Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1337

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
1,479,393	-				+0.4
1,479,443	-				+0.9
1,479,443	-				+1.5
1,479,449	-				-0.5
1,479,449	-				-0.4
1,479,449	-				-0.5
1,479,449	-				-0.2
1,479,449	-				+0.7
1,479,449	-				-1.1
1,479,449	-				+0.1
1,479,449	-				-0.2
1,479,449	-				-0.6
1,479,449	-				+0.1
1,479,449	-				-0.2
1,479,449	-				+0.9
1,479,449	-				+1.1
1,479,449	-				+1.1
1,479,449	-				+0.7
1,479,481	+				+2.5
1,479,482	-				-0.7
1,479,482	-				-0.2
1,479,505	+				+1.0
1,479,505	+				+1.6
1,479,580	+		PfGW456L13_1336	0.11	+0.8
1,479,580	+		PfGW456L13_1336	0.11	-0.5
1,479,580	+		PfGW456L13_1336	0.11	+0.4
1,479,581	-		PfGW456L13_1336	0.11	-1.3
1,479,581	-		PfGW456L13_1336	0.11	-0.1
1,479,581	-		PfGW456L13_1336	0.11	-1.8
1,479,581	-		PfGW456L13_1336	0.11	-0.5
1,479,592	+		PfGW456L13_1336	0.13	-1.5
1,479,593	-		PfGW456L13_1336	0.13	+0.2
1,479,628	+		PfGW456L13_1336	0.17	-1.3
1,479,628	+		PfGW456L13_1336	0.17	-1.2
1,479,628	+		PfGW456L13_1336	0.17	+0.9
1,479,628	+		PfGW456L13_1336	0.17	-0.4
1,479,628	+		PfGW456L13_1336	0.17	-1.5
1,479,629	-		PfGW456L13_1336	0.17	+0.7
1,479,629	-		PfGW456L13_1336	0.17	+1.0
1,479,673	+		PfGW456L13_1336	0.23	+0.2
1,479,674	-		PfGW456L13_1336	0.23	+0.4
1,479,733	+		PfGW456L13_1336	0.30	+0.4
1,479,733	+		PfGW456L13_1336	0.30	-0.4
1,479,733	+		PfGW456L13_1336	0.30	-0.9
1,479,733	+		PfGW456L13_1336	0.30	+0.4
1,479,734	-		PfGW456L13_1336	0.30	+0.8
1,479,734	-		PfGW456L13_1336	0.30	-0.1
1,479,856	+		PfGW456L13_1336	0.45	-0.4
1,479,856	+		PfGW456L13_1336	0.45	-0.3
1,479,857	-		PfGW456L13_1336	0.45	-0.5
1,479,857	-		PfGW456L13_1336	0.45	-0.2
1,479,857	-		PfGW456L13_1336	0.45	-0.9
1,479,857	-		PfGW456L13_1336	0.45	-0.1
1,480,034	-		PfGW456L13_1336	0.67	+2.6
1,480,155	+		PfGW456L13_1336	0.82	+0.0
1,480,155	+		PfGW456L13_1336	0.82	+0.2
1,480,155	+		PfGW456L13_1336	0.82	+0.2
1,480,156	-		PfGW456L13_1336	0.82	-0.9
1,480,156	-		PfGW456L13_1336	0.82	-1.0
1,480,347	+				-0.6
1,480,405	+		PfGW456L13_1337	0.15	-2.5
1,480,405	+		PfGW456L13_1337	0.15	-1.4
1,480,449	-		PfGW456L13_1337	0.22	-1.1
1,480,477	+		PfGW456L13_1337	0.26	-0.6
1,480,477	+		PfGW456L13_1337	0.26	-3.1
1,480,518	-		PfGW456L13_1337	0.32	-0.7
1,480,613	+		PfGW456L13_1337	0.47	-1.0
1,480,637	+		PfGW456L13_1337	0.50	-1.3
1,480,637	+		PfGW456L13_1337	0.50	-1.8
1,480,638	-		PfGW456L13_1337	0.51	-0.0
1,480,706	+		PfGW456L13_1337	0.61	-3.1
1,480,706	+		PfGW456L13_1337	0.61	-1.1
1,480,706	+		PfGW456L13_1337	0.61	-1.3
1,480,706	+		PfGW456L13_1337	0.61	-1.5
1,480,706	+		PfGW456L13_1337	0.61	-1.3
1,480,706	+		PfGW456L13_1337	0.61	-2.2
1,480,706	+		PfGW456L13_1337	0.61	-1.9
1,480,706	+		PfGW456L13_1337	0.61	-1.2
1,480,707	-		PfGW456L13_1337	0.61	-1.9
1,480,707	-		PfGW456L13_1337	0.61	-0.8
1,480,707	-		PfGW456L13_1337	0.61	-0.8
1,480,707	-		PfGW456L13_1337	0.61	-0.5
1,480,707	-		PfGW456L13_1337	0.61	-0.5
1,480,707	-		PfGW456L13_1337	0.61	-2.6
1,480,707	-		PfGW456L13_1337	0.61	-1.2
1,480,707	-		PfGW456L13_1337	0.61	-0.8
1,480,707	-		PfGW456L13_1337	0.61	+0.1
1,480,880	+		PfGW456L13_1337	0.87	-2.1
1,480,880	+		PfGW456L13_1337	0.87	-1.8
1,480,881	-		PfGW456L13_1337	0.88	-1.2
1,480,881	-		PfGW456L13_1337	0.88	-1.0
1,480,895	+		PfGW456L13_1337	0.90	-1.5
1,480,896	-		PfGW456L13_1337	0.90	-1.6
1,480,896	-		PfGW456L13_1337	0.90	-1.6
1,480,903	+				-2.4
1,480,904	-				-3.1
1,480,904	-				-2.0
1,480,904	-				-3.4
1,481,024	+				-1.0
1,481,024	+				+0.0
1,481,036	+				+0.3
1,481,036	+				+0.3
1,481,037	-				-0.3
1,481,046	+				-0.7
1,481,047	-				+0.2
1,481,047	-				-1.1
1,481,047	-				+1.0
1,481,068	+				-0.6
1,481,068	+				-0.7
1,481,068	+				-1.0
1,481,069	-				+0.1
1,481,069	-				-1.2
1,481,070	+				-0.7
1,481,070	+				-2.2
1,481,070	+				-0.0
1,481,070	+				-0.8
1,481,070	+				-0.5
1,481,071	-				-0.1
1,481,071	-				-0.3
1,481,071	-				-1.0
1,481,071	-				+1.1
1,481,176	+				-0.6
1,481,176	+				+1.1
1,481,176	+				-2.0
1,481,176	+				-1.2
1,481,177	-				-1.2
1,481,194	+				-1.2
1,481,194	+				-0.4
1,481,194	+				-0.8
1,481,194	+				+0.4
1,481,194	+				+0.4
1,481,194	+				-0.9
1,481,195	-				+0.3
1,481,195	-				+0.2
1,481,261	+				-0.8
1,481,261	+				+0.7
1,481,261	+				+0.8
1,481,261	+				-0.5
1,481,261	+				-2.3
1,481,261	+				-0.4
1,481,262	-				-0.2
1,481,262	-				+0.8
1,481,262	-				+0.2
1,481,262	-				-0.2
1,481,262	-				+0.6
1,481,262	-				+0.1
1,481,303	+		PfGW456L13_1338	0.15	-0.7
1,481,303	+		PfGW456L13_1338	0.15	-1.1
1,481,303	+		PfGW456L13_1338	0.15	-1.2
1,481,304	-		PfGW456L13_1338	0.15	+0.0
1,481,438	+		PfGW456L13_1338	0.44	-0.3
1,481,438	+		PfGW456L13_1338	0.44	+0.1
1,481,438	+		PfGW456L13_1338	0.44	+0.5
1,481,438	+		PfGW456L13_1338	0.44	-0.2
1,481,438	+		PfGW456L13_1338	0.44	-0.5
1,481,438	+		PfGW456L13_1338	0.44	-0.1
1,481,438	+		PfGW456L13_1338	0.44	-0.4
1,481,438	+		PfGW456L13_1338	0.44	+0.8
1,481,438	+		PfGW456L13_1338	0.44	-0.4
1,481,438	+		PfGW456L13_1338	0.44	-0.5
1,481,439	-		PfGW456L13_1338	0.45	+0.5
1,481,439	-		PfGW456L13_1338	0.45	-0.4
1,481,442	+		PfGW456L13_1338	0.45	+0.0
1,481,442	+		PfGW456L13_1338	0.45	-0.8
1,481,442	+		PfGW456L13_1338	0.45	-0.3
1,481,443	-		PfGW456L13_1338	0.45	+0.8
1,481,443	-		PfGW456L13_1338	0.45	+0.7
1,481,443	-		PfGW456L13_1338	0.45	-0.3
1,481,443	-		PfGW456L13_1338	0.45	-0.3
1,481,443	-		PfGW456L13_1338	0.45	+0.3
1,481,443	-		PfGW456L13_1338	0.45	-1.2
1,481,443	-		PfGW456L13_1338	0.45	-0.6
1,481,443	-		PfGW456L13_1338	0.45	-0.1
1,481,443	-		PfGW456L13_1338	0.45	-0.5
1,481,493	-		PfGW456L13_1338	0.56	+0.4
1,481,546	+		PfGW456L13_1338	0.68	-2.2
1,481,546	+		PfGW456L13_1338	0.68	+0.0
1,481,546	+		PfGW456L13_1338	0.68	-1.2
1,481,547	-		PfGW456L13_1338	0.68	-0.6
1,481,547	-		PfGW456L13_1338	0.68	-0.4
1,481,547	-		PfGW456L13_1338	0.68	-0.1
1,481,547	-		PfGW456L13_1338	0.68	+0.4
1,481,547	-		PfGW456L13_1338	0.68	-0.3
1,481,621	+		PfGW456L13_1338	0.84	-1.1
1,481,621	+		PfGW456L13_1338	0.84	-0.4
1,481,621	+		PfGW456L13_1338	0.84	+0.5
1,481,622	-		PfGW456L13_1338	0.84	-0.0
1,481,697	+				+0.8
1,481,697	+				+0.5
1,481,697	+				+0.2
1,481,697	+				-0.5
1,481,698	-				-0.2
1,481,698	-				+1.0
1,481,698	-				+1.4
1,481,698	-				+1.2
1,481,698	-				+0.9
1,481,723	+				+0.5
1,481,723	+				+0.7
1,481,723	+				-0.7
1,481,723	+				+0.5
1,481,723	+				+0.1
1,481,723	+				-0.1
1,481,723	+				-1.2
1,481,723	+				-0.8
1,481,723	+				+0.7
1,481,723	+				-0.2
1,481,723	+				-0.4
1,481,723	+				+0.4
1,481,723	+				+1.0
1,481,723	+				+0.1
1,481,723	+				+0.1
1,481,723	+				-0.1
1,481,723	+				-0.4
1,481,724	-				-1.2
1,481,724	-				-0.3
1,481,724	-				-0.5
1,481,724	-				+1.0
1,481,724	-				+0.1
1,481,724	-				+0.5
1,481,724	-				-1.2
1,481,724	-				+0.7
1,481,724	-				-0.6
1,481,784	+				+1.0
1,481,942	+		PfGW456L13_1339	0.16	-0.8
1,481,942	+		PfGW456L13_1339	0.16	-0.1
1,481,943	-		PfGW456L13_1339	0.16	+0.6
1,481,943	-		PfGW456L13_1339	0.16	+2.7