Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4390

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
5,247,757	+		Echvi_4389	0.43	-1.5
5,247,757	+		Echvi_4389	0.43	-0.9
5,247,757	+		Echvi_4389	0.43	-1.6
5,247,758	-		Echvi_4389	0.43	-1.1
5,247,761	-		Echvi_4389	0.43	-1.6
5,247,765	-		Echvi_4389	0.44	-0.3
5,247,790	+		Echvi_4389	0.45	-1.6
5,247,799	+		Echvi_4389	0.46	-0.3
5,247,799	+		Echvi_4389	0.46	-1.7
5,247,799	+		Echvi_4389	0.46	-0.5
5,247,799	+		Echvi_4389	0.46	-1.3
5,247,799	+		Echvi_4389	0.46	-1.0
5,247,799	+		Echvi_4389	0.46	-1.0
5,247,799	+		Echvi_4389	0.46	-1.3
5,247,800	-		Echvi_4389	0.46	-2.2
5,247,800	-		Echvi_4389	0.46	-1.7
5,247,800	-		Echvi_4389	0.46	+0.3
5,247,809	+		Echvi_4389	0.46	-1.7
5,247,840	-		Echvi_4389	0.48	-0.4
5,247,840	-		Echvi_4389	0.48	-1.1
5,247,845	+		Echvi_4389	0.48	-0.9
5,247,846	-		Echvi_4389	0.48	-0.1
5,247,846	-		Echvi_4389	0.48	+0.2
5,247,847	+		Echvi_4389	0.48	-0.5
5,247,852	-		Echvi_4389	0.49	+0.7
5,247,858	+		Echvi_4389	0.49	-1.1
5,247,859	-		Echvi_4389	0.49	-0.7
5,247,859	-		Echvi_4389	0.49	-3.2
5,247,859	-		Echvi_4389	0.49	-0.3
5,247,860	+		Echvi_4389	0.49	+0.5
5,247,872	-		Echvi_4389	0.50	-0.4
5,247,875	+		Echvi_4389	0.50	-0.4
5,247,876	-		Echvi_4389	0.50	-1.4
5,247,876	-		Echvi_4389	0.50	+0.2
5,247,882	+		Echvi_4389	0.51	-0.3
5,247,884	+		Echvi_4389	0.51	-0.8
5,247,885	-		Echvi_4389	0.51	-0.2
5,247,901	+		Echvi_4389	0.52	-2.3
5,247,901	+		Echvi_4389	0.52	+1.1
5,247,901	+		Echvi_4389	0.52	-0.6
5,247,902	-		Echvi_4389	0.52	-0.3
5,247,905	+		Echvi_4389	0.52	-2.2
5,247,912	+		Echvi_4389	0.52	-0.9
5,247,912	+		Echvi_4389	0.52	+0.4
5,247,913	-		Echvi_4389	0.52	+0.1
5,247,944	+		Echvi_4389	0.54	-2.3
5,247,945	-		Echvi_4389	0.54	-0.8
5,247,947	+		Echvi_4389	0.54	-1.6
5,247,948	-		Echvi_4389	0.54	-0.7
5,247,948	-		Echvi_4389	0.54	-1.3
5,248,013	+		Echvi_4389	0.58	-1.0
5,248,014	-		Echvi_4389	0.58	-0.4
5,248,014	-		Echvi_4389	0.58	-1.3
5,248,016	+		Echvi_4389	0.58	-1.6
5,248,024	-		Echvi_4389	0.59	-2.1
5,248,127	-		Echvi_4389	0.65	-1.5
5,248,153	-		Echvi_4389	0.66	-0.2
5,248,168	+		Echvi_4389	0.67	-0.6
5,248,173	+		Echvi_4389	0.68	-1.2
5,248,173	+		Echvi_4389	0.68	-0.9
5,248,174	-		Echvi_4389	0.68	+0.1
5,248,196	+		Echvi_4389	0.69	-1.1
5,248,215	+		Echvi_4389	0.70	-0.7
5,248,216	-		Echvi_4389	0.70	-0.7
5,248,218	-		Echvi_4389	0.70	-0.8
5,248,219	+		Echvi_4389	0.70	+0.5
5,248,220	-		Echvi_4389	0.70	+1.2
5,248,232	-		Echvi_4389	0.71	+2.0
5,248,267	+		Echvi_4389	0.73	-0.7
5,248,268	-		Echvi_4389	0.73	-1.1
5,248,268	-		Echvi_4389	0.73	-1.0
5,248,323	-		Echvi_4389	0.76	-0.7
5,248,350	+		Echvi_4389	0.78	-0.8
5,248,379	+		Echvi_4389	0.80	+0.5
5,248,380	-		Echvi_4389	0.80	-0.1
5,248,399	+		Echvi_4389	0.81	-0.3
5,248,400	-		Echvi_4389	0.81	-1.1
5,248,441	-		Echvi_4389	0.83	-0.6
5,248,443	+		Echvi_4389	0.83	+0.2
5,248,449	+		Echvi_4389	0.84	-1.1
5,248,464	+		Echvi_4389	0.85	-1.1
5,248,465	-		Echvi_4389	0.85	-1.7
5,248,487	-		Echvi_4389	0.86	-0.9
5,248,494	-		Echvi_4389	0.86	-0.3
5,248,532	+		Echvi_4389	0.89	-0.5
5,248,532	+		Echvi_4389	0.89	-0.1
5,248,532	+		Echvi_4389	0.89	-0.1
5,248,533	-		Echvi_4389	0.89	-0.1
5,248,535	+		Echvi_4389	0.89	-0.3
5,248,536	-		Echvi_4389	0.89	-1.3
5,248,536	-		Echvi_4389	0.89	-0.8
5,248,547	+		Echvi_4389	0.90	-0.2
5,248,572	-				+0.1
5,248,577	+				+0.5
5,248,603	-				-0.0
5,248,619	+				-0.7
5,248,620	-				-1.4
5,248,852	+				+0.1
5,248,887	+		Echvi_4390	0.12	-0.7
5,248,891	+		Echvi_4390	0.12	+0.0
5,248,891	+		Echvi_4390	0.12	-0.7
5,248,891	+		Echvi_4390	0.12	+0.0
5,248,892	-		Echvi_4390	0.13	-1.7
5,248,895	+		Echvi_4390	0.13	+0.9
5,248,895	+		Echvi_4390	0.13	-0.3
5,248,895	+		Echvi_4390	0.13	+0.0
5,248,896	-		Echvi_4390	0.13	-2.8
5,248,896	-		Echvi_4390	0.13	+0.6
5,248,896	-		Echvi_4390	0.13	-1.1
5,248,896	-		Echvi_4390	0.13	-0.0
5,248,906	+		Echvi_4390	0.14	-0.4
5,248,906	+		Echvi_4390	0.14	+1.6
5,248,917	+		Echvi_4390	0.14	+0.0
5,249,054	+		Echvi_4390	0.25	-0.4
5,249,057	-		Echvi_4390	0.26	-1.2
5,249,108	+		Echvi_4390	0.30	-2.3
5,249,109	-		Echvi_4390	0.30	-0.6
5,249,185	+		Echvi_4390	0.36	-2.0
5,249,214	+		Echvi_4390	0.38	-0.0
5,249,214	+		Echvi_4390	0.38	-0.0
5,249,214	+		Echvi_4390	0.38	-0.1
5,249,215	-		Echvi_4390	0.38	+1.6
5,249,215	-		Echvi_4390	0.38	+0.5
5,249,215	-		Echvi_4390	0.38	+0.5
5,249,215	-		Echvi_4390	0.38	+2.7
5,249,215	-		Echvi_4390	0.38	+0.8
5,249,218	+		Echvi_4390	0.38	-0.4
5,249,219	-		Echvi_4390	0.38	-0.2
5,249,220	+		Echvi_4390	0.38	-0.4
5,249,220	+		Echvi_4390	0.38	+0.2
5,249,311	-		Echvi_4390	0.46	+1.6
5,249,318	+		Echvi_4390	0.46	-0.8
5,249,318	+		Echvi_4390	0.46	+1.2
5,249,318	+		Echvi_4390	0.46	+0.3
5,249,318	+		Echvi_4390	0.46	-1.4
5,249,319	-		Echvi_4390	0.46	+0.1
5,249,339	+		Echvi_4390	0.48	+0.4
5,249,339	+		Echvi_4390	0.48	-0.5
5,249,339	+		Echvi_4390	0.48	-0.0
5,249,340	-		Echvi_4390	0.48	+0.5
5,249,353	-		Echvi_4390	0.49	+0.2
5,249,381	-		Echvi_4390	0.51	-0.3
5,249,386	+		Echvi_4390	0.51	+0.4
5,249,465	+		Echvi_4390	0.58	-0.2
5,249,468	+		Echvi_4390	0.58	-0.1
5,249,472	+		Echvi_4390	0.58	-0.1
5,249,473	-		Echvi_4390	0.58	+2.6
5,249,498	-		Echvi_4390	0.60	-0.2
5,249,553	-		Echvi_4390	0.65	-1.3
5,249,558	-		Echvi_4390	0.65	+0.5
5,249,558	-		Echvi_4390	0.65	-0.3
5,249,559	+		Echvi_4390	0.65	-0.1
5,249,626	+		Echvi_4390	0.70	-2.8
5,249,627	-		Echvi_4390	0.70	-0.2
5,249,658	+		Echvi_4390	0.73	-0.3
5,249,658	+		Echvi_4390	0.73	-0.1
5,249,658	+		Echvi_4390	0.73	+1.1
5,249,659	-		Echvi_4390	0.73	+0.9
5,249,659	-		Echvi_4390	0.73	+0.5
5,249,683	+		Echvi_4390	0.75	-0.3
5,249,687	+		Echvi_4390	0.75	-0.3
5,249,688	-		Echvi_4390	0.75	-0.7
5,249,700	-		Echvi_4390	0.76	+0.1
5,249,700	-		Echvi_4390	0.76	+0.4
5,249,700	-		Echvi_4390	0.76	+0.7
5,249,714	-		Echvi_4390	0.77	+0.4
5,249,726	+		Echvi_4390	0.78	+0.3
5,249,726	+		Echvi_4390	0.78	-0.4
5,249,726	+		Echvi_4390	0.78	+0.9
5,249,727	-		Echvi_4390	0.78	-0.3
5,249,732	-		Echvi_4390	0.79	-0.2
5,249,736	+		Echvi_4390	0.79	-0.3
5,249,736	+		Echvi_4390	0.79	-0.2
5,249,737	-		Echvi_4390	0.79	-0.7
5,249,780	+		Echvi_4390	0.83	-0.5
5,249,780	+		Echvi_4390	0.83	-1.1
5,249,781	-		Echvi_4390	0.83	-0.5
5,249,781	-		Echvi_4390	0.83	+1.7
5,249,781	-		Echvi_4390	0.83	+0.9
5,249,786	+		Echvi_4390	0.83	-1.4
5,249,790	+		Echvi_4390	0.83	-0.0
5,249,790	+		Echvi_4390	0.83	+0.3
5,249,791	-		Echvi_4390	0.83	-0.4
5,249,791	-		Echvi_4390	0.83	-0.6
5,249,804	+		Echvi_4390	0.84	-0.3
5,249,805	-		Echvi_4390	0.84	+0.4
5,249,812	-		Echvi_4390	0.85	-0.2
5,249,815	-		Echvi_4390	0.85	+0.1
5,249,815	-		Echvi_4390	0.85	+1.0
5,249,820	-		Echvi_4390	0.86	+0.5
5,249,820	-		Echvi_4390	0.86	-0.1
5,249,822	-		Echvi_4390	0.86	-1.8
5,249,857	+		Echvi_4390	0.89	+0.1
5,249,890	+				-0.2
5,249,890	+				-0.7
5,249,890	+				-0.5
5,249,892	+				-0.2
5,249,954	-				+0.4
5,249,955	+				-2.2
5,250,032	-				-0.9
5,250,105	+				-1.0
5,250,105	+				-2.4
5,250,106	-				-0.8
5,250,118	+				-1.8
5,250,119	-				-0.9
5,250,119	-				-0.7
5,250,159	+		Echvi_4391	0.11	-1.4
5,250,165	+		Echvi_4391	0.11	-1.3
5,250,165	+		Echvi_4391	0.11	-1.5
5,250,166	-		Echvi_4391	0.11	+0.0
5,250,166	-		Echvi_4391	0.11	-1.6
5,250,166	-		Echvi_4391	0.11	-0.8
5,250,166	-		Echvi_4391	0.11	-1.2
5,250,168	+		Echvi_4391	0.12	-0.8
5,250,168	+		Echvi_4391	0.12	-1.7
5,250,168	+		Echvi_4391	0.12	-1.2
5,250,168	+		Echvi_4391	0.12	-1.3
5,250,168	+		Echvi_4391	0.12	-2.1
5,250,169	-		Echvi_4391	0.12	+0.7
5,250,169	-		Echvi_4391	0.12	-2.2
5,250,169	-		Echvi_4391	0.12	-0.1
5,250,174	+		Echvi_4391	0.12	-1.2
5,250,175	-		Echvi_4391	0.12	-0.6
5,250,183	+		Echvi_4391	0.13	-0.7
5,250,183	+		Echvi_4391	0.13	-0.9
5,250,183	+		Echvi_4391	0.13	-1.6
5,250,217	-		Echvi_4391	0.17	-1.2
5,250,217	-		Echvi_4391	0.17	-0.7
5,250,220	-		Echvi_4391	0.17	-1.3
5,250,250	+		Echvi_4391	0.20	-2.2
5,250,251	-		Echvi_4391	0.20	-0.5
5,250,276	-		Echvi_4391	0.23	-0.9
5,250,330	+		Echvi_4391	0.28	-1.6
5,250,331	-		Echvi_4391	0.28	-3.0
5,250,331	-		Echvi_4391	0.28	-1.3
5,250,352	-		Echvi_4391	0.30	-1.2
5,250,352	-		Echvi_4391	0.30	-0.9
5,250,361	-		Echvi_4391	0.31	-2.3
5,250,380	+		Echvi_4391	0.33	-1.4
5,250,384	+		Echvi_4391	0.34	-1.1
5,250,384	+		Echvi_4391	0.34	+0.9
5,250,384	+		Echvi_4391	0.34	-2.0
5,250,384	+		Echvi_4391	0.34	-3.2
5,250,384	+		Echvi_4391	0.34	-1.5
5,250,384	+		Echvi_4391	0.34	-2.0
5,250,384	+		Echvi_4391	0.34	-1.3
5,250,384	+		Echvi_4391	0.34	-0.7
5,250,384	+		Echvi_4391	0.34	-2.6
5,250,384	+		Echvi_4391	0.34	-2.4
5,250,384	+		Echvi_4391	0.34	-3.3
5,250,384	+		Echvi_4391	0.34	-1.0
5,250,384	+		Echvi_4391	0.34	-2.3
5,250,384	+		Echvi_4391	0.34	-1.5
5,250,384	+		Echvi_4391	0.34	-1.8
5,250,385	-		Echvi_4391	0.34	-0.5
5,250,385	-		Echvi_4391	0.34	-2.1
5,250,385	-		Echvi_4391	0.34	-1.0
5,250,385	-		Echvi_4391	0.34	-0.2
5,250,385	-		Echvi_4391	0.34	-0.4
5,250,385	-		Echvi_4391	0.34	-0.2
5,250,386	+		Echvi_4391	0.34	-2.5
5,250,386	+		Echvi_4391	0.34	-1.5
5,250,387	-		Echvi_4391	0.34	-1.7
5,250,387	-		Echvi_4391	0.34	-1.0
5,250,387	-		Echvi_4391	0.34	-0.6
5,250,387	-		Echvi_4391	0.34	-1.1
5,250,388	+		Echvi_4391	0.34	+0.2
5,250,390	+		Echvi_4391	0.34	-3.2
5,250,390	+		Echvi_4391	0.34	-0.8
5,250,419	+		Echvi_4391	0.37	-0.3
5,250,446	-		Echvi_4391	0.40	-0.6
5,250,449	+		Echvi_4391	0.40	-1.1
5,250,449	+		Echvi_4391	0.40	-3.0
5,250,449	+		Echvi_4391	0.40	-1.3
5,250,449	+		Echvi_4391	0.40	-1.2
5,250,449	+		Echvi_4391	0.40	-1.0
5,250,449	+		Echvi_4391	0.40	-1.8
5,250,449	+		Echvi_4391	0.40	-0.8
5,250,449	+		Echvi_4391	0.40	-3.7
5,250,449	+		Echvi_4391	0.40	-1.6
5,250,449	+		Echvi_4391	0.40	-2.4
5,250,450	-		Echvi_4391	0.40	+0.2
5,250,450	-		Echvi_4391	0.40	-0.4
5,250,450	-		Echvi_4391	0.40	-2.6
5,250,450	-		Echvi_4391	0.40	-0.0
5,250,489	+		Echvi_4391	0.44	-1.5
5,250,489	+		Echvi_4391	0.44	-1.6
5,250,489	+		Echvi_4391	0.44	-0.6
5,250,514	-		Echvi_4391	0.47	-1.4
5,250,517	+		Echvi_4391	0.47	-1.4
5,250,517	+		Echvi_4391	0.47	-1.0
5,250,517	+		Echvi_4391	0.47	-0.3
5,250,518	-		Echvi_4391	0.47	+0.2
5,250,522	+		Echvi_4391	0.48	-0.5
5,250,523	-		Echvi_4391	0.48	+0.5
5,250,523	-		Echvi_4391	0.48	-0.3
5,250,524	+		Echvi_4391	0.48	-0.2
5,250,568	-		Echvi_4391	0.52	-1.0
5,250,586	-		Echvi_4391	0.54	-3.5
5,250,615	+		Echvi_4391	0.57	-2.5
5,250,617	+		Echvi_4391	0.57	-2.7
5,250,635	+		Echvi_4391	0.59	-1.8
5,250,651	-		Echvi_4391	0.61	-2.2
5,250,662	+		Echvi_4391	0.62	-1.4
5,250,663	-		Echvi_4391	0.62	-2.0
5,250,667	+		Echvi_4391	0.62	-1.3
5,250,667	+		Echvi_4391	0.62	-2.8
5,250,668	-		Echvi_4391	0.62	-0.9
5,250,668	-		Echvi_4391	0.62	-0.7
5,250,669	+		Echvi_4391	0.63	-1.9
5,250,670	-		Echvi_4391	0.63	-0.6
5,250,708	-		Echvi_4391	0.67	-1.5
5,250,708	-		Echvi_4391	0.67	+0.2
5,250,715	+		Echvi_4391	0.67	-1.9
5,250,787	+		Echvi_4391	0.75	-2.0
5,250,787	+		Echvi_4391	0.75	-2.0
5,250,793	+		Echvi_4391	0.75	-1.2
5,250,794	-		Echvi_4391	0.75	-1.4
5,250,804	-		Echvi_4391	0.76	-2.7
5,250,805	+		Echvi_4391	0.76	-0.9
5,250,806	-		Echvi_4391	0.77	-1.5
5,250,820	+		Echvi_4391	0.78	-2.9
5,250,820	+		Echvi_4391	0.78	-2.9
5,250,821	-		Echvi_4391	0.78	-1.6
5,250,821	-		Echvi_4391	0.78	-1.4
5,250,849	+		Echvi_4391	0.81	-3.2
5,250,850	-		Echvi_4391	0.81	-1.2
5,250,853	+		Echvi_4391	0.81	-1.5
5,250,853	+		Echvi_4391	0.81	-1.5
5,250,854	-		Echvi_4391	0.81	-2.5
5,250,856	+		Echvi_4391	0.82	-1.6
5,250,856	+		Echvi_4391	0.82	-0.9
5,250,856	+		Echvi_4391	0.82	-1.8
5,250,856	+		Echvi_4391	0.82	-0.6
5,250,856	+		Echvi_4391	0.82	-1.3
5,250,856	+		Echvi_4391	0.82	-1.9
5,250,857	-		Echvi_4391	0.82	-1.3
5,250,857	-		Echvi_4391	0.82	-0.9
5,250,857	-		Echvi_4391	0.82	-0.7
5,250,857	-		Echvi_4391	0.82	-0.6
5,250,857	-		Echvi_4391	0.82	-1.0
5,250,857	-		Echvi_4391	0.82	-1.5
5,250,871	-		Echvi_4391	0.83	-1.1
5,250,898	+		Echvi_4391	0.86	-2.1
5,250,899	-		Echvi_4391	0.86	-1.6
5,250,955	+				-1.1
5,250,955	+				-1.4
5,250,956	-				-1.0
5,250,956	-				-0.7
5,250,956	-				+0.3
5,250,956	-				-1.0
5,250,959	-				-1.7
5,250,959	-				-0.5
5,250,959	-				-1.7
5,250,976	+				-3.0
5,250,977	-				-0.4
5,250,977	-				-0.8
5,250,977	-				-0.3
5,250,977	-				-1.5
5,250,977	-				-1.6
5,250,977	-				-0.5
5,250,979	+				-1.7
5,250,980	-				-1.5
5,250,980	-				-1.1
5,250,985	-				-0.4
5,250,996	+				-2.1
5,250,996	+				-1.6
5,250,997	-				-3.0
5,250,997	-				-1.1