Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4457

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
4,980,448	+				+0.5
4,980,544	-				+0.7
4,980,572	+				-0.3
4,980,572	+				+0.3
4,980,573	-				-0.4
4,980,573	-				-0.0
4,980,573	-				+0.6
4,980,588	+				-0.6
4,980,589	-				-0.3
4,980,739	+		PfGW456L13_4456	0.22	+0.1
4,980,739	+		PfGW456L13_4456	0.22	+0.8
4,980,740	-		PfGW456L13_4456	0.22	+0.0
4,980,772	+		PfGW456L13_4456	0.28	-0.2
4,980,772	+		PfGW456L13_4456	0.28	+0.0
4,980,772	+		PfGW456L13_4456	0.28	-0.1
4,980,772	+		PfGW456L13_4456	0.28	-0.6
4,980,772	+		PfGW456L13_4456	0.28	+0.1
4,980,772	+		PfGW456L13_4456	0.28	-1.5
4,980,772	+		PfGW456L13_4456	0.28	-0.0
4,980,772	+		PfGW456L13_4456	0.28	-0.5
4,980,772	+		PfGW456L13_4456	0.28	-0.3
4,980,772	+		PfGW456L13_4456	0.28	+1.4
4,980,773	-		PfGW456L13_4456	0.28	-1.5
4,980,773	-		PfGW456L13_4456	0.28	+0.6
4,980,799	+		PfGW456L13_4456	0.32	-1.0
4,980,799	+		PfGW456L13_4456	0.32	+0.3
4,980,799	+		PfGW456L13_4456	0.32	-0.3
4,980,799	+		PfGW456L13_4456	0.32	+0.4
4,980,799	+		PfGW456L13_4456	0.32	-2.3
4,980,799	+		PfGW456L13_4456	0.32	-0.9
4,980,799	+		PfGW456L13_4456	0.32	-0.4
4,980,800	-		PfGW456L13_4456	0.32	-0.1
4,980,800	-		PfGW456L13_4456	0.32	+0.1
4,980,800	-		PfGW456L13_4456	0.32	+0.9
4,980,800	-		PfGW456L13_4456	0.32	+0.5
4,980,800	-		PfGW456L13_4456	0.32	-1.4
4,980,800	-				-1.1
4,980,800	-		PfGW456L13_4456	0.32	-0.1
4,980,870	+		PfGW456L13_4456	0.44	+0.5
4,980,870	+		PfGW456L13_4456	0.44	-0.5
4,980,870	+		PfGW456L13_4456	0.44	+0.7
4,980,870	+		PfGW456L13_4456	0.44	+0.9
4,980,870	+		PfGW456L13_4456	0.44	-1.2
4,980,870	+		PfGW456L13_4456	0.44	-0.5
4,980,870	+		PfGW456L13_4456	0.44	+0.2
4,980,870	+		PfGW456L13_4456	0.44	+0.9
4,980,870	+		PfGW456L13_4456	0.44	+1.5
4,980,870	+		PfGW456L13_4456	0.44	-0.1
4,980,870	+		PfGW456L13_4456	0.44	+0.1
4,980,870	+		PfGW456L13_4456	0.44	-0.2
4,980,870	+		PfGW456L13_4456	0.44	-1.1
4,980,870	+		PfGW456L13_4456	0.44	-1.0
4,980,871	-		PfGW456L13_4456	0.44	-2.0
4,980,871	-		PfGW456L13_4456	0.44	+0.1
4,980,871	-		PfGW456L13_4456	0.44	+0.4
4,980,871	-		PfGW456L13_4456	0.44	+0.5
4,980,871	-		PfGW456L13_4456	0.44	+0.5
4,980,871	-		PfGW456L13_4456	0.44	+0.3
4,980,871	-		PfGW456L13_4456	0.44	+1.0
4,980,871	-		PfGW456L13_4456	0.44	+0.8
4,980,871	-		PfGW456L13_4456	0.44	+0.4
4,980,916	+		PfGW456L13_4456	0.52	-0.0
4,980,916	+		PfGW456L13_4456	0.52	-1.2
4,980,916	+		PfGW456L13_4456	0.52	-1.0
4,980,917	-		PfGW456L13_4456	0.52	-1.4
4,980,917	-		PfGW456L13_4456	0.52	+0.4
4,980,917	-		PfGW456L13_4456	0.52	+0.7
4,980,917	-		PfGW456L13_4456	0.52	-0.1
4,981,212	+				-0.4
4,981,212	+				+0.5
4,981,212	+				-0.0
4,981,212	+				+0.3
4,981,212	+				-0.5
4,981,212	+				+0.1
4,981,212	+				+0.9
4,981,212	+				-1.7
4,981,212	+				-0.6
4,981,212	+				-0.1
4,981,213	-				-0.4
4,981,213	-				+0.9
4,981,213	-				+0.7
4,981,213	-				+1.1
4,981,213	-				+0.2
4,981,213	-				+1.0
4,981,213	-				+0.6
4,981,234	+				-1.3
4,981,234	+				+0.0
4,981,234	+				-0.5
4,981,234	+				-1.1
4,981,234	+				+0.1
4,981,234	+				-0.3
4,981,235	-				+0.6
4,981,235	-				+0.8
4,981,235	-				-0.1
4,981,235	-				-1.6
4,981,235	-				+1.0
4,981,235	-				-0.1
4,981,235	-				-0.8
4,981,255	-				+0.8
4,981,286	+				-0.2
4,981,286	+				-0.1
4,981,286	+				-0.9
4,981,307	-				-0.1
4,981,307	-				-1.9
4,981,318	+				-0.4
4,981,318	+				+0.4
4,981,335	-				-0.4
4,981,335	-				+0.5
4,981,344	-				-2.2
4,981,344	-				+0.5
4,981,528	+		PfGW456L13_4457	0.28	-0.7
4,981,604	+		PfGW456L13_4457	0.52	-0.5
4,981,604	+		PfGW456L13_4457	0.52	-0.5
4,981,604	+		PfGW456L13_4457	0.52	+0.1
4,981,605	-		PfGW456L13_4457	0.52	+0.3
4,981,605	-		PfGW456L13_4457	0.52	-1.1
4,981,646	+		PfGW456L13_4457	0.65	-0.4
4,981,646	+		PfGW456L13_4457	0.65	-1.2
4,981,646	+		PfGW456L13_4457	0.65	-0.1
4,981,646	+		PfGW456L13_4457	0.65	-1.5
4,981,646	+		PfGW456L13_4457	0.65	-0.8
4,981,647	-		PfGW456L13_4457	0.65	+0.5
4,981,771	+				-0.2
4,981,771	+				+0.8
4,981,772	-				+0.6
4,981,772	-				-0.9
4,981,772	-				+0.3
4,981,785	+				-0.0
4,981,919	+		PfGW456L13_4458	0.12	-0.5
4,981,919	+		PfGW456L13_4458	0.12	-0.7
4,981,919	+		PfGW456L13_4458	0.12	-0.7
4,981,919	+		PfGW456L13_4458	0.12	-0.1
4,981,920	-		PfGW456L13_4458	0.12	+0.3
4,982,266	+		PfGW456L13_4458	0.50	-0.7
4,982,266	+		PfGW456L13_4458	0.50	+0.4
4,982,267	-		PfGW456L13_4458	0.50	+0.7
4,982,293	-		PfGW456L13_4458	0.53	-0.5
4,982,293	-		PfGW456L13_4458	0.53	-0.1
4,982,293	-		PfGW456L13_4458	0.53	+0.1
4,982,557	+		PfGW456L13_4458	0.81	+0.4
4,982,557	+		PfGW456L13_4458	0.81	+0.3
4,982,557	+		PfGW456L13_4458	0.81	-0.8
4,982,558	-		PfGW456L13_4458	0.81	-1.5
4,982,558	-		PfGW456L13_4458	0.81	+0.2
4,982,597	-		PfGW456L13_4458	0.86	+0.9
4,982,609	+		PfGW456L13_4458	0.87	+0.3
4,982,609	+		PfGW456L13_4458	0.87	+0.6
4,982,610	-		PfGW456L13_4458	0.87	+1.2
4,982,610	-		PfGW456L13_4458	0.87	+0.4
4,982,616	-		PfGW456L13_4458	0.88	+0.2
4,982,674	+				-0.3
4,982,674	+				-0.3
4,982,674	+				-0.2
4,982,675	-				-0.6
4,982,675	-				+0.8
4,982,675	-				-0.2
4,982,675	-				+0.8
4,982,738	+				+0.5
4,982,738	+				-0.4
4,982,738	+				-0.5
4,982,738	+				-0.2
4,982,738	+				-0.7
4,982,738	+				-0.2
4,982,738	+				+1.4
4,982,738	+				-0.6
4,982,738	+				-0.4
4,982,738	+				-0.1
4,982,738	+				-0.6
4,982,738	+				+0.8
4,982,738	+				+0.6
4,982,738	+				-0.1
4,982,738	+				+0.8
4,982,738	+				+1.7
4,982,738	+				+0.1
4,982,738	+				-0.4
4,982,739	-				+1.3
4,982,739	-				+0.5
4,982,739	-				-0.1
4,982,739	-				-0.9
4,982,739	-				-0.4
4,982,739	-				-0.7
4,982,739	-				-0.7
4,982,739	-				+0.9
4,982,739	-				+0.4
4,982,739	-				-0.6
4,982,739	-				-0.6
4,982,739	-				+1.0
4,982,739	-				-1.1
4,982,739	-				+0.5
4,982,739	-				-0.2
4,982,739	-				+0.3
4,982,739	-				+0.7
4,982,739	-				-0.7
4,982,739	-				+0.2
4,982,749	+				+0.1