Experiment: D-Trehalose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0467 and Echvi_0468 are separated by 478 nucleotides Echvi_0468 and Echvi_0469 are separated by 117 nucleotides
Echvi_0467: Echvi_0467 - hypothetical protein, at 512,041 to 512,457
_0467
Echvi_0468: Echvi_0468 - SusD family., at 512,936 to 514,681
_0468
Echvi_0469: Echvi_0469 - TonB-linked outer membrane protein, SusC/RagA family, at 514,799 to 517,885
_0469
Position (kb) 512
513
514
515 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 511.940 kb on + strand at 511.940 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.987 kb on + strand at 511.991 kb on + strand at 511.991 kb on + strand at 511.991 kb on + strand at 512.011 kb on + strand at 512.038 kb on + strand at 512.070 kb on + strand at 512.079 kb on + strand at 512.089 kb on - strand, within Echvi_0467 at 512.124 kb on + strand, within Echvi_0467 at 512.179 kb on - strand, within Echvi_0467 at 512.179 kb on - strand, within Echvi_0467 at 512.182 kb on - strand, within Echvi_0467 at 512.182 kb on - strand, within Echvi_0467 at 512.249 kb on + strand, within Echvi_0467 at 512.256 kb on + strand, within Echvi_0467 at 512.257 kb on - strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.262 kb on + strand, within Echvi_0467 at 512.262 kb on + strand, within Echvi_0467 at 512.278 kb on + strand, within Echvi_0467 at 512.278 kb on + strand, within Echvi_0467 at 512.280 kb on + strand, within Echvi_0467 at 512.280 kb on + strand, within Echvi_0467 at 512.280 kb on + strand, within Echvi_0467 at 512.281 kb on - strand, within Echvi_0467 at 512.281 kb on - strand, within Echvi_0467 at 512.281 kb on - strand, within Echvi_0467 at 512.345 kb on - strand, within Echvi_0467 at 512.345 kb on - strand, within Echvi_0467 at 512.349 kb on - strand, within Echvi_0467 at 512.378 kb on + strand, within Echvi_0467 at 512.382 kb on + strand, within Echvi_0467 at 512.459 kb on + strand at 512.460 kb on - strand at 512.490 kb on - strand at 512.502 kb on + strand at 512.502 kb on + strand at 512.503 kb on - strand at 512.528 kb on + strand at 512.679 kb on + strand at 512.694 kb on + strand at 512.708 kb on - strand at 512.727 kb on + strand at 512.727 kb on + strand at 512.728 kb on - strand at 512.738 kb on + strand at 512.738 kb on + strand at 512.742 kb on + strand at 512.742 kb on + strand at 512.742 kb on + strand at 512.743 kb on - strand at 512.751 kb on + strand at 512.752 kb on - strand at 512.754 kb on - strand at 512.772 kb on - strand at 512.777 kb on - strand at 512.780 kb on + strand at 512.780 kb on + strand at 512.781 kb on - strand at 512.911 kb on - strand at 513.023 kb on + strand at 513.024 kb on - strand at 513.060 kb on + strand at 513.061 kb on - strand at 513.061 kb on - strand at 513.082 kb on - strand at 513.206 kb on - strand, within Echvi_0468 at 513.270 kb on + strand, within Echvi_0468 at 513.307 kb on + strand, within Echvi_0468 at 513.312 kb on + strand, within Echvi_0468 at 513.312 kb on + strand, within Echvi_0468 at 513.312 kb on + strand, within Echvi_0468 at 513.312 kb on + strand, within Echvi_0468 at 513.313 kb on - strand, within Echvi_0468 at 513.313 kb on - strand, within Echvi_0468 at 513.316 kb on - strand, within Echvi_0468 at 513.412 kb on + strand, within Echvi_0468 at 513.412 kb on + strand, within Echvi_0468 at 513.423 kb on + strand, within Echvi_0468 at 513.451 kb on + strand, within Echvi_0468 at 513.465 kb on + strand, within Echvi_0468 at 513.466 kb on - strand, within Echvi_0468 at 513.499 kb on + strand, within Echvi_0468 at 513.499 kb on + strand, within Echvi_0468 at 513.499 kb on + strand, within Echvi_0468 at 513.499 kb on + strand, within Echvi_0468 at 513.500 kb on - strand, within Echvi_0468 at 513.500 kb on - strand, within Echvi_0468 at 513.503 kb on - strand, within Echvi_0468 at 513.585 kb on + strand, within Echvi_0468 at 513.605 kb on - strand, within Echvi_0468 at 513.652 kb on + strand, within Echvi_0468 at 513.693 kb on - strand, within Echvi_0468 at 513.724 kb on - strand, within Echvi_0468 at 513.910 kb on - strand, within Echvi_0468 at 513.928 kb on - strand, within Echvi_0468 at 513.941 kb on - strand, within Echvi_0468 at 513.944 kb on - strand, within Echvi_0468 at 513.944 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.963 kb on - strand, within Echvi_0468 at 513.997 kb on + strand, within Echvi_0468 at 513.997 kb on + strand, within Echvi_0468 at 514.002 kb on + strand, within Echvi_0468 at 514.002 kb on + strand, within Echvi_0468 at 514.003 kb on - strand, within Echvi_0468 at 514.016 kb on + strand, within Echvi_0468 at 514.062 kb on + strand, within Echvi_0468 at 514.062 kb on + strand, within Echvi_0468 at 514.063 kb on - strand, within Echvi_0468 at 514.066 kb on + strand, within Echvi_0468 at 514.066 kb on + strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.075 kb on + strand, within Echvi_0468 at 514.096 kb on + strand, within Echvi_0468 at 514.134 kb on + strand, within Echvi_0468 at 514.134 kb on + strand, within Echvi_0468 at 514.234 kb on - strand, within Echvi_0468 at 514.360 kb on + strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.501 kb on + strand, within Echvi_0468 at 514.501 kb on + strand, within Echvi_0468 at 514.502 kb on - strand, within Echvi_0468 at 514.511 kb on + strand at 514.511 kb on + strand at 514.511 kb on + strand at 514.511 kb on + strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.515 kb on + strand at 514.616 kb on - strand at 514.621 kb on + strand at 514.672 kb on + strand at 514.673 kb on - strand at 514.814 kb on - strand at 514.840 kb on + strand at 514.924 kb on - strand at 515.016 kb on + strand at 515.026 kb on + strand at 515.047 kb on - strand at 515.080 kb on + strand at 515.080 kb on + strand at 515.081 kb on - strand at 515.176 kb on + strand, within Echvi_0469 at 515.176 kb on + strand, within Echvi_0469 at 515.176 kb on + strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.187 kb on + strand, within Echvi_0469 at 515.188 kb on - strand, within Echvi_0469 at 515.188 kb on - strand, within Echvi_0469 at 515.194 kb on + strand, within Echvi_0469 at 515.241 kb on + strand, within Echvi_0469 at 515.245 kb on + strand, within Echvi_0469 at 515.254 kb on + strand, within Echvi_0469 at 515.265 kb on + strand, within Echvi_0469 at 515.265 kb on + strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.369 kb on - strand, within Echvi_0469 at 515.369 kb on - strand, within Echvi_0469 at 515.386 kb on + strand, within Echvi_0469 at 515.388 kb on + strand, within Echvi_0469 at 515.388 kb on + strand, within Echvi_0469 at 515.389 kb on - strand, within Echvi_0469 at 515.389 kb on - strand, within Echvi_0469 at 515.418 kb on + strand, within Echvi_0469 at 515.482 kb on - strand, within Echvi_0469 at 515.496 kb on - strand, within Echvi_0469 at 515.504 kb on - strand, within Echvi_0469 at 515.536 kb on - strand, within Echvi_0469
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose (C) remove 511,940 + +0.2 511,940 + +0.9 511,983 + +0.4 511,983 + +0.3 511,983 + -0.1 511,983 + +0.4 511,983 + -1.8 511,983 + -0.5 511,983 + -1.0 511,984 - -0.1 511,984 - -0.3 511,984 - +0.6 511,984 - -1.8 511,984 - -0.2 511,984 - -1.0 511,987 + -0.0 511,991 + +0.7 511,991 + -0.4 511,991 + +0.2 512,011 + +0.7 512,038 + -0.8 512,070 + +0.9 512,079 + -0.1 512,089 - Echvi_0467 0.12 +1.0 512,124 + Echvi_0467 0.20 +0.8 512,179 - Echvi_0467 0.33 -2.2 512,179 - Echvi_0467 0.33 -0.4 512,182 - Echvi_0467 0.34 +1.2 512,182 - Echvi_0467 0.34 +0.4 512,249 + Echvi_0467 0.50 +0.5 512,256 + Echvi_0467 0.52 -0.5 512,257 - Echvi_0467 0.52 -0.4 512,260 + Echvi_0467 0.53 +0.5 512,260 + Echvi_0467 0.53 -1.3 512,260 + Echvi_0467 0.53 +0.6 512,260 + Echvi_0467 0.53 +0.5 512,260 + Echvi_0467 0.53 -0.0 512,260 + Echvi_0467 0.53 -0.6 512,260 + Echvi_0467 0.53 -0.4 512,261 - Echvi_0467 0.53 +0.2 512,261 - Echvi_0467 0.53 +0.5 512,261 - Echvi_0467 0.53 +0.3 512,261 - Echvi_0467 0.53 +0.5 512,261 - Echvi_0467 0.53 +0.1 512,262 + Echvi_0467 0.53 +0.3 512,262 + Echvi_0467 0.53 -0.4 512,278 + Echvi_0467 0.57 +0.4 512,278 + Echvi_0467 0.57 -0.5 512,280 + Echvi_0467 0.57 +1.0 512,280 + Echvi_0467 0.57 +0.6 512,280 + Echvi_0467 0.57 -0.4 512,281 - Echvi_0467 0.58 -1.1 512,281 - Echvi_0467 0.58 +0.6 512,281 - Echvi_0467 0.58 +0.3 512,345 - Echvi_0467 0.73 +1.0 512,345 - Echvi_0467 0.73 -0.3 512,349 - Echvi_0467 0.74 -0.5 512,378 + Echvi_0467 0.81 -0.7 512,382 + Echvi_0467 0.82 -0.5 512,459 + +1.1 512,460 - -0.7 512,490 - +0.3 512,502 + -0.8 512,502 + +0.5 512,503 - -1.1 512,528 + -0.7 512,679 + -0.6 512,694 + -0.0 512,708 - -0.1 512,727 + -1.7 512,727 + +0.6 512,728 - +0.5 512,738 + +0.6 512,738 + -0.6 512,742 + +0.3 512,742 + -0.9 512,742 + -0.1 512,743 - +0.5 512,751 + +0.0 512,752 - -0.3 512,754 - +0.7 512,772 - +0.9 512,777 - -0.5 512,780 + -0.4 512,780 + +0.5 512,781 - -0.5 512,911 - +0.4 513,023 + +0.6 513,024 - +0.0 513,060 + +0.4 513,061 - -0.1 513,061 - -0.6 513,082 - -0.3 513,206 - Echvi_0468 0.15 +0.9 513,270 + Echvi_0468 0.19 -0.9 513,307 + Echvi_0468 0.21 +0.4 513,312 + Echvi_0468 0.22 -0.1 513,312 + Echvi_0468 0.22 +0.4 513,312 + Echvi_0468 0.22 -1.0 513,312 + Echvi_0468 0.22 +1.3 513,313 - Echvi_0468 0.22 +0.1 513,313 - Echvi_0468 0.22 +0.6 513,316 - Echvi_0468 0.22 -0.3 513,412 + Echvi_0468 0.27 -0.8 513,412 + Echvi_0468 0.27 -0.7 513,423 + Echvi_0468 0.28 -0.0 513,451 + Echvi_0468 0.29 -1.7 513,465 + Echvi_0468 0.30 +0.3 513,466 - Echvi_0468 0.30 -1.0 513,499 + Echvi_0468 0.32 -0.6 513,499 + Echvi_0468 0.32 -0.4 513,499 + Echvi_0468 0.32 +0.9 513,499 + Echvi_0468 0.32 -1.4 513,500 - Echvi_0468 0.32 +0.3 513,500 - Echvi_0468 0.32 -0.1 513,503 - Echvi_0468 0.32 -0.4 513,585 + Echvi_0468 0.37 +0.5 513,605 - Echvi_0468 0.38 -0.2 513,652 + Echvi_0468 0.41 -0.2 513,693 - Echvi_0468 0.43 +0.4 513,724 - Echvi_0468 0.45 -1.6 513,910 - Echvi_0468 0.56 -0.7 513,928 - Echvi_0468 0.57 +0.7 513,941 - Echvi_0468 0.58 -2.6 513,944 - Echvi_0468 0.58 -1.8 513,944 - Echvi_0468 0.58 -1.3 513,953 - Echvi_0468 0.58 -0.3 513,953 - Echvi_0468 0.58 +1.2 513,953 - Echvi_0468 0.58 -1.3 513,963 - Echvi_0468 0.59 +1.2 513,997 + Echvi_0468 0.61 -0.8 513,997 + Echvi_0468 0.61 -1.0 514,002 + Echvi_0468 0.61 +0.4 514,002 + Echvi_0468 0.61 -0.4 514,003 - Echvi_0468 0.61 -0.8 514,016 + Echvi_0468 0.62 -0.6 514,062 + Echvi_0468 0.64 -0.7 514,062 + Echvi_0468 0.64 -0.1 514,063 - Echvi_0468 0.65 -1.1 514,066 + Echvi_0468 0.65 +0.9 514,066 + Echvi_0468 0.65 -0.4 514,067 - Echvi_0468 0.65 -0.5 514,067 - Echvi_0468 0.65 +1.9 514,067 - Echvi_0468 0.65 -1.2 514,075 + Echvi_0468 0.65 +0.1 514,096 + Echvi_0468 0.66 -0.0 514,134 + Echvi_0468 0.69 -1.3 514,134 + Echvi_0468 0.69 +0.0 514,234 - Echvi_0468 0.74 +0.4 514,360 + Echvi_0468 0.82 -0.8 514,361 - Echvi_0468 0.82 -1.8 514,361 - Echvi_0468 0.82 -0.7 514,361 - Echvi_0468 0.82 +0.0 514,361 - Echvi_0468 0.82 +0.3 514,501 + Echvi_0468 0.90 +0.9 514,501 + Echvi_0468 0.90 -1.5 514,502 - Echvi_0468 0.90 -0.1 514,511 + -0.0 514,511 + +0.0 514,511 + -0.9 514,511 + +0.3 514,512 - -0.6 514,512 - -0.6 514,512 - -1.3 514,512 - +1.4 514,515 + +0.1 514,616 - -0.1 514,621 + +2.4 514,672 + -0.0 514,673 - +0.9 514,814 - +0.1 514,840 + -1.0 514,924 - -2.1 515,016 + -0.2 515,026 + -0.1 515,047 - +0.3 515,080 + +0.9 515,080 + -0.6 515,081 - +0.3 515,176 + Echvi_0469 0.12 +1.9 515,176 + Echvi_0469 0.12 +1.3 515,176 + Echvi_0469 0.12 -0.4 515,177 - Echvi_0469 0.12 +0.2 515,177 - Echvi_0469 0.12 +0.5 515,177 - Echvi_0469 0.12 +0.9 515,187 + Echvi_0469 0.13 -0.6 515,188 - Echvi_0469 0.13 +1.3 515,188 - Echvi_0469 0.13 +0.3 515,194 + Echvi_0469 0.13 +0.2 515,241 + Echvi_0469 0.14 +4.0 515,245 + Echvi_0469 0.14 +0.9 515,254 + Echvi_0469 0.15 +0.7 515,265 + Echvi_0469 0.15 +0.7 515,265 + Echvi_0469 0.15 +1.4 515,266 - Echvi_0469 0.15 -0.3 515,266 - Echvi_0469 0.15 +0.2 515,266 - Echvi_0469 0.15 +1.4 515,266 - Echvi_0469 0.15 +0.4 515,369 - Echvi_0469 0.18 -0.7 515,369 - Echvi_0469 0.18 +0.5 515,386 + Echvi_0469 0.19 -1.4 515,388 + Echvi_0469 0.19 -0.2 515,388 + Echvi_0469 0.19 -0.0 515,389 - Echvi_0469 0.19 +0.5 515,389 - Echvi_0469 0.19 -2.0 515,418 + Echvi_0469 0.20 -1.3 515,482 - Echvi_0469 0.22 -0.7 515,496 - Echvi_0469 0.23 +0.3 515,504 - Echvi_0469 0.23 +1.3 515,536 - Echvi_0469 0.24 +0.7
Or see this region's nucleotide sequence