Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1048

Experiment: nitrate 200 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	nitrate 200 mM
1,160,545	+		PfGW456L13_1046	0.75	+0.0
1,160,546	-		PfGW456L13_1046	0.76	+0.9
1,160,567	+		PfGW456L13_1046	0.79	-2.6
1,160,568	-		PfGW456L13_1046	0.80	+0.1
1,160,632	+				+1.1
1,160,788	+		PfGW456L13_1047	0.13	-0.4
1,160,788	+		PfGW456L13_1047	0.13	+0.3
1,160,789	-		PfGW456L13_1047	0.13	+1.4
1,160,789	-		PfGW456L13_1047	0.13	-0.0
1,160,789	-		PfGW456L13_1047	0.13	-0.0
1,160,789	-		PfGW456L13_1047	0.13	-0.9
1,160,789	-		PfGW456L13_1047	0.13	+0.7
1,160,865	+		PfGW456L13_1047	0.26	+0.9
1,160,866	-		PfGW456L13_1047	0.26	-1.3
1,161,086	+		PfGW456L13_1047	0.63	+0.0
1,161,086	+		PfGW456L13_1047	0.63	-0.2
1,161,086	+		PfGW456L13_1047	0.63	+0.6
1,161,086	+		PfGW456L13_1047	0.63	+0.3
1,161,086	+		PfGW456L13_1047	0.63	+0.1
1,161,086	+		PfGW456L13_1047	0.63	+0.2
1,161,087	-		PfGW456L13_1047	0.64	-0.8
1,161,114	-		PfGW456L13_1047	0.68	-0.4
1,161,138	+		PfGW456L13_1047	0.72	+0.7
1,161,138	+		PfGW456L13_1047	0.72	-0.1
1,161,138	+		PfGW456L13_1047	0.72	-0.3
1,161,138	+		PfGW456L13_1047	0.72	+1.3
1,161,138	+		PfGW456L13_1047	0.72	-0.0
1,161,138	+		PfGW456L13_1047	0.72	-0.0
1,161,268	+				-0.1
1,161,268	+				+0.7
1,161,268	+				+0.5
1,161,268	+				-0.6
1,161,268	+				-1.2
1,161,268	+				-0.3
1,161,268	+				-0.2
1,161,268	+				-0.2
1,161,268	+				-0.1
1,161,268	+				-0.7
1,161,268	+				-0.4
1,161,268	+				+0.2
1,161,268	+				+1.0
1,161,268	+				-0.2
1,161,269	-				-1.0
1,161,269	-				-0.9
1,161,269	-				-0.4
1,161,269	-				+0.1
1,161,269	-				-0.6
1,161,269	-				-0.6
1,161,269	-				+0.0
1,161,269	-				+1.1
1,161,269	-				-0.2
1,161,269	-				-0.3
1,161,269	-				-0.4
1,161,269	-				+1.1
1,161,269	-				-0.1
1,161,287	+				+0.1
1,161,287	+				+0.5
1,161,288	-				-0.3
1,161,288	-				+0.0
1,161,298	+				-0.0
1,161,298	+				-0.9
1,161,298	+				-0.2
1,161,298	+				-0.5
1,161,298	+				-0.0
1,161,298	+				+0.0
1,161,298	+				-0.8
1,161,298	+				+0.2
1,161,298	+				+0.5
1,161,299	-				-0.8
1,161,299	-				-0.1
1,161,312	+				-0.3
1,161,312	+				-0.7
1,161,312	+				-0.5
1,161,313	-				-0.2
1,161,313	-				-0.1
1,161,313	-				+0.6
1,161,313	-				+0.1
1,161,313	-				-0.1
1,161,333	+				-0.2
1,161,334	-				-0.6
1,161,372	+				-0.4
1,161,475	+				+3.6
1,161,475	+				+0.9
1,161,617	+				+1.6
1,161,617	+				+0.5
1,161,617	+				+1.7
1,161,868	+		PfGW456L13_1048	0.21	+0.0
1,161,869	-		PfGW456L13_1048	0.21	+1.6
1,161,888	+		PfGW456L13_1048	0.22	-2.0
1,161,888	+		PfGW456L13_1048	0.22	+2.0
1,161,888	+		PfGW456L13_1048	0.22	+0.9
1,161,889	-		PfGW456L13_1048	0.22	+1.6
1,161,889	-		PfGW456L13_1048	0.22	+1.2
1,161,889	-		PfGW456L13_1048	0.22	+1.2
1,162,346	+		PfGW456L13_1048	0.46	+1.8
1,162,346	+		PfGW456L13_1048	0.46	+1.5
1,162,346	+		PfGW456L13_1048	0.46	+1.1
1,162,346	+		PfGW456L13_1048	0.46	+0.9
1,162,346	+		PfGW456L13_1048	0.46	+2.1
1,162,346	+		PfGW456L13_1048	0.46	+1.1
1,162,346	+		PfGW456L13_1048	0.46	+0.9
1,162,346	+		PfGW456L13_1048	0.46	+2.3
1,162,346	+		PfGW456L13_1048	0.46	+1.5
1,162,346	+		PfGW456L13_1048	0.46	+1.4
1,162,346	+		PfGW456L13_1048	0.46	+1.4
1,162,346	+		PfGW456L13_1048	0.46	+1.2
1,162,346	+		PfGW456L13_1048	0.46	+0.6
1,162,347	-		PfGW456L13_1048	0.46	+0.5
1,162,347	-		PfGW456L13_1048	0.46	+1.2
1,162,347	-		PfGW456L13_1048	0.46	+2.9
1,162,347	-		PfGW456L13_1048	0.46	+3.1
1,162,347	-		PfGW456L13_1048	0.46	+0.5
1,162,347	-		PfGW456L13_1048	0.46	+1.3
1,162,347	-		PfGW456L13_1048	0.46	+1.4
1,162,350	+		PfGW456L13_1048	0.47	+1.0
1,162,350	+		PfGW456L13_1048	0.47	+1.1
1,162,350	+		PfGW456L13_1048	0.47	+0.9
1,162,350	+		PfGW456L13_1048	0.47	+1.3
1,162,350	+		PfGW456L13_1048	0.47	+1.5
1,162,350	+		PfGW456L13_1048	0.47	+1.1
1,162,350	+		PfGW456L13_1048	0.47	+1.3
1,162,351	-		PfGW456L13_1048	0.47	+0.7
1,162,351	-		PfGW456L13_1048	0.47	+1.0
1,162,351	-		PfGW456L13_1048	0.47	+1.5
1,162,351	-		PfGW456L13_1048	0.47	-0.2
1,162,351	-		PfGW456L13_1048	0.47	+0.6
1,162,351	-		PfGW456L13_1048	0.47	+0.8
1,162,351	-		PfGW456L13_1048	0.47	+1.3
1,162,351	-		PfGW456L13_1048	0.47	+1.9
1,162,351	-		PfGW456L13_1048	0.47	+1.1
1,162,545	+		PfGW456L13_1048	0.57	+1.7
1,162,545	+		PfGW456L13_1048	0.57	+1.5
1,162,546	-		PfGW456L13_1048	0.57	+2.1
1,162,546	-		PfGW456L13_1048	0.57	+1.4
1,162,592	+		PfGW456L13_1048	0.60	+2.2
1,162,593	-		PfGW456L13_1048	0.60	+1.5
1,162,593	-		PfGW456L13_1048	0.60	+1.2
1,162,593	-		PfGW456L13_1048	0.60	+1.7
1,162,593	-		PfGW456L13_1048	0.60	+2.4
1,162,593	-		PfGW456L13_1048	0.60	+1.8
1,162,593	-		PfGW456L13_1048	0.60	+1.1
1,162,959	-		PfGW456L13_1048	0.79	+1.5
1,163,043	+		PfGW456L13_1048	0.84	+0.4
1,163,044	-		PfGW456L13_1048	0.84	+2.3
1,163,044	-		PfGW456L13_1048	0.84	+1.5
1,163,197	+				+1.2
1,163,198	-				+1.6
1,163,203	+				+1.3
1,163,203	+				+1.2
1,163,204	-				+0.5
1,163,204	-				+0.6
1,163,284	+				+0.8
1,163,285	-				+1.7
1,163,312	+				+0.3
1,163,351	+				+1.4
1,163,351	+				+1.7
1,163,351	+				+1.2
1,163,352	-				+1.8
1,163,352	-				+1.6
1,163,352	-				+2.1
1,163,362	+				+1.7
1,163,362	+				+1.8
1,163,363	-				+0.9
1,163,367	-				+1.4
1,163,411	-				+0.7
1,163,411	-				-0.5
1,163,557	+				+0.9
1,163,557	+				+1.8
1,163,558	-				-0.2
1,163,558	-				-0.2
1,163,558	-				+0.0
1,163,559	+				+0.5
1,163,560	-				+0.0
1,163,560	-				-0.1
1,163,568	+				+0.3
1,163,568	+				+0.9
1,163,568	+				+0.9
1,163,568	+				+0.3
1,163,569	-				+0.2
1,163,569	-				-1.1
1,163,569	-				+0.4
1,163,967	+		PfGW456L13_1049	0.49	-0.3
1,163,967	+		PfGW456L13_1049	0.49	+0.1
1,164,048	+		PfGW456L13_1049	0.59	+0.5
1,164,049	-		PfGW456L13_1049	0.59	-1.3
1,164,049	-		PfGW456L13_1049	0.59	-0.2
1,164,091	-		PfGW456L13_1049	0.64	+0.4
1,164,091	-		PfGW456L13_1049	0.64	+0.3
1,164,243	+		PfGW456L13_1049	0.82	-0.5
1,164,243	+		PfGW456L13_1049	0.82	-0.6
1,164,276	+		PfGW456L13_1049	0.87	+0.1
1,164,276	+		PfGW456L13_1049	0.87	+0.5
1,164,276	+		PfGW456L13_1049	0.87	-1.0
1,164,277	-		PfGW456L13_1049	0.87	-0.4
1,164,277	-		PfGW456L13_1049	0.87	-0.2
1,164,277	-		PfGW456L13_1049	0.87	-0.1
1,164,277	-		PfGW456L13_1049	0.87	+0.6
1,164,282	+		PfGW456L13_1049	0.87	+0.1
1,164,282	+		PfGW456L13_1049	0.87	-0.9
1,164,282	+		PfGW456L13_1049	0.87	-1.8
1,164,282	+		PfGW456L13_1049	0.87	-0.3
1,164,283	-		PfGW456L13_1049	0.87	+0.7
1,164,283	-		PfGW456L13_1049	0.87	-0.9
1,164,283	-		PfGW456L13_1049	0.87	+1.0