Strain Fitness in Escherichia coli BW25113 around b2807

Experiment: 1-ethyl-3-methylimidazolium acetate 30 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 30 mM
2,938,353	-	ygdE	b2806	0.17	-0.4
2,938,353	-	ygdE	b2806	0.17	+1.2
2,938,398	-	ygdE	b2806	0.21	+1.1
2,938,443	+	ygdE	b2806	0.25	+1.6
2,938,443	-	ygdE	b2806	0.25	+0.6
2,938,553	+	ygdE	b2806	0.35	+0.1
2,938,561	-	ygdE	b2806	0.36	+0.7
2,938,561	-	ygdE	b2806	0.36	+0.2
2,938,587	+	ygdE	b2806	0.38	-0.9
2,938,610	+	ygdE	b2806	0.40	-0.4
2,938,698	+	ygdE	b2806	0.48	-0.6
2,938,711	-	ygdE	b2806	0.50	-0.0
2,938,711	-	ygdE	b2806	0.50	+0.7
2,938,750	-	ygdE	b2806	0.53	-1.0
2,938,758	+	ygdE	b2806	0.54	+0.2
2,938,780	-	ygdE	b2806	0.56	+1.0
2,938,780	-	ygdE	b2806	0.56	+0.5
2,938,795	-	ygdE	b2806	0.57	-0.6
2,938,795	-	ygdE	b2806	0.57	+0.8
2,938,810	+	ygdE	b2806	0.59	+0.4
2,938,810	+	ygdE	b2806	0.59	+0.6
2,938,868	-	ygdE	b2806	0.64	+1.0
2,938,883	-	ygdE	b2806	0.65	+0.4
2,938,969	+	ygdE	b2806	0.73	+0.1
2,938,974	+	ygdE	b2806	0.73	-0.3
2,938,974	+	ygdE	b2806	0.73	-0.6
2,938,986	+	ygdE	b2806	0.75	+0.2
2,939,038	-	ygdE	b2806	0.79	-0.6
2,939,298	-	ygdD	b2807	0.10	+1.0
2,939,347	+	ygdD	b2807	0.22	-1.0
2,939,405	+	ygdD	b2807	0.37	+1.2
2,939,442	-	ygdD	b2807	0.46	+1.5
2,939,465	-	ygdD	b2807	0.52	+0.8
2,939,470	+	ygdD	b2807	0.54	-0.5
2,939,470	+	ygdD	b2807	0.54	+1.2
2,939,545	+	ygdD	b2807	0.72	+2.6
2,939,553	-	ygdD	b2807	0.74	-0.3
2,939,648	+				+0.6
2,939,648	+				+0.4
2,939,655	+				+0.0
2,939,663	-				-0.6
2,939,663	-				+1.2
2,939,778	-	gcvA	b2808	0.12	+1.0
2,939,778	-	gcvA	b2808	0.12	-0.6
2,939,804	+	gcvA	b2808	0.14	+2.3
2,939,912	-	gcvA	b2808	0.26	+0.5
2,939,914	-	gcvA	b2808	0.26	+0.2
2,939,982	-	gcvA	b2808	0.34	+1.6
2,939,982	-	gcvA	b2808	0.34	-1.8
2,939,985	-	gcvA	b2808	0.34	-1.5
2,939,987	-	gcvA	b2808	0.34	+0.6
2,940,001	+	gcvA	b2808	0.36	-1.0
2,940,068	+	gcvA	b2808	0.43	+0.6
2,940,171	-	gcvA	b2808	0.54	+2.6
2,940,171	-	gcvA	b2808	0.54	-0.6
2,940,289	+	gcvA	b2808	0.67	-0.2
2,940,331	+	gcvA	b2808	0.72	-0.8
2,940,399	-	gcvA	b2808	0.79	-0.4
2,940,417	-	gcvA	b2808	0.81	-0.0
2,940,477	-	gcvA	b2808	0.88	+0.2
2,940,522	+				+0.8
2,940,587	-				+1.1