Experiment: nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_353 and PfGW456L13_354 are separated by 337 nucleotides PfGW456L13_354 and PfGW456L13_355 are separated by 34 nucleotides
PfGW456L13_353 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1), at 412,428 to 413,957
_353
PfGW456L13_354 - Periplasmic septal ring factor with murein hydrolase activity EnvC/YibP, at 414,295 to 415,506
_354
PfGW456L13_355 - Carboxyl-terminal protease (EC 3.4.21.102), at 415,541 to 416,860
_355
Position (kb) 414
415
416 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 413.427 kb on + strand, within PfGW456L13_353 at 413.832 kb on + strand at 413.832 kb on + strand at 413.833 kb on - strand at 413.833 kb on - strand at 413.833 kb on - strand at 413.956 kb on - strand at 413.956 kb on - strand at 413.956 kb on - strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.031 kb on + strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.032 kb on - strand at 414.082 kb on + strand at 414.083 kb on - strand at 414.174 kb on + strand at 414.174 kb on + strand at 414.174 kb on + strand at 414.174 kb on + strand at 414.174 kb on + strand at 414.175 kb on - strand at 414.175 kb on - strand at 414.175 kb on - strand at 414.175 kb on - strand at 414.175 kb on - strand at 414.177 kb on + strand at 414.177 kb on + strand at 414.177 kb on + strand at 414.177 kb on + strand at 414.177 kb on + strand at 414.178 kb on - strand at 414.211 kb on - strand at 414.211 kb on - strand at 414.234 kb on - strand at 414.282 kb on + strand at 414.571 kb on + strand, within PfGW456L13_354 at 414.572 kb on - strand, within PfGW456L13_354 at 414.628 kb on + strand, within PfGW456L13_354 at 414.628 kb on + strand, within PfGW456L13_354 at 414.628 kb on + strand, within PfGW456L13_354 at 414.628 kb on + strand, within PfGW456L13_354 at 414.628 kb on + strand, within PfGW456L13_354 at 414.628 kb on + strand, within PfGW456L13_354 at 414.628 kb on + strand, within PfGW456L13_354 at 414.628 kb on + strand, within PfGW456L13_354 at 414.629 kb on - strand, within PfGW456L13_354 at 414.629 kb on - strand, within PfGW456L13_354 at 414.629 kb on - strand, within PfGW456L13_354 at 414.631 kb on + strand, within PfGW456L13_354 at 414.631 kb on + strand, within PfGW456L13_354 at 414.631 kb on + strand, within PfGW456L13_354 at 414.632 kb on - strand, within PfGW456L13_354 at 414.637 kb on + strand, within PfGW456L13_354 at 414.638 kb on - strand, within PfGW456L13_354 at 414.833 kb on + strand, within PfGW456L13_354 at 414.833 kb on + strand, within PfGW456L13_354 at 414.833 kb on + strand, within PfGW456L13_354 at 414.834 kb on - strand, within PfGW456L13_354 at 414.888 kb on + strand, within PfGW456L13_354 at 414.889 kb on - strand, within PfGW456L13_354 at 414.897 kb on + strand, within PfGW456L13_354 at 414.995 kb on + strand, within PfGW456L13_354 at 414.996 kb on - strand, within PfGW456L13_354 at 415.248 kb on - strand, within PfGW456L13_354 at 415.324 kb on + strand, within PfGW456L13_354 at 415.325 kb on - strand, within PfGW456L13_354 at 415.325 kb on - strand, within PfGW456L13_354 at 415.325 kb on - strand, within PfGW456L13_354 at 415.337 kb on - strand, within PfGW456L13_354 at 415.337 kb on - strand, within PfGW456L13_354 at 415.337 kb on - strand, within PfGW456L13_354 at 415.379 kb on + strand, within PfGW456L13_354 at 415.379 kb on + strand, within PfGW456L13_354 at 415.380 kb on - strand, within PfGW456L13_354 at 415.396 kb on - strand at 415.442 kb on - strand at 415.510 kb on + strand at 415.510 kb on + strand at 415.510 kb on + strand at 415.510 kb on + strand at 415.510 kb on + strand at 415.511 kb on - strand at 415.520 kb on + strand at 415.520 kb on + strand at 415.520 kb on + strand at 415.520 kb on + strand at 415.520 kb on + strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.521 kb on - strand at 415.525 kb on + strand at 415.525 kb on + strand at 415.526 kb on - strand at 415.730 kb on + strand, within PfGW456L13_355 at 415.730 kb on + strand, within PfGW456L13_355 at 415.811 kb on + strand, within PfGW456L13_355 at 415.812 kb on - strand, within PfGW456L13_355 at 416.166 kb on - strand, within PfGW456L13_355 at 416.166 kb on - strand, within PfGW456L13_355
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 200 mM remove 413,427 + PfGW456L13_353 0.65 +1.8 413,832 + +0.5 413,832 + +1.5 413,833 - -0.5 413,833 - -0.2 413,833 - +1.1 413,956 - -0.4 413,956 - +0.2 413,956 - +0.5 414,031 + +0.3 414,031 + -0.5 414,031 + -2.5 414,031 + -0.7 414,031 + +0.2 414,031 + -0.3 414,031 + +0.1 414,031 + -0.3 414,031 + -0.3 414,031 + +0.6 414,031 + -0.3 414,031 + -0.3 414,031 + -1.3 414,031 + -0.8 414,031 + -0.2 414,031 + -0.8 414,032 - -0.2 414,032 - +0.3 414,032 - -0.4 414,032 - -0.5 414,032 - -0.4 414,032 - +0.1 414,032 - -0.8 414,032 - +1.5 414,032 - -0.9 414,032 - -0.9 414,032 - +0.2 414,032 - -0.3 414,032 - -0.0 414,032 - +0.4 414,082 + +0.6 414,083 - -0.2 414,174 + +0.4 414,174 + -1.1 414,174 + -0.9 414,174 + -0.1 414,174 + +1.3 414,175 - -1.2 414,175 - -0.4 414,175 - -1.9 414,175 - -2.2 414,175 - -1.8 414,177 + +0.1 414,177 + -1.9 414,177 + -1.7 414,177 + -2.3 414,177 + -1.3 414,178 - -2.1 414,211 - -3.3 414,211 - -2.6 414,234 - -3.1 414,282 + -3.7 414,571 + PfGW456L13_354 0.23 -0.7 414,572 - PfGW456L13_354 0.23 -1.9 414,628 + PfGW456L13_354 0.27 -2.7 414,628 + PfGW456L13_354 0.27 -1.0 414,628 + PfGW456L13_354 0.27 -1.2 414,628 + PfGW456L13_354 0.27 -2.4 414,628 + PfGW456L13_354 0.27 -2.7 414,628 + PfGW456L13_354 0.27 -1.3 414,628 + PfGW456L13_354 0.27 -2.2 414,628 + PfGW456L13_354 0.27 -3.5 414,629 - PfGW456L13_354 0.28 -1.1 414,629 - PfGW456L13_354 0.28 -2.1 414,629 - PfGW456L13_354 0.28 -1.2 414,631 + PfGW456L13_354 0.28 -0.3 414,631 + PfGW456L13_354 0.28 -2.5 414,631 + PfGW456L13_354 0.28 -0.9 414,632 - PfGW456L13_354 0.28 -1.0 414,637 + PfGW456L13_354 0.28 -2.3 414,638 - PfGW456L13_354 0.28 -2.1 414,833 + PfGW456L13_354 0.44 -3.6 414,833 + PfGW456L13_354 0.44 +1.7 414,833 + PfGW456L13_354 0.44 -3.9 414,834 - PfGW456L13_354 0.44 -2.7 414,888 + PfGW456L13_354 0.49 -1.8 414,889 - PfGW456L13_354 0.49 -2.1 414,897 + PfGW456L13_354 0.50 -1.6 414,995 + PfGW456L13_354 0.58 -2.2 414,996 - PfGW456L13_354 0.58 -3.8 415,248 - PfGW456L13_354 0.79 -2.3 415,324 + PfGW456L13_354 0.85 -2.2 415,325 - PfGW456L13_354 0.85 -1.7 415,325 - PfGW456L13_354 0.85 -2.6 415,325 - PfGW456L13_354 0.85 -1.4 415,337 - PfGW456L13_354 0.86 -1.8 415,337 - PfGW456L13_354 0.86 -2.2 415,337 - PfGW456L13_354 0.86 -0.6 415,379 + PfGW456L13_354 0.89 -2.5 415,379 + PfGW456L13_354 0.89 -1.6 415,380 - PfGW456L13_354 0.90 -1.9 415,396 - -0.2 415,442 - -2.0 415,510 + +1.8 415,510 + +1.0 415,510 + +0.4 415,510 + +0.0 415,510 + -0.9 415,511 - +0.0 415,520 + +0.1 415,520 + -0.1 415,520 + +0.1 415,520 + -0.3 415,520 + +1.1 415,521 - -0.5 415,521 - +0.0 415,521 - -1.3 415,521 - -0.4 415,521 - -1.6 415,521 - -0.6 415,521 - +0.4 415,521 - +0.4 415,521 - -0.7 415,521 - +0.3 415,521 - -0.6 415,521 - -0.5 415,521 - +1.4 415,525 + -0.4 415,525 + +0.3 415,526 - +0.3 415,730 + PfGW456L13_355 0.14 +2.5 415,730 + PfGW456L13_355 0.14 +0.2 415,811 + PfGW456L13_355 0.20 +0.5 415,812 - PfGW456L13_355 0.21 +1.7 416,166 - PfGW456L13_355 0.47 +1.1 416,166 - PfGW456L13_355 0.47 +0.1
Or see this region's nucleotide sequence