Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1068

Experiment: D-Trehalose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose (C)
1,227,168	+		Echvi_1067	0.19	-0.6
1,227,169	-		Echvi_1067	0.19	+0.7
1,227,279	-		Echvi_1067	0.36	-1.0
1,227,279	-		Echvi_1067	0.36	+0.0
1,227,319	+		Echvi_1067	0.43	+0.0
1,227,320	+		Echvi_1067	0.43	+0.3
1,227,320	-		Echvi_1067	0.43	-0.3
1,227,340	+		Echvi_1067	0.46	-0.4
1,227,340	+		Echvi_1067	0.46	-0.3
1,227,340	+		Echvi_1067	0.46	+0.7
1,227,341	-		Echvi_1067	0.46	-1.4
1,227,341	-		Echvi_1067	0.46	+0.5
1,227,341	-		Echvi_1067	0.46	-0.4
1,227,373	+		Echvi_1067	0.51	-1.5
1,227,373	+		Echvi_1067	0.51	-0.5
1,227,373	+		Echvi_1067	0.51	-0.5
1,227,374	-		Echvi_1067	0.52	+0.5
1,227,374	-		Echvi_1067	0.52	-0.3
1,227,375	+		Echvi_1067	0.52	-1.9
1,227,376	-		Echvi_1067	0.52	-0.1
1,227,439	+		Echvi_1067	0.62	-0.7
1,227,440	-		Echvi_1067	0.62	-0.3
1,227,440	-		Echvi_1067	0.62	-0.2
1,227,440	-		Echvi_1067	0.62	+0.5
1,227,470	-		Echvi_1067	0.67	-0.1
1,227,470	-		Echvi_1067	0.67	+1.0
1,227,470	-		Echvi_1067	0.67	+0.2
1,227,493	-		Echvi_1067	0.71	-0.1
1,227,525	+		Echvi_1067	0.76	+1.5
1,227,525	+		Echvi_1067	0.76	+2.6
1,227,525	+		Echvi_1067	0.76	+0.3
1,227,526	-		Echvi_1067	0.76	-0.1
1,227,526	-		Echvi_1067	0.76	-0.5
1,227,526	-		Echvi_1067	0.76	-1.5
1,227,544	+		Echvi_1067	0.79	-0.5
1,227,544	+		Echvi_1067	0.79	-0.4
1,227,575	+		Echvi_1067	0.84	-1.2
1,227,576	-		Echvi_1067	0.84	+1.6
1,227,591	+		Echvi_1067	0.86	-1.1
1,227,626	+				-0.5
1,227,651	-				-0.5
1,227,651	-				+1.6
1,227,698	-				+0.6
1,227,701	-				-0.6
1,227,760	+				-0.2
1,227,780	+				-0.5
1,227,780	+				+1.5
1,227,780	+				-0.8
1,227,799	+				-0.1
1,227,800	-				+2.0
1,227,827	+				+0.6
1,227,836	+				+0.0
1,227,837	-				+0.4
1,227,845	-				+0.3
1,227,865	+				+0.0
1,227,865	+				+0.9
1,227,866	-				+0.5
1,227,866	-				-0.5
1,227,867	+				-1.5
1,227,867	+				+0.2
1,227,868	-				+0.1
1,227,875	+				+0.6
1,227,878	+				-0.1
1,227,878	+				+0.9
1,227,915	-				+0.1
1,227,948	+				+0.5
1,227,949	-				+1.1
1,227,949	-				-0.2
1,227,949	-				-0.4
1,227,955	+				+0.1
1,227,955	+				+1.3
1,227,956	-				-1.1
1,227,959	+				+0.2
1,227,959	+				-0.9
1,227,969	+				+0.2
1,227,995	-				-0.1
1,228,030	-				+0.4
1,228,042	+				+0.5
1,228,050	+				+0.0
1,228,057	-				-0.2
1,228,061	+				-2.1
1,228,062	-				-0.3
1,228,062	-				-0.7
1,228,071	+				-1.5
1,228,071	+				+0.5
1,228,071	+				+1.6
1,228,071	+				+0.0
1,228,071	+				+0.7
1,228,071	+				+1.0
1,228,071	+				-0.5
1,228,072	-				-1.1
1,228,072	-				-1.0
1,228,072	-				-0.8
1,228,072	-				-0.6
1,228,075	-				+0.5
1,228,157	+		Echvi_1068	0.15	+0.6
1,228,158	-		Echvi_1068	0.15	+0.0
1,228,158	-		Echvi_1068	0.15	+1.3
1,228,189	+		Echvi_1068	0.22	+1.1
1,228,189	+		Echvi_1068	0.22	+0.2
1,228,196	-		Echvi_1068	0.24	+0.3
1,228,243	+		Echvi_1068	0.35	-0.4
1,228,244	-		Echvi_1068	0.35	+0.5
1,228,246	+		Echvi_1068	0.36	+1.3
1,228,246	+		Echvi_1068	0.36	+0.8
1,228,246	+		Echvi_1068	0.36	+0.1
1,228,247	-		Echvi_1068	0.36	+1.4
1,228,247	-		Echvi_1068	0.36	+0.3
1,228,247	-		Echvi_1068	0.36	-0.3
1,228,247	-		Echvi_1068	0.36	-1.3
1,228,247	-		Echvi_1068	0.36	+0.6
1,228,252	-		Echvi_1068	0.37	-1.0
1,228,348	+		Echvi_1068	0.60	+0.5
1,228,349	-		Echvi_1068	0.60	+0.6
1,228,427	-		Echvi_1068	0.78	+0.8
1,228,468	+		Echvi_1068	0.88	+2.0
1,228,469	-		Echvi_1068	0.88	-1.2
1,228,469	-		Echvi_1068	0.88	-0.6
1,228,518	-				+0.3
1,228,554	+				-0.1
1,228,554	+				+2.2
1,228,555	-				+1.4
1,228,560	-				-1.3
1,228,572	+				+0.7
1,228,572	+				+0.1
1,228,572	+				+0.2
1,228,573	-				+0.7
1,228,573	-				+0.6
1,228,575	-				+1.3
1,228,575	-				-0.1
1,228,575	-				-0.5
1,228,575	-				-0.2
1,228,590	+				-2.6
1,228,647	+				-1.2
1,228,648	-				+0.0
1,228,648	-				+2.0
1,228,696	+				+0.9
1,228,708	+				-1.3
1,228,709	-				+2.0
1,228,723	+				+0.2
1,228,723	+				-1.1
1,228,762	+				-0.0
1,228,896	+				-0.4
1,228,896	+				+0.3
1,228,896	+				+0.3
1,228,897	-				-0.8
1,228,897	-				-1.1
1,228,897	-				+1.7
1,228,897	-				-0.1
1,228,897	-				+0.8
1,228,897	-				+0.0
1,228,897	-				-0.7
1,228,990	+		Echvi_1069	0.14	+1.4
1,228,991	-		Echvi_1069	0.14	+1.2
1,229,060	+		Echvi_1069	0.16	+0.8
1,229,069	+		Echvi_1069	0.17	+0.5
1,229,070	-		Echvi_1069	0.17	+0.9
1,229,232	+		Echvi_1069	0.24	+0.4
1,229,233	-		Echvi_1069	0.24	+0.1
1,229,233	-		Echvi_1069	0.24	-0.1
1,229,233	-		Echvi_1069	0.24	+0.7
1,229,252	+		Echvi_1069	0.24	+1.0
1,229,270	+		Echvi_1069	0.25	+1.6
1,229,276	+		Echvi_1069	0.25	+1.6
1,229,288	+		Echvi_1069	0.26	-0.3
1,229,288	+		Echvi_1069	0.26	+0.7
1,229,310	+		Echvi_1069	0.27	+0.7
1,229,310	+		Echvi_1069	0.27	+0.0
1,229,311	-		Echvi_1069	0.27	-0.5
1,229,311	-		Echvi_1069	0.27	-0.0
1,229,333	+		Echvi_1069	0.28	+1.3
1,229,333	+		Echvi_1069	0.28	+1.3
1,229,334	-		Echvi_1069	0.28	+0.5
1,229,334	-		Echvi_1069	0.28	+1.0
1,229,334	-		Echvi_1069	0.28	-0.1
1,229,372	+		Echvi_1069	0.29	+1.9
1,229,412	-		Echvi_1069	0.31	+0.8
1,229,434	+		Echvi_1069	0.32	-0.9