Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3341

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
3,751,414	+				-1.7
3,751,415	-				+1.3
3,751,451	+				+0.4
3,751,451	+				-0.4
3,751,452	-				-1.7
3,751,452	-				-0.7
3,751,452	-				+1.5
3,751,452	-				+0.4
3,751,452	-				+1.7
3,751,452	-				-0.9
3,751,493	+				+0.5
3,751,528	+				+0.9
3,751,528	+				-0.7
3,751,528	+				-0.6
3,751,528	+				-0.6
3,751,528	+				-0.7
3,751,528	+				-0.2
3,751,528	+				+0.1
3,751,529	-				+1.3
3,751,529	-				-0.4
3,751,529	-				+1.7
3,751,529	-				-0.3
3,751,529	-				-0.0
3,751,529	-				-1.8
3,751,529	-				-1.5
3,751,529	-				+0.2
3,751,529	-				-0.7
3,751,542	-				-1.2
3,751,599	-		PfGW456L13_3340	0.14	+0.6
3,751,599	-		PfGW456L13_3340	0.14	-0.7
3,751,599	-				+0.7
3,751,641	+		PfGW456L13_3340	0.20	+0.5
3,751,641	+		PfGW456L13_3340	0.20	-0.3
3,751,717	+		PfGW456L13_3340	0.30	-0.2
3,751,717	+		PfGW456L13_3340	0.30	+1.2
3,751,718	-		PfGW456L13_3340	0.30	+0.9
3,751,718	-		PfGW456L13_3340	0.30	+0.3
3,751,843	+		PfGW456L13_3340	0.46	-1.6
3,751,844	-		PfGW456L13_3340	0.46	+0.2
3,751,844	-		PfGW456L13_3340	0.46	-0.8
3,751,846	+		PfGW456L13_3340	0.46	-0.9
3,751,847	-		PfGW456L13_3340	0.47	-1.0
3,751,847	-		PfGW456L13_3340	0.47	+0.7
3,751,931	-		PfGW456L13_3340	0.58	+0.5
3,751,931	-		PfGW456L13_3340	0.58	-0.6
3,751,931	-		PfGW456L13_3340	0.58	+0.3
3,751,931	-		PfGW456L13_3340	0.58	+1.1
3,751,978	+		PfGW456L13_3340	0.64	+0.4
3,751,978	+		PfGW456L13_3340	0.64	+0.4
3,751,979	-		PfGW456L13_3340	0.64	+0.7
3,751,979	-		PfGW456L13_3340	0.64	-0.4
3,751,979	-		PfGW456L13_3340	0.64	-0.0
3,751,979	-		PfGW456L13_3340	0.64	-1.8
3,751,979	-		PfGW456L13_3340	0.64	-0.5
3,751,979	-		PfGW456L13_3340	0.64	-0.1
3,751,993	+		PfGW456L13_3340	0.66	+0.1
3,751,993	+				-1.9
3,751,993	+		PfGW456L13_3340	0.66	-0.6
3,751,993	+		PfGW456L13_3340	0.66	-0.4
3,751,994	-		PfGW456L13_3340	0.66	-0.4
3,751,994	-		PfGW456L13_3340	0.66	-1.6
3,751,994	-		PfGW456L13_3340	0.66	+0.4
3,751,994	-		PfGW456L13_3340	0.66	+0.6
3,752,254	+				-1.6
3,752,265	-				-1.8
3,752,265	-				-1.4
3,752,344	+				-0.8
3,752,344	+				-0.1
3,752,367	+				+0.7
3,752,367	+				-0.7
3,752,368	-				-1.1
3,752,368	-				+0.1
3,752,695	+		PfGW456L13_3341	0.24	-1.5
3,752,695	+		PfGW456L13_3341	0.24	+1.7
3,752,704	+		PfGW456L13_3341	0.24	-0.5
3,752,704	+		PfGW456L13_3341	0.24	-0.9
3,752,704	+		PfGW456L13_3341	0.24	-1.7
3,752,704	+		PfGW456L13_3341	0.24	-1.8
3,752,704	+		PfGW456L13_3341	0.24	-0.8
3,752,705	-		PfGW456L13_3341	0.24	-1.1
3,752,705	-		PfGW456L13_3341	0.24	-1.4
3,752,705	-		PfGW456L13_3341	0.24	-0.4
3,752,777	-		PfGW456L13_3341	0.29	+0.1
3,752,791	+		PfGW456L13_3341	0.30	+0.1
3,752,872	+		PfGW456L13_3341	0.36	-1.9
3,752,872	+		PfGW456L13_3341	0.36	-0.5
3,752,872	+		PfGW456L13_3341	0.36	-0.9
3,752,872	+		PfGW456L13_3341	0.36	+0.3
3,752,872	+		PfGW456L13_3341	0.36	-0.1
3,752,872	+		PfGW456L13_3341	0.36	-0.2
3,752,977	+		PfGW456L13_3341	0.43	-0.9
3,752,977	+		PfGW456L13_3341	0.43	-1.5
3,753,046	+		PfGW456L13_3341	0.48	-0.9
3,753,047	-		PfGW456L13_3341	0.48	-2.5
3,753,082	+		PfGW456L13_3341	0.51	-2.3
3,753,082	+		PfGW456L13_3341	0.51	-1.3
3,753,082	+		PfGW456L13_3341	0.51	+0.3
3,753,082	+		PfGW456L13_3341	0.51	-1.1
3,753,082	+		PfGW456L13_3341	0.51	+0.3
3,753,083	-		PfGW456L13_3341	0.51	-0.5
3,753,083	-		PfGW456L13_3341	0.51	-0.6
3,753,083	-		PfGW456L13_3341	0.51	-1.1
3,753,169	+		PfGW456L13_3341	0.57	-0.9
3,753,170	-		PfGW456L13_3341	0.57	+1.3
3,753,170	-		PfGW456L13_3341	0.57	+0.3
3,753,646	+				+0.1
3,753,646	+				+0.4
3,753,647	-				-0.5
3,753,647	-				+2.3
3,753,673	+				-0.6
3,753,673	+				+0.3
3,753,674	-				-0.3
3,753,674	-				-0.3
3,753,698	+				+0.4
3,753,698	+				-1.7
3,753,699	-				-1.3
3,753,784	+				+0.2
3,753,784	+				-0.1
3,753,784	+				-0.2
3,753,785	-				-0.9
3,753,785	-				-1.0
3,753,790	+				-0.7
3,753,790	+				+0.1
3,753,790	+				-0.2
3,753,790	+				+0.5
3,753,790	+				+0.5
3,753,791	-				-0.1
3,753,884	+				+0.7
3,753,884	+				+0.2
3,753,884	+				-2.3
3,753,885	-				+0.3
3,753,928	+				-1.3
3,753,928	+				+1.5
3,753,928	+				+0.5
3,753,929	-				+1.0
3,753,929	-				+0.5
3,753,938	+				-0.5
3,753,939	-				+0.5
3,753,939	-				+0.4
3,753,944	-				+0.1
3,753,944	-				+0.5
3,753,944	-				+0.4
3,753,983	-				+0.1
3,754,066	+				+0.1
3,754,067	-				+0.9
3,754,091	-				-1.0
3,754,104	+				-1.5
3,754,146	+				-0.1
3,754,146	+				-0.2
3,754,146	+				-1.0
3,754,193	-		PfGW456L13_3342	0.11	+1.1
3,754,241	-		PfGW456L13_3342	0.14	+0.7
3,754,241	-		PfGW456L13_3342	0.14	-0.7
3,754,289	-		PfGW456L13_3342	0.17	+0.4
3,754,321	+		PfGW456L13_3342	0.18	-0.8
3,754,348	+		PfGW456L13_3342	0.20	+0.7
3,754,348	+		PfGW456L13_3342	0.20	+0.0
3,754,348	+		PfGW456L13_3342	0.20	+0.0
3,754,348	+		PfGW456L13_3342	0.20	+0.4
3,754,349	-		PfGW456L13_3342	0.20	+0.4
3,754,349	-		PfGW456L13_3342	0.20	-0.6
3,754,349	-		PfGW456L13_3342	0.20	+0.4
3,754,349	-		PfGW456L13_3342	0.20	+1.7
3,754,426	+		PfGW456L13_3342	0.24	+0.4
3,754,477	+		PfGW456L13_3342	0.27	-0.0
3,754,609	+		PfGW456L13_3342	0.34	+0.4
3,754,610	-		PfGW456L13_3342	0.34	+0.7
3,754,762	+		PfGW456L13_3342	0.42	-0.9
3,754,762	+		PfGW456L13_3342	0.42	-1.1
3,754,762	+		PfGW456L13_3342	0.42	-0.3
3,754,762	+		PfGW456L13_3342	0.42	-0.8
3,754,763	-		PfGW456L13_3342	0.42	+1.4