Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3126

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
3,735,343	+				+1.2
3,735,352	+				-0.3
3,735,550	+				-0.6
3,735,588	+				+0.1
3,735,588	+				+0.4
3,735,589	-				-0.1
3,735,589	-				-0.2
3,735,598	+				+0.2
3,735,599	-				+0.2
3,735,612	+				-0.4
3,735,633	-				-0.2
3,735,667	+		Echvi_3125	0.14	-1.8
3,735,668	-		Echvi_3125	0.14	-0.1
3,735,672	+		Echvi_3125	0.14	+0.8
3,735,673	-		Echvi_3125	0.15	+0.4
3,735,673	-		Echvi_3125	0.15	+1.0
3,735,673	-		Echvi_3125	0.15	+0.5
3,735,676	+		Echvi_3125	0.15	+0.7
3,735,677	-		Echvi_3125	0.15	-0.5
3,735,739	-		Echvi_3125	0.26	-0.2
3,735,786	-		Echvi_3125	0.34	+0.2
3,735,802	+		Echvi_3125	0.37	-0.4
3,735,803	-		Echvi_3125	0.37	-0.7
3,735,825	+		Echvi_3125	0.41	-0.5
3,735,826	-		Echvi_3125	0.41	-0.1
3,735,846	+		Echvi_3125	0.45	-0.4
3,735,847	-		Echvi_3125	0.45	-0.9
3,736,005	+		Echvi_3125	0.72	+0.2
3,736,006	-		Echvi_3125	0.72	+0.7
3,736,006	-		Echvi_3125	0.72	+0.0
3,736,050	+		Echvi_3125	0.80	-0.5
3,736,051	-		Echvi_3125	0.80	+1.0
3,736,065	+		Echvi_3125	0.83	+0.2
3,736,071	-		Echvi_3125	0.84	-0.7
3,736,080	+		Echvi_3125	0.85	-1.0
3,736,080	+		Echvi_3125	0.85	-1.2
3,736,095	-		Echvi_3125	0.88	-0.1
3,736,103	+		Echvi_3125	0.89	+0.5
3,736,122	-				-0.0
3,736,155	-				-0.8
3,736,163	-				-0.2
3,736,172	-				-0.9
3,736,195	+				+0.8
3,736,247	+				+1.4
3,736,256	+				+0.8
3,736,284	-				-1.4
3,736,305	+				+1.9
3,736,308	-				+1.6
3,736,339	-				+2.2
3,736,339	-				+0.3
3,736,386	+		Echvi_3126	0.11	+1.1
3,736,404	+		Echvi_3126	0.13	-0.6
3,736,405	-		Echvi_3126	0.13	+0.1
3,736,419	-		Echvi_3126	0.15	+0.2
3,736,424	+		Echvi_3126	0.15	+1.8
3,736,425	-		Echvi_3126	0.15	+0.6
3,736,425	-		Echvi_3126	0.15	+0.9
3,736,446	+		Echvi_3126	0.17	+1.6
3,736,448	+		Echvi_3126	0.18	+0.9
3,736,448	+		Echvi_3126	0.18	+1.2
3,736,449	-		Echvi_3126	0.18	+0.3
3,736,495	+		Echvi_3126	0.23	-0.2
3,736,496	-		Echvi_3126	0.23	+0.6
3,736,496	-		Echvi_3126	0.23	-0.7
3,736,497	+		Echvi_3126	0.23	+1.7
3,736,584	-		Echvi_3126	0.32	-1.2
3,736,593	-		Echvi_3126	0.33	-0.6
3,736,665	-		Echvi_3126	0.40	+0.3
3,736,715	+		Echvi_3126	0.45	+0.8
3,736,715	+		Echvi_3126	0.45	+1.3
3,736,716	-		Echvi_3126	0.46	-0.4
3,736,716	-		Echvi_3126	0.46	+0.1
3,736,716	-		Echvi_3126	0.46	-0.4
3,736,722	+		Echvi_3126	0.46	-0.4
3,736,757	+		Echvi_3126	0.50	+0.9
3,736,758	-		Echvi_3126	0.50	+0.3
3,736,803	-		Echvi_3126	0.55	+1.0
3,736,860	-		Echvi_3126	0.61	+0.0
3,736,869	+		Echvi_3126	0.61	+2.0
3,736,870	-		Echvi_3126	0.62	+0.3
3,736,889	+		Echvi_3126	0.64	+1.8
3,736,947	+		Echvi_3126	0.70	+2.3
3,736,948	-		Echvi_3126	0.70	+1.0
3,736,954	-		Echvi_3126	0.70	-0.0
3,736,966	+		Echvi_3126	0.72	+0.9
3,737,015	-		Echvi_3126	0.77	-0.1
3,737,015	-		Echvi_3126	0.77	-0.3
3,737,065	+		Echvi_3126	0.82	+0.6
3,737,211	-				-1.6
3,737,218	-				-0.3
3,737,245	+				+1.3
3,737,246	-				-0.2
3,737,246	-				-0.6
3,737,249	+				-0.7
3,737,250	-				-1.6
3,737,272	-				-0.7
3,737,334	-				-0.4
3,737,401	-				-2.2
3,737,401	-				-0.6
3,737,423	+				-0.0
3,737,508	+				+0.1
3,737,508	+				-0.5
3,737,551	+				+0.6
3,737,552	-				+0.6
3,737,552	-				-0.4
3,737,552	-				-0.5
3,737,560	-				+0.4
3,737,560	-				-1.0
3,737,595	-				-0.0
3,737,657	+				+0.2
3,737,682	-		Echvi_3127	0.10	+0.1
3,737,682	-		Echvi_3127	0.10	+0.6
3,737,682	-		Echvi_3127	0.10	+1.2
3,737,682	-		Echvi_3127	0.10	-0.0
3,737,682	-		Echvi_3127	0.10	+0.2
3,737,709	+		Echvi_3127	0.11	-2.7
3,737,714	+		Echvi_3127	0.11	-0.9
3,737,714	+		Echvi_3127	0.11	-0.5
3,737,714	+		Echvi_3127	0.11	-0.2
3,737,714	+		Echvi_3127	0.11	-0.3
3,737,714	+		Echvi_3127	0.11	+0.6
3,737,714	+		Echvi_3127	0.11	-1.4
3,737,714	+		Echvi_3127	0.11	-1.9
3,737,714	+		Echvi_3127	0.11	+0.9
3,737,715	-		Echvi_3127	0.11	+0.0
3,737,715	-		Echvi_3127	0.11	-0.6
3,737,715	-		Echvi_3127	0.11	-1.6
3,737,715	-		Echvi_3127	0.11	+1.0
3,737,715	-		Echvi_3127	0.11	+0.6
3,737,715	-		Echvi_3127	0.11	+0.5
3,737,720	-		Echvi_3127	0.12	-0.3
3,737,723	+		Echvi_3127	0.12	-0.3
3,737,723	+		Echvi_3127	0.12	+0.4
3,737,723	+		Echvi_3127	0.12	-0.7
3,737,723	+		Echvi_3127	0.12	-1.1
3,737,723	+		Echvi_3127	0.12	+0.5
3,737,723	+		Echvi_3127	0.12	+0.1
3,737,724	-		Echvi_3127	0.12	+0.7
3,737,724	-		Echvi_3127	0.12	+0.7
3,737,727	-		Echvi_3127	0.12	-0.4
3,737,759	+		Echvi_3127	0.13	+0.1
3,737,760	-				-0.0
3,737,771	+		Echvi_3127	0.13	+0.8
3,737,772	-		Echvi_3127	0.13	-3.1
3,737,826	+		Echvi_3127	0.15	+0.7
3,737,826	+		Echvi_3127	0.15	+0.6
3,737,854	+		Echvi_3127	0.16	-1.4
3,737,872	+		Echvi_3127	0.16	+0.7
3,737,872	+		Echvi_3127	0.16	-0.2
3,737,872	+		Echvi_3127	0.16	+0.3
3,737,872	+		Echvi_3127	0.16	-1.1
3,737,872	+		Echvi_3127	0.16	+1.4
3,737,872	+		Echvi_3127	0.16	-0.7
3,737,873	-		Echvi_3127	0.16	+0.6
3,737,873	-		Echvi_3127	0.16	+0.0
3,737,873	-		Echvi_3127	0.16	+0.4
3,737,873	-		Echvi_3127	0.16	+0.6
3,737,913	-		Echvi_3127	0.18	+0.6
3,737,923	+		Echvi_3127	0.18	+0.8
3,737,924	-		Echvi_3127	0.18	-0.6
3,737,942	+		Echvi_3127	0.18	-0.4
3,737,942	+		Echvi_3127	0.18	-0.2
3,737,943	-		Echvi_3127	0.19	+0.2
3,738,141	-		Echvi_3127	0.25	+1.2
3,738,144	-		Echvi_3127	0.25	+0.4
3,738,144	-		Echvi_3127	0.25	-0.6
3,738,145	+		Echvi_3127	0.25	+0.0
3,738,145	+		Echvi_3127	0.25	-1.9
3,738,145	+		Echvi_3127	0.25	-1.1
3,738,146	-		Echvi_3127	0.25	-0.0
3,738,158	+		Echvi_3127	0.25	+0.7