Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3071

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
3,664,236	+		Echvi_3068	0.11	-1.4
3,664,383	+		Echvi_3068	0.73	-2.0
3,664,441	+				-1.2
3,664,442	-				+0.7
3,664,445	+				+0.3
3,664,446	-				-0.7
3,664,450	+				-0.5
3,664,465	+		Echvi_3069	0.11	-0.3
3,664,466	-		Echvi_3069	0.11	+0.3
3,664,468	+		Echvi_3069	0.11	-0.7
3,664,469	-		Echvi_3069	0.11	+0.7
3,664,525	+		Echvi_3069	0.21	+0.6
3,664,526	-		Echvi_3069	0.21	-1.2
3,664,530	+		Echvi_3069	0.22	-1.0
3,664,531	-		Echvi_3069	0.22	-1.1
3,664,546	+		Echvi_3069	0.24	-0.3
3,664,547	-		Echvi_3069	0.24	+0.4
3,664,602	-		Echvi_3069	0.34	+1.1
3,664,602	-		Echvi_3069	0.34	-0.2
3,664,604	+				-0.0
3,664,605	-		Echvi_3069	0.34	-0.6
3,664,605	-		Echvi_3069	0.34	-0.0
3,664,623	+		Echvi_3069	0.37	-0.0
3,664,624	-		Echvi_3069	0.37	+1.0
3,664,624	-		Echvi_3069	0.37	-0.7
3,664,625	+		Echvi_3069	0.38	-0.4
3,664,625	+		Echvi_3069	0.38	+0.1
3,664,626	-		Echvi_3069	0.38	-0.3
3,664,626	-		Echvi_3069	0.38	-0.3
3,664,629	-		Echvi_3069	0.38	+0.2
3,664,633	+		Echvi_3069	0.39	-1.2
3,664,633	+		Echvi_3069	0.39	+1.3
3,664,681	-		Echvi_3069	0.47	+0.2
3,664,681	-		Echvi_3069	0.47	-0.4
3,664,699	+		Echvi_3069	0.50	+0.5
3,664,733	+		Echvi_3069	0.56	-1.3
3,664,747	+		Echvi_3069	0.58	-0.4
3,664,792	+		Echvi_3069	0.65	+0.1
3,664,793	-		Echvi_3069	0.66	+2.3
3,664,793	-		Echvi_3069	0.66	+1.1
3,664,793	-		Echvi_3069	0.66	-0.7
3,664,798	-		Echvi_3069	0.66	-0.5
3,664,842	-		Echvi_3069	0.74	+0.2
3,664,871	-		Echvi_3069	0.79	+0.9
3,664,927	-		Echvi_3069	0.88	-0.7
3,664,927	-		Echvi_3069	0.88	-0.3
3,664,927	-		Echvi_3069	0.88	-0.7
3,664,932	+		Echvi_3069	0.89	-0.2
3,664,955	+				-0.6
3,664,955	+				-0.2
3,664,955	+				-0.7
3,664,955	+				-1.7
3,664,955	+				-0.6
3,664,956	-				+1.3
3,664,956	-				+0.6
3,664,956	-				+1.4
3,664,956	-				-1.0
3,664,956	-				+1.1
3,664,956	-				-0.4
3,664,957	+				-0.2
3,664,958	-				-1.1
3,664,958	-				+0.8
3,664,974	-				-0.9
3,664,974	-				-0.3
3,664,991	-				+0.0
3,665,031	+				-0.2
3,665,031	+				-0.2
3,665,032	-				-0.6
3,665,133	+		Echvi_3070	0.74	-1.6
3,665,133	+		Echvi_3070	0.74	+0.3
3,665,133	+		Echvi_3070	0.74	-1.6
3,665,134	-		Echvi_3070	0.75	-0.0
3,665,134	-		Echvi_3070	0.75	-1.0
3,665,141	-				+0.4
3,665,296	+		Echvi_3071	0.11	+0.6
3,665,297	-		Echvi_3071	0.11	+1.6
3,665,344	+		Echvi_3071	0.14	-0.1
3,665,354	+		Echvi_3071	0.15	+2.3
3,665,422	+		Echvi_3071	0.20	-1.3
3,665,422	+		Echvi_3071	0.20	+0.1
3,665,422	+		Echvi_3071	0.20	-0.3
3,665,423	-		Echvi_3071	0.20	-1.1
3,665,423	-		Echvi_3071	0.20	-2.5
3,665,430	+		Echvi_3071	0.21	-0.6
3,665,448	+		Echvi_3071	0.22	+0.7
3,665,631	+		Echvi_3071	0.35	+0.6
3,665,632	-		Echvi_3071	0.35	+1.0
3,665,666	-		Echvi_3071	0.37	+0.6
3,665,671	-		Echvi_3071	0.38	+1.6
3,665,726	-		Echvi_3071	0.41	-0.6
3,665,841	+		Echvi_3071	0.50	+0.1
3,665,922	+		Echvi_3071	0.55	+0.2
3,665,939	+		Echvi_3071	0.56	+1.2
3,665,939	+		Echvi_3071	0.56	+1.0
3,665,939	+		Echvi_3071	0.56	+0.2
3,665,996	-		Echvi_3071	0.61	+0.1
3,666,016	-		Echvi_3071	0.62	+0.2
3,666,101	+		Echvi_3071	0.68	-0.8
3,666,179	+		Echvi_3071	0.73	+0.5
3,666,180	-		Echvi_3071	0.74	-2.5
3,666,180	-		Echvi_3071	0.74	-0.6
3,666,219	+		Echvi_3071	0.76	-0.8
3,666,219	+		Echvi_3071	0.76	+0.3
3,666,241	+		Echvi_3071	0.78	-0.0
3,666,251	-		Echvi_3071	0.79	-0.2
3,666,259	+		Echvi_3071	0.79	-0.4
3,666,339	+		Echvi_3071	0.85	-0.6
3,666,339	+		Echvi_3071	0.85	-0.1
3,666,346	+		Echvi_3071	0.85	+0.2
3,666,347	-		Echvi_3071	0.85	-0.7
3,666,542	+				+0.4
3,666,543	-				-1.1
3,666,543	-				+0.9
3,666,572	+				+0.5
3,666,573	-				+0.2
3,666,606	-				-0.8
3,666,710	+				-1.3
3,666,711	-				-2.3
3,666,711	-				-0.0
3,666,720	+		Echvi_3072	0.10	+0.0
3,666,783	+		Echvi_3072	0.15	-0.7
3,666,907	+		Echvi_3072	0.23	+0.3
3,666,907	+		Echvi_3072	0.23	+0.1
3,666,933	+		Echvi_3072	0.25	-0.0
3,666,936	-		Echvi_3072	0.25	+1.2
3,667,010	+		Echvi_3072	0.30	+0.6
3,667,077	+		Echvi_3072	0.35	+2.2
3,667,077	+		Echvi_3072	0.35	+1.0
3,667,077	+		Echvi_3072	0.35	-0.9
3,667,077	+		Echvi_3072	0.35	-0.2
3,667,077	+		Echvi_3072	0.35	+0.1
3,667,078	-		Echvi_3072	0.35	-1.4
3,667,121	+		Echvi_3072	0.38	+1.6
3,667,121	+		Echvi_3072	0.38	-0.8
3,667,122	-		Echvi_3072	0.38	+1.1
3,667,156	-		Echvi_3072	0.40	-0.8
3,667,247	+		Echvi_3072	0.47	-0.7
3,667,247	+		Echvi_3072	0.47	+0.0
3,667,248	-		Echvi_3072	0.47	-0.6
3,667,248	-		Echvi_3072	0.47	+0.8
3,667,249	+		Echvi_3072	0.47	+0.4
3,667,249	+		Echvi_3072	0.47	+2.0
3,667,250	-		Echvi_3072	0.47	-0.9
3,667,303	+		Echvi_3072	0.51	+1.4
3,667,304	-		Echvi_3072	0.51	-1.2
3,667,383	-		Echvi_3072	0.56	-0.3
3,667,392	-		Echvi_3072	0.57	-0.0
3,667,415	+		Echvi_3072	0.58	+1.4
3,667,416	-		Echvi_3072	0.58	-0.6
3,667,431	+		Echvi_3072	0.59	-0.6
3,667,444	+		Echvi_3072	0.60	-1.0
3,667,444	+		Echvi_3072	0.60	-0.1
3,667,476	+		Echvi_3072	0.63	-0.5
3,667,479	+		Echvi_3072	0.63	-0.4
3,667,479	+		Echvi_3072	0.63	+1.2
3,667,479	+		Echvi_3072	0.63	+1.6
3,667,479	+		Echvi_3072	0.63	-0.0
3,667,480	-		Echvi_3072	0.63	-0.2
3,667,480	-		Echvi_3072	0.63	-0.1
3,667,480	-		Echvi_3072	0.63	-0.4
3,667,480	-		Echvi_3072	0.63	-0.4
3,667,480	-		Echvi_3072	0.63	+0.4