Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4829

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
5,390,551	-				-0.6
5,390,597	+				+0.8
5,390,684	+				-0.2
5,390,684	+				+0.3
5,390,684	+				+0.4
5,390,684	+				+0.5
5,390,684	+				-2.8
5,390,685	-				-0.7
5,390,686	+				+1.1
5,390,686	+				+0.6
5,390,686	+				+0.5
5,390,686	+				-0.3
5,390,686	+				+0.6
5,390,686	+				+2.0
5,390,686	+				+0.1
5,390,686	+				+0.2
5,390,686	+				+0.6
5,390,687	-				+0.1
5,390,687	-				+1.7
5,390,687	-				+0.4
5,390,687	-				-1.3
5,390,687	-				-0.7
5,390,687	-				+0.5
5,390,687	-				+0.1
5,390,687	-				+0.5
5,390,687	-				+0.1
5,390,687	-				-0.2
5,390,687	-				+0.5
5,390,690	+				+1.9
5,390,690	+				+0.2
5,390,690	+				+0.3
5,390,690	+				+0.0
5,390,690	+				-0.1
5,390,690	+				+0.2
5,390,690	+				+0.6
5,390,690	+				+0.1
5,390,690	+				+1.0
5,390,690	+				-1.4
5,390,690	+				+0.2
5,390,690	+				-2.3
5,390,690	+				+0.0
5,390,690	+				-0.1
5,390,690	+				-0.0
5,390,690	+				+0.9
5,390,690	+				-0.9
5,390,690	+				-0.1
5,390,690	+				+0.6
5,390,690	+				-0.2
5,390,690	+				+0.1
5,390,690	+				+0.4
5,390,690	+				-0.5
5,390,690	+				-0.2
5,390,690	+				+1.0
5,390,690	+				-0.4
5,390,691	-				+0.7
5,390,691	-				+0.6
5,390,691	-				+0.1
5,390,691	-				+1.2
5,390,691	-				+0.8
5,390,691	-				-0.5
5,390,691	-				+0.1
5,390,691	-				+0.0
5,390,691	-				+0.5
5,390,691	-				+0.5
5,390,691	-				-0.2
5,390,691	-				+0.7
5,390,691	-				-0.1
5,390,691	-				+0.1
5,390,691	-				-0.3
5,390,691	-				+0.6
5,390,691	-				+0.5
5,390,691	-				+3.0
5,390,694	+				+0.0
5,390,695	-				-0.0
5,390,695	-				+0.6
5,390,956	+		PfGW456L13_4828	0.46	-0.2
5,390,956	+		PfGW456L13_4828	0.46	-1.3
5,390,956	+		PfGW456L13_4828	0.46	+0.1
5,390,956	+		PfGW456L13_4828	0.46	+0.0
5,390,957	-		PfGW456L13_4828	0.46	-0.7
5,390,957	-		PfGW456L13_4828	0.46	+0.0
5,390,957	-		PfGW456L13_4828	0.46	+1.0
5,391,013	+		PfGW456L13_4828	0.57	+0.0
5,391,304	-				-1.3
5,391,304	-				+0.4
5,391,319	-				-0.3
5,391,349	+				-0.4
5,391,350	-				-0.4
5,391,369	-				-0.7
5,391,404	+				-0.4
5,391,404	+				+0.9
5,391,404	+				+0.1
5,391,405	-				-0.4
5,391,415	+				-0.4
5,391,415	+				-0.4
5,391,416	-				-0.4
5,391,416	-				+0.4
5,391,416	-				-0.4
5,391,416	-				+0.8
5,391,416	-				+1.9
5,391,479	-				+0.9
5,391,491	+				+0.1
5,391,500	+				+0.5
5,391,518	+				+1.4
5,391,519	-				+0.5
5,391,519	-				+0.4
5,391,519	-				+0.1
5,391,519	-				+0.2
5,391,519	-				-0.5
5,391,519	-				+0.2
5,391,522	+				+0.7
5,391,522	+				+1.2
5,391,522	+				+0.3
5,391,522	+				+1.9
5,391,576	+				+0.2
5,391,576	+				+0.6
5,391,576	+				-0.3
5,392,039	-		PfGW456L13_4829	0.70	-0.7
5,392,039	-		PfGW456L13_4829	0.70	-0.6
5,392,209	+				+0.2
5,392,209	+				+0.8
5,392,209	+				+0.2
5,392,209	+				-1.3
5,392,209	+				+0.2
5,392,210	-				-1.0
5,392,210	-				+0.3
5,392,210	-				-0.3
5,392,210	-				+0.3
5,392,210	-				+0.8
5,392,210	-				+0.4
5,392,210	-				-0.3
5,392,210	-				-0.4
5,392,210	-				+0.4
5,392,225	-				+0.5
5,392,225	-				-0.6
5,392,227	+				+0.4
5,392,227	+				+0.8
5,392,227	+				+0.2
5,392,227	+				-0.8
5,392,228	-				+0.0
5,392,310	+				+0.7
5,392,311	-				-0.5
5,392,416	+		PfGW456L13_4830	0.11	-0.1
5,392,417	-		PfGW456L13_4830	0.11	+0.1
5,392,529	+		PfGW456L13_4830	0.21	-0.3
5,392,529	+		PfGW456L13_4830	0.21	+0.7
5,392,529	+		PfGW456L13_4830	0.21	-0.7
5,392,529	+		PfGW456L13_4830	0.21	+0.5
5,392,529	+		PfGW456L13_4830	0.21	-0.0
5,392,529	+		PfGW456L13_4830	0.21	-0.0
5,392,530	-		PfGW456L13_4830	0.21	-0.3
5,392,530	-		PfGW456L13_4830	0.21	-1.0
5,392,573	+		PfGW456L13_4830	0.25	+0.1
5,392,574	-		PfGW456L13_4830	0.25	+1.0
5,392,645	+		PfGW456L13_4830	0.32	+1.6
5,392,646	-		PfGW456L13_4830	0.32	-0.9
5,392,646	-		PfGW456L13_4830	0.32	+0.1
5,392,662	+		PfGW456L13_4830	0.33	-0.0
5,392,662	+		PfGW456L13_4830	0.33	-0.1
5,392,662	+		PfGW456L13_4830	0.33	-0.9
5,392,663	-		PfGW456L13_4830	0.33	-0.0
5,392,734	+		PfGW456L13_4830	0.40	-0.1
5,392,735	-		PfGW456L13_4830	0.40	-0.6
5,392,735	-		PfGW456L13_4830	0.40	+0.2
5,392,735	-		PfGW456L13_4830	0.40	-0.5
5,392,794	-		PfGW456L13_4830	0.45	+0.1
5,392,857	+		PfGW456L13_4830	0.51	-0.1
5,392,857	+		PfGW456L13_4830	0.51	-1.1
5,392,857	+		PfGW456L13_4830	0.51	+0.2
5,392,857	+		PfGW456L13_4830	0.51	-0.0
5,392,858	-		PfGW456L13_4830	0.51	+0.6
5,392,858	-		PfGW456L13_4830	0.51	+0.0
5,392,858	-		PfGW456L13_4830	0.51	-0.7
5,392,858	-		PfGW456L13_4830	0.51	-1.0
5,392,858	-		PfGW456L13_4830	0.51	+0.0
5,392,858	-		PfGW456L13_4830	0.51	+0.6
5,392,911	+		PfGW456L13_4830	0.56	+0.4
5,392,911	+		PfGW456L13_4830	0.56	+0.9
5,392,911	+		PfGW456L13_4830	0.56	-0.4
5,392,911	+		PfGW456L13_4830	0.56	+0.3
5,392,911	+		PfGW456L13_4830	0.56	-0.5
5,392,911	+		PfGW456L13_4830	0.56	-0.6
5,392,911	+		PfGW456L13_4830	0.56	+0.0
5,392,912	-		PfGW456L13_4830	0.56	-0.1
5,392,912	-		PfGW456L13_4830	0.56	-0.0
5,392,912	-		PfGW456L13_4830	0.56	-0.1
5,392,912	-		PfGW456L13_4830	0.56	+1.0
5,392,980	+		PfGW456L13_4830	0.62	+1.3
5,392,981	-		PfGW456L13_4830	0.62	-1.1
5,392,981	-		PfGW456L13_4830	0.62	-0.6
5,392,981	-		PfGW456L13_4830	0.62	+0.3
5,393,058	+		PfGW456L13_4830	0.69	-0.6
5,393,058	+		PfGW456L13_4830	0.69	+0.8
5,393,058	+		PfGW456L13_4830	0.69	+0.2
5,393,107	-		PfGW456L13_4830	0.73	-0.4