Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4581

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
5,109,685	+		PfGW456L13_4580	0.14	-2.1
5,109,788	+		PfGW456L13_4580	0.23	-1.5
5,109,809	+		PfGW456L13_4580	0.25	-0.7
5,109,810	-		PfGW456L13_4580	0.25	-0.9
5,109,810	-		PfGW456L13_4580	0.25	-1.8
5,109,915	-		PfGW456L13_4580	0.34	-3.0
5,109,915	-		PfGW456L13_4580	0.34	-0.8
5,109,983	+		PfGW456L13_4580	0.40	-0.1
5,109,995	+		PfGW456L13_4580	0.41	-1.8
5,109,995	+		PfGW456L13_4580	0.41	-2.0
5,109,995	+		PfGW456L13_4580	0.41	-1.8
5,109,995	+		PfGW456L13_4580	0.41	-2.1
5,109,995	+		PfGW456L13_4580	0.41	-1.0
5,110,103	+		PfGW456L13_4580	0.51	-2.2
5,110,104	-		PfGW456L13_4580	0.51	-1.9
5,110,104	-		PfGW456L13_4580	0.51	-1.4
5,110,104	-		PfGW456L13_4580	0.51	+1.1
5,110,229	+		PfGW456L13_4580	0.61	-1.3
5,110,230	-		PfGW456L13_4580	0.61	-1.3
5,110,345	-		PfGW456L13_4580	0.71	-1.4
5,110,611	+				-0.7
5,110,612	-				-0.1
5,110,641	+				-2.1
5,110,641	+				+0.0
5,110,641	+				-1.6
5,110,641	+				-1.6
5,110,642	-				-1.5
5,110,642	-				-1.9
5,110,673	+				-1.6
5,110,673	+				-1.1
5,110,673	+				-0.2
5,110,674	-				-2.4
5,110,719	+				-1.2
5,110,719	+				-1.7
5,110,720	-				-0.8
5,110,907	+				-2.5
5,110,907	+				-0.5
5,110,907	+				-1.9
5,110,907	+				-2.2
5,110,908	-				-1.7
5,110,924	+				-1.6
5,110,924	+				-2.9
5,110,924	+				-1.0
5,111,056	+		PfGW456L13_4581	0.12	-2.3
5,111,057	-		PfGW456L13_4581	0.12	-2.3
5,111,057	-		PfGW456L13_4581	0.12	-1.7
5,111,057	-		PfGW456L13_4581	0.12	-0.9
5,111,057	-		PfGW456L13_4581	0.12	-1.9
5,111,147	+		PfGW456L13_4581	0.15	-2.1
5,111,147	+		PfGW456L13_4581	0.15	-0.4
5,111,147	+		PfGW456L13_4581	0.15	-2.8
5,111,148	-		PfGW456L13_4581	0.15	-3.0
5,111,148	-		PfGW456L13_4581	0.15	-0.7
5,111,148	-		PfGW456L13_4581	0.15	+0.5
5,111,148	-		PfGW456L13_4581	0.15	+0.9
5,111,148	-		PfGW456L13_4581	0.15	-1.2
5,111,148	-		PfGW456L13_4581	0.15	-3.5
5,111,148	-		PfGW456L13_4581	0.15	-1.2
5,111,222	+		PfGW456L13_4581	0.17	-2.4
5,111,501	+		PfGW456L13_4581	0.26	-0.8
5,111,501	+		PfGW456L13_4581	0.26	-1.1
5,111,501	+		PfGW456L13_4581	0.26	-0.3
5,111,501	+		PfGW456L13_4581	0.26	-2.5
5,111,501	+		PfGW456L13_4581	0.26	-1.9
5,111,501	+		PfGW456L13_4581	0.26	-2.8
5,111,502	-		PfGW456L13_4581	0.26	-0.5
5,111,502	-		PfGW456L13_4581	0.26	-0.8
5,111,658	-		PfGW456L13_4581	0.31	-1.4
5,111,802	+		PfGW456L13_4581	0.36	-2.3
5,111,803	-		PfGW456L13_4581	0.36	-1.9
5,111,803	-		PfGW456L13_4581	0.36	-2.9
5,112,077	+		PfGW456L13_4581	0.44	-2.4
5,112,077	+		PfGW456L13_4581	0.44	-2.1
5,112,077	+		PfGW456L13_4581	0.44	-1.8
5,112,077	+		PfGW456L13_4581	0.44	-3.3
5,112,077	+		PfGW456L13_4581	0.44	-2.3
5,112,078	-		PfGW456L13_4581	0.44	+0.2
5,112,078	-		PfGW456L13_4581	0.44	-1.5
5,112,257	+		PfGW456L13_4581	0.50	-2.5
5,112,257	+		PfGW456L13_4581	0.50	-0.6
5,112,257	+		PfGW456L13_4581	0.50	-1.2
5,112,311	+		PfGW456L13_4581	0.52	-1.7
5,112,312	-		PfGW456L13_4581	0.52	-2.2
5,112,390	+		PfGW456L13_4581	0.54	-1.2
5,112,390	+		PfGW456L13_4581	0.54	-1.9
5,112,390	+		PfGW456L13_4581	0.54	-2.4
5,112,390	+		PfGW456L13_4581	0.54	-1.5
5,112,391	-		PfGW456L13_4581	0.54	+0.9
5,112,391	-		PfGW456L13_4581	0.54	-2.2
5,112,391	-		PfGW456L13_4581	0.54	-2.7
5,112,604	+		PfGW456L13_4581	0.61	-1.9
5,112,604	+		PfGW456L13_4581	0.61	-0.2
5,112,605	-		PfGW456L13_4581	0.61	-1.1
5,112,866	+		PfGW456L13_4581	0.69	-1.7
5,112,867	-		PfGW456L13_4581	0.69	-2.3
5,112,955	+		PfGW456L13_4581	0.72	-2.3
5,112,955	+		PfGW456L13_4581	0.72	-2.5
5,112,956	-		PfGW456L13_4581	0.72	-0.7
5,112,956	-		PfGW456L13_4581	0.72	+0.2
5,112,959	+		PfGW456L13_4581	0.72	-1.5
5,112,959	+		PfGW456L13_4581	0.72	-1.9
5,112,959	+		PfGW456L13_4581	0.72	-1.2
5,112,959	+		PfGW456L13_4581	0.72	-1.1
5,112,959	+		PfGW456L13_4581	0.72	-0.7
5,112,959	+		PfGW456L13_4581	0.72	-3.1
5,112,959	+		PfGW456L13_4581	0.72	-1.7
5,112,959	+		PfGW456L13_4581	0.72	-1.0
5,112,959	+		PfGW456L13_4581	0.72	-0.1
5,112,959	+		PfGW456L13_4581	0.72	-1.5
5,112,960	-		PfGW456L13_4581	0.72	-2.2
5,112,960	-		PfGW456L13_4581	0.72	-1.7
5,112,960	-		PfGW456L13_4581	0.72	-0.8
5,112,960	-		PfGW456L13_4581	0.72	-1.0
5,112,960	-		PfGW456L13_4581	0.72	-2.4
5,112,960	-		PfGW456L13_4581	0.72	-1.7
5,112,960	-		PfGW456L13_4581	0.72	-2.1
5,112,960	-		PfGW456L13_4581	0.72	-0.1
5,113,001	+		PfGW456L13_4581	0.73	-2.2
5,113,001	+		PfGW456L13_4581	0.73	-2.6
5,113,002	-		PfGW456L13_4581	0.73	-3.1
5,113,056	-		PfGW456L13_4581	0.75	-1.9
5,113,118	+		PfGW456L13_4581	0.77	-4.1
5,113,119	-		PfGW456L13_4581	0.77	-3.3
5,113,142	+		PfGW456L13_4581	0.78	-2.5
5,113,190	+		PfGW456L13_4581	0.79	-2.3
5,113,255	+		PfGW456L13_4581	0.81	-3.5
5,113,255	+		PfGW456L13_4581	0.81	-2.2
5,113,255	+		PfGW456L13_4581	0.81	-1.9
5,113,255	+		PfGW456L13_4581	0.81	-2.9
5,113,255	+		PfGW456L13_4581	0.81	-2.4
5,113,256	-		PfGW456L13_4581	0.81	-2.1
5,113,277	+		PfGW456L13_4581	0.82	-0.6
5,113,316	+		PfGW456L13_4581	0.83	-0.7
5,113,361	+		PfGW456L13_4581	0.85	+0.0
5,113,361	+		PfGW456L13_4581	0.85	-3.1
5,113,361	+		PfGW456L13_4581	0.85	-1.6
5,113,361	+		PfGW456L13_4581	0.85	-1.3
5,113,361	+		PfGW456L13_4581	0.85	-1.9
5,113,361	+		PfGW456L13_4581	0.85	-1.3
5,113,361	+		PfGW456L13_4581	0.85	-1.2
5,113,401	+		PfGW456L13_4581	0.86	-1.9
5,113,401	+		PfGW456L13_4581	0.86	-1.1
5,113,463	+		PfGW456L13_4581	0.88	-3.2
5,113,463	+		PfGW456L13_4581	0.88	-0.3
5,113,463	+		PfGW456L13_4581	0.88	-1.7
5,113,464	-		PfGW456L13_4581	0.88	-2.7
5,113,473	+		PfGW456L13_4581	0.88	-1.9
5,113,473	+		PfGW456L13_4581	0.88	-0.4
5,113,473	+		PfGW456L13_4581	0.88	-1.2
5,113,644	+				-0.9
5,113,714	+				-2.5
5,113,714	+				-1.9
5,113,825	+				-0.9
5,113,880	+				-1.7
5,113,960	+				-2.4
5,114,314	+		PfGW456L13_4582	0.32	+0.2
5,114,380	+		PfGW456L13_4582	0.37	-1.0
5,114,410	+		PfGW456L13_4582	0.39	-1.2
5,114,452	+		PfGW456L13_4582	0.42	-2.5
5,114,452	+		PfGW456L13_4582	0.42	-1.1
5,114,453	-		PfGW456L13_4582	0.42	-1.7
5,114,453	-		PfGW456L13_4582	0.42	-1.1
5,114,554	+		PfGW456L13_4582	0.49	-2.8
5,114,555	-		PfGW456L13_4582	0.49	-0.2
5,114,725	+		PfGW456L13_4582	0.61	-1.1