Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2736

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
3,255,004	+		Echvi_2733	0.59	-0.7
3,255,041	-		Echvi_2733	0.74	+0.6
3,255,041	-		Echvi_2733	0.74	+0.2
3,255,049	-		Echvi_2733	0.78	+0.2
3,255,054	+		Echvi_2733	0.80	+1.6
3,255,055	-		Echvi_2733	0.80	+1.6
3,255,069	+		Echvi_2733	0.86	+0.8
3,255,069	+		Echvi_2733	0.86	-0.1
3,255,070	-		Echvi_2733	0.86	-0.2
3,255,078	+				+0.5
3,255,078	+				+0.6
3,255,089	+				+1.0
3,255,090	-				+0.1
3,255,111	+				+0.5
3,255,130	-				+0.5
3,255,156	-		Echvi_2734	0.13	-0.2
3,255,189	+		Echvi_2734	0.24	+0.3
3,255,249	+		Echvi_2734	0.43	-1.1
3,255,309	+		Echvi_2734	0.63	+0.2
3,255,309	+		Echvi_2734	0.63	-0.2
3,255,320	+		Echvi_2734	0.66	+0.4
3,255,330	+		Echvi_2734	0.70	-0.3
3,255,331	-		Echvi_2734	0.70	+0.2
3,255,339	-		Echvi_2734	0.73	-2.2
3,255,344	+		Echvi_2734	0.74	+0.1
3,255,389	+		Echvi_2734	0.89	-0.2
3,255,389	+		Echvi_2734	0.89	-0.4
3,255,439	+				-0.9
3,255,440	-				+0.5
3,255,442	+				+0.3
3,255,443	-				+1.4
3,255,538	+		Echvi_2735	0.38	+1.6
3,255,539	-		Echvi_2735	0.38	+1.6
3,255,539	-		Echvi_2735	0.38	+0.7
3,255,558	+		Echvi_2735	0.45	-1.9
3,255,558	+		Echvi_2735	0.45	-0.4
3,255,616	+		Echvi_2735	0.63	+2.1
3,255,616	+		Echvi_2735	0.63	+0.1
3,255,616	+		Echvi_2735	0.63	+0.6
3,255,617	-		Echvi_2735	0.63	+0.9
3,255,617	-		Echvi_2735	0.63	-1.2
3,255,617	-		Echvi_2735	0.63	+0.1
3,255,617	-		Echvi_2735	0.63	-0.7
3,255,706	+				-0.7
3,255,707	-				+0.4
3,255,707	-				+0.6
3,255,709	+				-2.6
3,255,762	+				-0.1
3,255,765	+				+0.2
3,255,766	-				+0.5
3,255,772	+				+0.3
3,255,773	-				-0.9
3,255,806	+				-0.5
3,255,807	-				-0.6
3,255,807	-				+0.5
3,255,807	-				-1.7
3,255,807	-				-0.4
3,255,807	-				-0.9
3,255,852	+				+0.0
3,255,884	-				-0.0
3,255,891	-				-0.0
3,255,912	-				-0.0
3,255,912	-				+0.7
3,255,912	-				-1.8
3,255,912	-				+0.2
3,255,912	-				+1.0
3,255,915	-				+1.6
3,255,959	-				+0.8
3,255,959	-				-0.2
3,255,959	-				+0.2
3,255,959	-				-0.9
3,255,959	-				-0.1
3,255,979	-				+0.3
3,255,981	+				-0.4
3,255,981	+				+0.2
3,255,998	-				+0.8
3,256,019	-				+1.8
3,256,168	-		Echvi_2736	0.20	+0.9
3,256,178	+		Echvi_2736	0.21	+0.5
3,256,178	+		Echvi_2736	0.21	+1.0
3,256,197	-		Echvi_2736	0.23	-0.4
3,256,247	+		Echvi_2736	0.29	+0.8
3,256,250	+		Echvi_2736	0.29	+0.4
3,256,250	+		Echvi_2736	0.29	-0.1
3,256,251	-		Echvi_2736	0.29	-0.2
3,256,273	-		Echvi_2736	0.31	+0.5
3,256,273	-		Echvi_2736	0.31	-0.0
3,256,277	+		Echvi_2736	0.32	-0.3
3,256,284	+		Echvi_2736	0.32	+0.6
3,256,320	+		Echvi_2736	0.36	+0.8
3,256,321	-		Echvi_2736	0.36	+1.6
3,256,321	-		Echvi_2736	0.36	+0.5
3,256,321	-		Echvi_2736	0.36	-0.2
3,256,321	-		Echvi_2736	0.36	-0.0
3,256,351	-		Echvi_2736	0.40	-0.6
3,256,355	+		Echvi_2736	0.40	+0.7
3,256,358	+		Echvi_2736	0.40	+0.5
3,256,359	-		Echvi_2736	0.40	-0.8
3,256,363	-		Echvi_2736	0.41	+1.1
3,256,409	+		Echvi_2736	0.46	+0.1
3,256,409	+		Echvi_2736	0.46	-1.0
3,256,446	+		Echvi_2736	0.50	+0.9
3,256,447	-		Echvi_2736	0.50	+1.6
3,256,449	+		Echvi_2736	0.50	+0.4
3,256,450	-		Echvi_2736	0.50	+2.2
3,256,454	+		Echvi_2736	0.50	+0.6
3,256,593	-		Echvi_2736	0.65	+2.0
3,256,654	-		Echvi_2736	0.71	+0.5
3,256,665	-		Echvi_2736	0.73	+0.2
3,256,693	-		Echvi_2736	0.75	+0.6
3,256,693	-		Echvi_2736	0.75	+0.2
3,256,806	+		Echvi_2736	0.87	-0.5
3,256,806	+		Echvi_2736	0.87	-0.6
3,256,807	-		Echvi_2736	0.87	+2.0
3,256,880	-				-1.1
3,256,883	+				+0.1
3,256,884	-				-0.0
3,256,895	+				+0.4
3,256,895	+				-1.0
3,256,899	+				+0.6
3,256,901	+				-0.2
3,256,902	-				-2.5
3,256,906	-				+0.7
3,256,906	-				+1.1
3,256,908	+				+0.5
3,256,908	+				+1.0
3,256,909	-				+0.1
3,256,909	-				+0.6
3,256,909	-				+0.7
3,256,909	-				+1.8
3,256,909	-				+1.0
3,256,979	+				+0.5
3,256,979	+				-0.3
3,256,979	+				-0.1
3,256,980	-				+0.7
3,257,007	+				+0.6
3,257,008	-				-0.5
3,257,008	-				-0.7
3,257,009	+				+0.5
3,257,009	+				+0.5
3,257,009	+				+0.1
3,257,010	-				-2.4
3,257,015	+				-0.3
3,257,018	+				-1.9
3,257,018	+				-0.5
3,257,031	+		Echvi_2737	0.11	-0.6
3,257,064	+		Echvi_2737	0.15	+1.6
3,257,065	-		Echvi_2737	0.16	+0.2
3,257,067	+		Echvi_2737	0.16	+0.1
3,257,067	+		Echvi_2737	0.16	+1.0
3,257,070	+		Echvi_2737	0.16	-0.0
3,257,070	+		Echvi_2737	0.16	+0.6
3,257,071	-		Echvi_2737	0.16	-0.6
3,257,184	+		Echvi_2737	0.32	-1.0
3,257,209	+		Echvi_2737	0.35	-0.5
3,257,210	-		Echvi_2737	0.35	+0.1
3,257,210	-		Echvi_2737	0.35	-0.4
3,257,284	-		Echvi_2737	0.45	+0.4
3,257,286	+		Echvi_2737	0.46	-0.2
3,257,341	+		Echvi_2737	0.53	+0.9
3,257,342	-		Echvi_2737	0.53	+1.1
3,257,342	-		Echvi_2737	0.53	+0.1
3,257,347	-		Echvi_2737	0.54	-0.1
3,257,410	-		Echvi_2737	0.62	+0.3
3,257,416	+		Echvi_2737	0.63	-0.9
3,257,418	+		Echvi_2737	0.64	+0.7
3,257,418	+		Echvi_2737	0.64	-1.1
3,257,418	+		Echvi_2737	0.64	-0.3
3,257,418	+		Echvi_2737	0.64	+0.2
3,257,419	-		Echvi_2737	0.64	-0.4
3,257,419	-		Echvi_2737	0.64	-0.9
3,257,419	-		Echvi_2737	0.64	+2.6
3,257,462	+		Echvi_2737	0.70	+0.3
3,257,463	-		Echvi_2737	0.70	-0.0
3,257,466	+		Echvi_2737	0.70	+1.2
3,257,467	-		Echvi_2737	0.70	+0.1
3,257,467	-		Echvi_2737	0.70	+0.9
3,257,526	+		Echvi_2737	0.78	-0.1
3,257,551	+		Echvi_2737	0.82	-0.4
3,257,556	+		Echvi_2737	0.82	-0.5
3,257,566	-		Echvi_2737	0.84	-0.8
3,257,566	-		Echvi_2737	0.84	-0.9
3,257,593	-		Echvi_2737	0.87	+1.4
3,257,593	-		Echvi_2737	0.87	-0.6
3,257,618	-				-0.4
3,257,651	-				+0.5
3,257,653	+				-0.8
3,257,656	+				-0.8
3,257,656	+				+0.8
3,257,656	+				+0.2
3,257,656	+				-1.6
3,257,657	-				+3.2
3,257,657	-				-0.3
3,257,657	-				+0.3
3,257,657	-				-0.6
3,257,657	-				-1.8
3,257,691	-				-0.5
3,257,710	+				+0.4
3,257,763	+				-1.3
3,257,821	-		Echvi_2738	0.15	-1.0
3,257,892	-		Echvi_2738	0.22	-1.5
3,257,895	-		Echvi_2738	0.22	+0.4
3,257,925	+		Echvi_2738	0.25	+0.1
3,257,925	+		Echvi_2738	0.25	-0.0