472	-				+0.2
5,647,481	-				-0.6
5,647,530	+				-0.2
5,647,578	-				-0.4
5,647,613	+				-0.2
5,647,630	-				-0.1
5,647,748	+		PfGW456L13_5066	0.25	-0.7
5,647,798	-		PfGW456L13_5066	0.47	-0.9
5,647,877	+		PfGW456L13_5066	0.84	+0.3
5,647,877	+		PfGW456L13_5066	0.84	-0.2
5,647,877	+		PfGW456L13_5066	0.84	+0.0
5,647,877	+		PfGW456L13_5066	0.84	-0.7
5,647,878	-		PfGW456L13_5066	0.84	-1.4
5,647,943	+				+1.6
5,647,944	-				+0.1
5,647,957	+				-0.0
5,647,958	-				-1.1
5,647,958	-				+0.6
5,647,979	+				+0.2
5,647,979	+				+0.1
5,647,980	-				+0.5
5,648,075	+		PfGW456L13_5067	0.10	-0.9
5,648,075	+		PfGW456L13_5067	0.10	+1.4
5,648,076	-		PfGW456L13_5067	0.10	-0.6
5,648,076	-		PfGW456L13_5067	0.10	-0.3
5,648,076	-		PfGW456L13_5067	0.10	-1.2
5,648,114	+		PfGW456L13_5067	0.13	+0.1
5,648,114	+		PfGW456L13_5067	0.13	+0.2
5,648,114	+		PfGW456L13_5067	0.13	+1.2
5,648,115	-		PfGW456L13_5067	0.13	+0.5
5,648,115	-		PfGW456L13_5067	0.13	-1.4
5,648,117	+		PfGW456L13_5067	0.14	+0.3
5,648,118	-		PfGW456L13_5067	0.14	-0.5
5,648,199	-		PfGW456L13_5067	0.21	-0.3
5,648,292	-		PfGW456L13_5067	0.29	-0.4