Experiment: L-Citrulline (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_14690 and PS417_14695 are separated by 804 nucleotides PS417_14695 and PS417_14700 are separated by 110 nucleotides
PS417_14690: PS417_14690 - chemotaxis protein, at 3,207,977 to 3,209,632
_14690
PS417_14695: PS417_14695 - hypothetical protein, at 3,210,437 to 3,210,859
_14695
PS417_14700: PS417_14700 - hypothetical protein, at 3,210,970 to 3,211,446
_14700
Position (kb)
3210
3211 Strain fitness (log2 ratio)
-2
-1
0
1 at 3209.704 kb on - strand at 3209.704 kb on - strand at 3209.704 kb on - strand at 3209.845 kb on + strand at 3209.888 kb on - strand at 3209.919 kb on - strand at 3210.051 kb on - strand at 3210.113 kb on + strand at 3210.150 kb on + strand at 3210.150 kb on + strand at 3210.161 kb on + strand at 3210.224 kb on + strand at 3210.344 kb on + strand at 3210.375 kb on - strand at 3210.375 kb on - strand at 3210.375 kb on - strand at 3210.380 kb on + strand at 3210.381 kb on - strand at 3210.426 kb on + strand at 3210.439 kb on - strand at 3210.531 kb on + strand, within PS417_14695 at 3210.531 kb on + strand, within PS417_14695 at 3210.532 kb on - strand, within PS417_14695 at 3210.532 kb on - strand, within PS417_14695 at 3210.654 kb on + strand, within PS417_14695 at 3210.655 kb on - strand, within PS417_14695 at 3210.779 kb on + strand, within PS417_14695 at 3210.779 kb on + strand, within PS417_14695 at 3210.780 kb on - strand, within PS417_14695 at 3210.852 kb on + strand at 3210.852 kb on + strand at 3210.852 kb on + strand at 3210.853 kb on - strand at 3210.927 kb on + strand at 3210.927 kb on + strand at 3210.928 kb on - strand at 3210.928 kb on - strand at 3210.928 kb on - strand at 3210.961 kb on + strand at 3210.961 kb on + strand at 3211.250 kb on + strand, within PS417_14700 at 3211.698 kb on + strand at 3211.698 kb on + strand at 3211.698 kb on + strand at 3211.699 kb on - strand at 3211.776 kb on + strand at 3211.776 kb on + strand at 3211.776 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (C) remove 3,209,704 - -1.4 3,209,704 - -0.2 3,209,704 - -0.3 3,209,845 + -0.2 3,209,888 - +0.0 3,209,919 - +1.3 3,210,051 - -0.1 3,210,113 + -0.3 3,210,150 + -1.5 3,210,150 + -0.8 3,210,161 + -0.2 3,210,224 + -0.5 3,210,344 + +0.2 3,210,375 - -0.5 3,210,375 - +0.1 3,210,375 - -0.5 3,210,380 + +0.9 3,210,381 - -0.5 3,210,426 + +0.4 3,210,439 - -0.1 3,210,531 + PS417_14695 0.22 -2.2 3,210,531 + PS417_14695 0.22 -0.7 3,210,532 - PS417_14695 0.22 -0.1 3,210,532 - PS417_14695 0.22 -0.2 3,210,654 + PS417_14695 0.51 -0.4 3,210,655 - PS417_14695 0.52 -2.7 3,210,779 + PS417_14695 0.81 -0.2 3,210,779 + PS417_14695 0.81 -0.3 3,210,780 - PS417_14695 0.81 -0.5 3,210,852 + +0.9 3,210,852 + +0.3 3,210,852 + -0.7 3,210,853 - +0.1 3,210,927 + -0.1 3,210,927 + +0.1 3,210,928 - -0.4 3,210,928 - +0.0 3,210,928 - +1.6 3,210,961 + -0.2 3,210,961 + +0.9 3,211,250 + PS417_14700 0.59 +1.2 3,211,698 + +0.2 3,211,698 + +1.1 3,211,698 + +1.5 3,211,699 - +0.3 3,211,776 + -0.4 3,211,776 + +0.4 3,211,776 + +0.5
Or see this region's nucleotide sequence