Experiment: nitrate 200 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_175 and PfGW456L13_176 are separated by 7 nucleotides PfGW456L13_176 and PfGW456L13_177 are separated by 38 nucleotides
PfGW456L13_175 - Topoisomerase IV subunit A (EC 5.99.1.-), at 200,434 to 202,701
_175
PfGW456L13_176 - Transporter, at 202,709 to 203,191
_176
PfGW456L13_177 - FIG00953138: hypothetical protein, at 203,230 to 204,219
_177
Position (kb) 202
203
204 Strain fitness (log2 ratio) -2
-1
0
1
2 at 202.757 kb on - strand at 202.832 kb on + strand, within PfGW456L13_176 at 202.832 kb on + strand, within PfGW456L13_176 at 202.832 kb on + strand, within PfGW456L13_176 at 202.833 kb on - strand, within PfGW456L13_176 at 203.186 kb on + strand at 203.186 kb on + strand at 203.186 kb on + strand at 203.191 kb on + strand at 203.192 kb on - strand at 203.353 kb on + strand, within PfGW456L13_177 at 203.375 kb on + strand, within PfGW456L13_177 at 203.375 kb on + strand, within PfGW456L13_177 at 203.375 kb on + strand, within PfGW456L13_177 at 203.493 kb on + strand, within PfGW456L13_177 at 203.493 kb on + strand, within PfGW456L13_177 at 203.634 kb on + strand, within PfGW456L13_177 at 203.815 kb on + strand, within PfGW456L13_177 at 203.815 kb on + strand, within PfGW456L13_177 at 203.852 kb on + strand, within PfGW456L13_177 at 203.852 kb on + strand, within PfGW456L13_177 at 203.852 kb on + strand, within PfGW456L13_177 at 203.852 kb on + strand, within PfGW456L13_177 at 203.966 kb on - strand, within PfGW456L13_177 at 203.966 kb on - strand, within PfGW456L13_177 at 203.974 kb on + strand, within PfGW456L13_177 at 204.029 kb on + strand, within PfGW456L13_177 at 204.029 kb on + strand, within PfGW456L13_177 at 204.029 kb on + strand, within PfGW456L13_177 at 204.029 kb on + strand, within PfGW456L13_177 at 204.029 kb on + strand, within PfGW456L13_177 at 204.030 kb on - strand, within PfGW456L13_177 at 204.030 kb on - strand, within PfGW456L13_177 at 204.030 kb on - strand, within PfGW456L13_177
Per-strain Table
Position Strand Gene LocusTag Fraction nitrate 200 mM remove 202,757 - +0.5 202,832 + PfGW456L13_176 0.25 -0.7 202,832 + PfGW456L13_176 0.25 -0.8 202,832 + PfGW456L13_176 0.25 +0.1 202,833 - PfGW456L13_176 0.26 -0.5 203,186 + +1.0 203,186 + -0.1 203,186 + -2.1 203,191 + -1.1 203,192 - +1.1 203,353 + PfGW456L13_177 0.12 +2.1 203,375 + PfGW456L13_177 0.15 +0.2 203,375 + PfGW456L13_177 0.15 +0.3 203,375 + PfGW456L13_177 0.15 -1.2 203,493 + PfGW456L13_177 0.27 +0.2 203,493 + PfGW456L13_177 0.27 -1.3 203,634 + PfGW456L13_177 0.41 -0.2 203,815 + PfGW456L13_177 0.59 -0.7 203,815 + PfGW456L13_177 0.59 -1.1 203,852 + PfGW456L13_177 0.63 -0.9 203,852 + PfGW456L13_177 0.63 +0.0 203,852 + PfGW456L13_177 0.63 +0.8 203,852 + PfGW456L13_177 0.63 -0.5 203,966 - PfGW456L13_177 0.74 +1.8 203,966 - PfGW456L13_177 0.74 +0.3 203,974 + PfGW456L13_177 0.75 -0.7 204,029 + PfGW456L13_177 0.81 -0.2 204,029 + PfGW456L13_177 0.81 -1.5 204,029 + PfGW456L13_177 0.81 -0.3 204,029 + PfGW456L13_177 0.81 +0.4 204,029 + PfGW456L13_177 0.81 +0.7 204,030 - PfGW456L13_177 0.81 -0.7 204,030 - PfGW456L13_177 0.81 +1.3 204,030 - PfGW456L13_177 0.81 -0.6
Or see this region's nucleotide sequence