Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1686

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
1,857,799	+				+0.1
1,857,800	-				+0.6
1,857,800	-				+0.6
1,857,812	+				+0.6
1,857,847	+				+0.2
1,857,885	-				-0.2
1,857,969	+				+0.2
1,857,971	+				-0.6
1,857,972	-				-1.1
1,857,972	-				-0.8
1,858,152	+				+0.5
1,858,153	-				-2.3
1,858,154	+				+0.6
1,858,183	+				-0.5
1,858,278	+				+0.0
1,858,286	+				-0.3
1,858,298	+				+1.0
1,858,349	+				-0.7
1,858,349	+				-0.5
1,858,445	+				-2.0
1,858,445	+				-0.3
1,858,445	+				+2.0
1,858,445	+				+0.2
1,858,445	+				-1.7
1,858,445	+				+0.0
1,858,446	-				-2.0
1,858,447	+				+1.2
1,858,447	+				+0.4
1,858,447	+				-0.0
1,858,448	-				-3.8
1,858,448	-				-0.8
1,858,449	+				-1.6
1,858,449	+				-0.1
1,858,450	-				-2.4
1,858,451	+				-1.3
1,858,451	+				-2.3
1,858,452	-				-3.0
1,858,487	-				-2.7
1,858,688	+				-0.4
1,858,728	+				-0.4
1,858,827	+		PfGW456L13_1686	0.21	-0.5
1,858,828	-		PfGW456L13_1686	0.21	-0.6
1,858,846	-		PfGW456L13_1686	0.23	-1.5
1,858,846	-		PfGW456L13_1686	0.23	+0.0
1,858,876	+		PfGW456L13_1686	0.27	-0.8
1,858,876	+		PfGW456L13_1686	0.27	-0.7
1,858,876	+		PfGW456L13_1686	0.27	-0.0
1,858,877	-		PfGW456L13_1686	0.27	-1.0
1,858,923	+		PfGW456L13_1686	0.33	-0.3
1,858,923	+		PfGW456L13_1686	0.33	-0.8
1,858,924	-		PfGW456L13_1686	0.33	-2.0
1,858,924	-		PfGW456L13_1686	0.33	-1.2
1,858,924	-		PfGW456L13_1686	0.33	-0.5
1,858,937	+		PfGW456L13_1686	0.35	+0.0
1,858,938	-		PfGW456L13_1686	0.35	-0.1
1,858,938	-		PfGW456L13_1686	0.35	-0.5
1,859,016	+		PfGW456L13_1686	0.45	-1.3
1,859,017	-		PfGW456L13_1686	0.45	-1.7
1,859,017	-		PfGW456L13_1686	0.45	-0.3
1,859,067	+		PfGW456L13_1686	0.51	-0.7
1,859,103	+		PfGW456L13_1686	0.56	-0.1
1,859,104	-		PfGW456L13_1686	0.56	-0.4
1,859,140	-		PfGW456L13_1686	0.61	-1.0
1,859,184	+		PfGW456L13_1686	0.66	+0.7
1,859,184	+		PfGW456L13_1686	0.66	-0.2
1,859,184	+		PfGW456L13_1686	0.66	-0.1
1,859,184	+		PfGW456L13_1686	0.66	-0.1
1,859,184	+		PfGW456L13_1686	0.66	-1.6
1,859,185	-		PfGW456L13_1686	0.66	-1.1
1,859,185	-		PfGW456L13_1686	0.66	-1.0
1,859,367	+		PfGW456L13_1686	0.90	-0.6
1,859,410	-				-1.4
1,859,410	-				+1.9
1,859,506	+				+0.4
1,859,517	+				-0.3
1,859,517	+				+0.0
1,859,517	+				+0.2
1,859,518	-				+1.6
1,859,518	-				+0.4
1,859,518	-				+0.5
1,859,518	-				+1.3
1,859,518	-				-0.8
1,859,518	-				+1.9
1,859,536	+				-0.5
1,859,537	-				+0.5
1,859,677	+				-1.3
1,859,677	+				+1.2
1,859,677	+				+1.0
1,859,677	+				+0.3
1,859,677	+				-0.5
1,859,677	+				+0.1
1,859,677	+				+0.3
1,859,677	+				+0.0
1,859,677	+				+0.4
1,859,677	+				+0.3
1,859,677	+				+0.3
1,859,677	+				+1.7
1,859,677	+				+0.2
1,859,677	+				+0.4
1,859,677	+				-2.4
1,859,677	+				-0.4
1,859,678	-				-0.2
1,859,678	-				+0.2
1,859,678	-				+0.0
1,859,678	-				+0.0
1,859,678	-				+0.4
1,859,678	-				+0.3
1,859,678	-				-1.7
1,859,678	-				+0.8
1,859,678	-				-1.2
1,859,678	-				+0.5
1,859,678	-				-0.8
1,859,678	-				-0.0
1,859,678	-				-0.0
1,859,678	-				+0.5
1,859,678	-				+0.2
1,859,680	-				+0.5
1,859,680	-				+0.5
1,859,680	-				-0.2
1,859,680	-				-0.0
1,859,680	-				-0.1
1,859,680	-				-1.0
1,859,700	-				+0.9
1,859,746	-				+0.5
1,859,999	+		PfGW456L13_1687	0.25	-0.0
1,859,999	+		PfGW456L13_1687	0.25	-0.9
1,860,000	-		PfGW456L13_1687	0.25	-0.6
1,860,000	-		PfGW456L13_1687	0.25	-0.3
1,860,000	-		PfGW456L13_1687	0.25	-0.4
1,860,000	-		PfGW456L13_1687	0.25	+1.0
1,860,000	-		PfGW456L13_1687	0.25	-0.4
1,860,000	-		PfGW456L13_1687	0.25	-1.0
1,860,000	-		PfGW456L13_1687	0.25	+0.3
1,860,000	-		PfGW456L13_1687	0.25	-0.2
1,860,000	-		PfGW456L13_1687	0.25	-0.5
1,860,110	+		PfGW456L13_1687	0.35	-1.5
1,860,110	+		PfGW456L13_1687	0.35	+0.0
1,860,110	+		PfGW456L13_1687	0.35	-0.1
1,860,110	+		PfGW456L13_1687	0.35	+0.2
1,860,110	+		PfGW456L13_1687	0.35	+0.2
1,860,110	+		PfGW456L13_1687	0.35	-0.4
1,860,110	+		PfGW456L13_1687	0.35	-0.4
1,860,110	+		PfGW456L13_1687	0.35	+1.4
1,860,110	+		PfGW456L13_1687	0.35	-0.3
1,860,110	+		PfGW456L13_1687	0.35	+0.3
1,860,110	+		PfGW456L13_1687	0.35	-0.1
1,860,110	+		PfGW456L13_1687	0.35	+0.0
1,860,111	-		PfGW456L13_1687	0.35	+0.6
1,860,111	-		PfGW456L13_1687	0.35	+0.3
1,860,111	-		PfGW456L13_1687	0.35	-0.1
1,860,111	-		PfGW456L13_1687	0.35	+0.8
1,860,111	-		PfGW456L13_1687	0.35	-0.1
1,860,111	-		PfGW456L13_1687	0.35	-1.0
1,860,111	-		PfGW456L13_1687	0.35	+0.7
1,860,111	-		PfGW456L13_1687	0.35	+0.4
1,860,111	-		PfGW456L13_1687	0.35	+0.0
1,860,111	-		PfGW456L13_1687	0.35	+0.7
1,860,111	-		PfGW456L13_1687	0.35	+0.0
1,860,111	-		PfGW456L13_1687	0.35	-0.2
1,860,111	-		PfGW456L13_1687	0.35	+0.0
1,860,111	-		PfGW456L13_1687	0.35	+0.9
1,860,111	-		PfGW456L13_1687	0.35	+0.3
1,860,111	-		PfGW456L13_1687	0.35	+0.9
1,860,111	-		PfGW456L13_1687	0.35	+1.3
1,860,113	+		PfGW456L13_1687	0.35	-0.3
1,860,113	+		PfGW456L13_1687	0.35	+0.1
1,860,113	+		PfGW456L13_1687	0.35	+0.2
1,860,113	+		PfGW456L13_1687	0.35	+0.3
1,860,113	+		PfGW456L13_1687	0.35	+0.0
1,860,113	+		PfGW456L13_1687	0.35	+0.0
1,860,113	+		PfGW456L13_1687	0.35	+0.2
1,860,113	+		PfGW456L13_1687	0.35	-0.2
1,860,113	+		PfGW456L13_1687	0.35	-1.1
1,860,113	+		PfGW456L13_1687	0.35	+0.6
1,860,113	+		PfGW456L13_1687	0.35	+0.0
1,860,114	-				+2.6
1,860,114	-		PfGW456L13_1687	0.36	+1.4
1,860,114	-		PfGW456L13_1687	0.36	+0.6
1,860,156	-		PfGW456L13_1687	0.39	+0.1
1,860,228	-		PfGW456L13_1687	0.46	+0.8
1,860,425	+		PfGW456L13_1687	0.63	+0.0
1,860,425	+		PfGW456L13_1687	0.63	+0.3
1,860,425	+		PfGW456L13_1687	0.63	-1.2
1,860,425	+		PfGW456L13_1687	0.63	+0.5
1,860,426	-		PfGW456L13_1687	0.63	-0.7
1,860,426	-		PfGW456L13_1687	0.63	+0.2