Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1606

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
1,765,272	+		PfGW456L13_1604	0.66	+1.1
1,765,272	+		PfGW456L13_1604	0.66	+2.2
1,765,273	-		PfGW456L13_1604	0.66	-0.3
1,765,273	-		PfGW456L13_1604	0.66	-0.5
1,765,273	-		PfGW456L13_1604	0.66	+0.1
1,765,281	+		PfGW456L13_1604	0.69	+1.7
1,765,281	+		PfGW456L13_1604	0.69	+1.2
1,765,281	+		PfGW456L13_1604	0.69	+0.8
1,765,281	+		PfGW456L13_1604	0.69	+1.3
1,765,281	+		PfGW456L13_1604	0.69	+0.1
1,765,282	-		PfGW456L13_1604	0.69	+0.8
1,765,282	-		PfGW456L13_1604	0.69	+1.2
1,765,282	-		PfGW456L13_1604	0.69	+1.0
1,765,282	-		PfGW456L13_1604	0.69	+1.3
1,765,282	-		PfGW456L13_1604	0.69	+1.4
1,765,282	-		PfGW456L13_1604	0.69	+0.4
1,765,343	-		PfGW456L13_1604	0.88	+0.0
1,765,343	-		PfGW456L13_1604	0.88	-1.7
1,765,370	+				+1.4
1,765,404	-				-1.2
1,765,404	-				+1.2
1,765,533	-				-0.0
1,765,533	-				-0.6
1,765,575	-				+0.9
1,765,690	+				+1.1
1,765,690	+				+0.5
1,765,690	+				+0.5
1,765,690	+				+1.1
1,765,690	+				+0.3
1,765,690	+				+0.1
1,765,690	+				+1.8
1,765,690	+				+1.1
1,765,691	-				+0.1
1,765,691	-				-0.6
1,765,691	-				+0.7
1,765,691	-				-0.4
1,765,736	+				+1.4
1,765,736	+				+1.3
1,765,736	+				+0.7
1,765,736	+				+1.7
1,765,737	-				-0.1
1,765,737	-				+1.5
1,765,737	-				-0.3
1,765,737	-				-2.7
1,765,737	-				+0.3
1,765,738	+				+1.5
1,765,738	+				+0.3
1,765,739	-				-0.0
1,765,739	-				-0.6
1,765,755	+				+0.6
1,765,755	+				+1.5
1,765,755	+				+0.8
1,765,756	-				+0.2
1,765,756	-				+0.7
1,765,756	-				-1.4
1,765,756	-				-0.7
1,765,756	-				-0.2
1,765,759	+				-2.5
1,765,759	+				-0.1
1,765,760	-				-0.3
1,765,760	-				-0.3
1,765,760	-				-0.6
1,765,797	-				-0.3
1,765,797	-				+0.6
1,765,797	-				-1.5
1,765,797	-				-0.1
1,765,797	-				+0.9
1,765,797	-				+0.7
1,765,800	-				+1.0
1,765,800	-				-0.6
1,766,056	-				-0.3
1,766,057	+				-0.0
1,766,057	+				+0.2
1,766,057	+				+1.1
1,766,057	+				+0.7
1,766,057	+				+0.1
1,766,057	+				-1.1
1,766,057	+				+0.0
1,766,058	-				+0.1
1,766,058	-				-0.3
1,766,058	-				+0.2
1,766,058	-				-0.1
1,766,098	+				+1.1
1,766,099	-				+0.5
1,766,099	-				+0.1
1,766,110	+				-0.5
1,766,110	+				+0.2
1,766,111	-				+0.2
1,766,111	-				+0.2
1,766,212	+				-0.2
1,766,214	+				+1.1
1,766,215	-				-1.3
1,766,215	-				-1.5
1,766,474	+		PfGW456L13_1606	0.38	-1.3
1,766,474	+		PfGW456L13_1606	0.38	-1.7
1,766,474	+		PfGW456L13_1606	0.38	-2.1
1,766,474	+		PfGW456L13_1606	0.38	-1.4
1,766,475	-		PfGW456L13_1606	0.38	-1.0
1,766,475	-		PfGW456L13_1606	0.38	-2.5
1,766,602	+		PfGW456L13_1606	0.59	+0.1
1,766,602	+		PfGW456L13_1606	0.59	-1.7
1,766,602	+		PfGW456L13_1606	0.59	-2.3
1,766,602	+		PfGW456L13_1606	0.59	-1.0
1,766,602	+		PfGW456L13_1606	0.59	-1.2
1,766,602	+		PfGW456L13_1606	0.59	-1.5
1,766,602	+		PfGW456L13_1606	0.59	-1.0
1,766,603	-		PfGW456L13_1606	0.60	-2.2
1,766,603	-		PfGW456L13_1606	0.60	-0.4
1,766,603	-		PfGW456L13_1606	0.60	-0.6
1,766,603	-		PfGW456L13_1606	0.60	-3.0
1,766,614	-		PfGW456L13_1606	0.62	-1.3
1,766,626	+		PfGW456L13_1606	0.64	-2.4
1,766,626	+		PfGW456L13_1606	0.64	-1.1
1,766,626	+		PfGW456L13_1606	0.64	-0.1
1,766,626	+		PfGW456L13_1606	0.64	-0.6
1,766,626	+		PfGW456L13_1606	0.64	-0.8
1,766,626	+		PfGW456L13_1606	0.64	-1.9
1,766,626	+		PfGW456L13_1606	0.64	-1.7
1,766,626	+				-0.5
1,766,626	+		PfGW456L13_1606	0.64	-1.7
1,766,626	+		PfGW456L13_1606	0.64	-1.0
1,766,626	+		PfGW456L13_1606	0.64	-1.7
1,766,626	+		PfGW456L13_1606	0.64	-0.9
1,766,626	+		PfGW456L13_1606	0.64	-1.4
1,766,626	+		PfGW456L13_1606	0.64	-1.6
1,766,626	+		PfGW456L13_1606	0.64	+1.1
1,766,626	+		PfGW456L13_1606	0.64	-1.5
1,766,626	+		PfGW456L13_1606	0.64	-1.0
1,766,626	+		PfGW456L13_1606	0.64	-0.9
1,766,626	+		PfGW456L13_1606	0.64	-0.9
1,766,626	+		PfGW456L13_1606	0.64	-2.4
1,766,627	-		PfGW456L13_1606	0.64	-0.9
1,766,627	-		PfGW456L13_1606	0.64	-1.7
1,766,627	-		PfGW456L13_1606	0.64	-2.4
1,766,627	-		PfGW456L13_1606	0.64	-1.2
1,766,627	-		PfGW456L13_1606	0.64	-3.6
1,766,627	-		PfGW456L13_1606	0.64	-2.0
1,766,627	-		PfGW456L13_1606	0.64	-0.9
1,766,627	-		PfGW456L13_1606	0.64	-1.4
1,766,690	-		PfGW456L13_1606	0.75	-1.9
1,766,836	+				+0.2
1,766,946	+				+0.1
1,766,957	-				+0.3
1,767,003	+		PfGW456L13_1607	0.22	-0.2
1,767,052	+		PfGW456L13_1607	0.45	-0.2
1,767,052	+		PfGW456L13_1607	0.45	+0.7
1,767,052	+		PfGW456L13_1607	0.45	+1.0
1,767,052	+		PfGW456L13_1607	0.45	-0.5
1,767,052	+		PfGW456L13_1607	0.45	-1.7
1,767,053	-		PfGW456L13_1607	0.46	+2.7
1,767,053	-		PfGW456L13_1607	0.46	+0.6
1,767,053	-		PfGW456L13_1607	0.46	+0.1
1,767,133	+		PfGW456L13_1607	0.85	+0.3
1,767,206	+				+0.2
1,767,206	+				-2.5
1,767,207	-				-0.7
1,767,237	+				+0.9
1,767,237	+				-0.5
1,767,237	+				-0.4
1,767,237	+				-0.6
1,767,237	+				-0.2
1,767,237	+				-0.2
1,767,237	+				+0.2
1,767,237	+				+0.2
1,767,237	+				+0.6
1,767,238	-				+1.0
1,767,238	-				+0.8
1,767,238	-				+2.1
1,767,238	-				-1.0
1,767,238	-				-0.9
1,767,238	-				-0.3
1,767,238	-				+0.7
1,767,238	-				-0.7
1,767,238	-				-0.4
1,767,238	-				+0.8
1,767,238	-				-0.8
1,767,238	-				-0.8
1,767,238	-				-0.2
1,767,256	+				+1.1
1,767,257	-				-1.1
1,767,257	-				+0.7
1,767,257	-				+0.3
1,767,271	+				+0.3
1,767,272	-				+0.3
1,767,272	-				-0.3
1,767,272	-				-0.4
1,767,296	-				+0.2
1,767,340	+				-0.1
1,767,340	+				+0.3
1,767,340	+				-0.1
1,767,340	+				+0.4
1,767,340	+				+0.3
1,767,341	-				-0.3
1,767,341	-				+0.1
1,767,341	-				-1.2
1,767,381	+				-0.5
1,767,621	+				+0.4
1,767,622	-				-0.2
1,767,642	+				-1.0
1,767,642	+				-0.3
1,767,642	+				+1.1
1,767,643	-				-0.0
1,767,643	-				+0.2
1,767,738	+				-0.1
1,767,738	+				-0.0
1,767,738	+				-0.6
1,767,739	-				+0.6
1,767,808	+				+0.1