Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_27430 and PS417_27435 are separated by 512 nucleotides PS417_27435 and PS417_27440 are separated by 18 nucleotides
PS417_27430: PS417_27430 - hypothetical protein, at 5,918,597 to 5,919,832
_27430
PS417_27435: PS417_27435 - polyphosphate kinase, at 5,920,345 to 5,922,567
_27435
PS417_27440: PS417_27440 - delta-aminolevulinic acid dehydratase, at 5,922,586 to 5,923,599
_27440
Position (kb) 5920
5921
5922
5923 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5919.487 kb on - strand, within PS417_27430 at 5919.487 kb on - strand, within PS417_27430 at 5919.524 kb on + strand, within PS417_27430 at 5919.524 kb on + strand, within PS417_27430 at 5919.525 kb on - strand, within PS417_27430 at 5919.662 kb on + strand, within PS417_27430 at 5919.749 kb on - strand at 5919.813 kb on + strand at 5919.856 kb on - strand at 5919.878 kb on + strand at 5919.879 kb on - strand at 5919.955 kb on + strand at 5919.955 kb on + strand at 5920.009 kb on + strand at 5920.009 kb on + strand at 5920.009 kb on + strand at 5920.009 kb on + strand at 5920.009 kb on + strand at 5920.010 kb on - strand at 5920.010 kb on - strand at 5920.029 kb on + strand at 5920.029 kb on + strand at 5920.030 kb on - strand at 5920.249 kb on - strand at 5920.252 kb on - strand at 5920.629 kb on - strand, within PS417_27435 at 5920.770 kb on - strand, within PS417_27435 at 5921.040 kb on - strand, within PS417_27435 at 5921.044 kb on - strand, within PS417_27435 at 5921.621 kb on - strand, within PS417_27435 at 5921.812 kb on + strand, within PS417_27435 at 5921.812 kb on + strand, within PS417_27435 at 5921.813 kb on - strand, within PS417_27435 at 5921.813 kb on - strand, within PS417_27435 at 5921.816 kb on + strand, within PS417_27435 at 5921.816 kb on + strand, within PS417_27435 at 5921.817 kb on - strand, within PS417_27435 at 5922.399 kb on - strand at 5922.588 kb on - strand at 5922.630 kb on - strand at 5922.660 kb on + strand at 5922.753 kb on - strand, within PS417_27440 at 5922.753 kb on - strand, within PS417_27440 at 5922.753 kb on - strand, within PS417_27440 at 5922.807 kb on - strand, within PS417_27440 at 5922.862 kb on + strand, within PS417_27440 at 5922.863 kb on - strand, within PS417_27440 at 5922.863 kb on - strand, within PS417_27440 at 5922.863 kb on - strand, within PS417_27440 at 5922.968 kb on + strand, within PS417_27440 at 5922.968 kb on + strand, within PS417_27440 at 5922.969 kb on - strand, within PS417_27440 at 5922.969 kb on - strand, within PS417_27440 at 5922.971 kb on + strand, within PS417_27440 at 5922.972 kb on - strand, within PS417_27440 at 5922.983 kb on + strand, within PS417_27440 at 5922.983 kb on + strand, within PS417_27440 at 5922.984 kb on - strand, within PS417_27440 at 5923.160 kb on + strand, within PS417_27440 at 5923.505 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 5,919,487 - PS417_27430 0.72 -1.0 5,919,487 - PS417_27430 0.72 +1.1 5,919,524 + PS417_27430 0.75 -0.1 5,919,524 + PS417_27430 0.75 -0.1 5,919,525 - PS417_27430 0.75 -0.2 5,919,662 + PS417_27430 0.86 +1.0 5,919,749 - +0.2 5,919,813 + +0.6 5,919,856 - -0.7 5,919,878 + -0.8 5,919,879 - +0.0 5,919,955 + +0.5 5,919,955 + +0.7 5,920,009 + -0.2 5,920,009 + -1.3 5,920,009 + -0.9 5,920,009 + -1.4 5,920,009 + +0.7 5,920,010 - +0.3 5,920,010 - +0.1 5,920,029 + +0.8 5,920,029 + +0.3 5,920,030 - +0.8 5,920,249 - +0.3 5,920,252 - +1.9 5,920,629 - PS417_27435 0.13 -2.3 5,920,770 - PS417_27435 0.19 -1.5 5,921,040 - PS417_27435 0.31 -2.5 5,921,044 - PS417_27435 0.31 -2.2 5,921,621 - PS417_27435 0.57 -0.3 5,921,812 + PS417_27435 0.66 -2.7 5,921,812 + PS417_27435 0.66 -3.5 5,921,813 - PS417_27435 0.66 -1.1 5,921,813 - PS417_27435 0.66 -0.6 5,921,816 + PS417_27435 0.66 -3.3 5,921,816 + PS417_27435 0.66 -0.2 5,921,817 - PS417_27435 0.66 -3.0 5,922,399 - -3.0 5,922,588 - +0.4 5,922,630 - -0.0 5,922,660 + +0.0 5,922,753 - PS417_27440 0.16 +0.2 5,922,753 - PS417_27440 0.16 -0.3 5,922,753 - PS417_27440 0.16 +0.6 5,922,807 - PS417_27440 0.22 +0.1 5,922,862 + PS417_27440 0.27 +0.5 5,922,863 - PS417_27440 0.27 +0.4 5,922,863 - PS417_27440 0.27 +2.7 5,922,863 - PS417_27440 0.27 +0.2 5,922,968 + PS417_27440 0.38 -0.7 5,922,968 + PS417_27440 0.38 +0.7 5,922,969 - PS417_27440 0.38 +0.6 5,922,969 - PS417_27440 0.38 +0.9 5,922,971 + PS417_27440 0.38 +0.1 5,922,972 - PS417_27440 0.38 -1.1 5,922,983 + PS417_27440 0.39 +0.4 5,922,983 + PS417_27440 0.39 -0.0 5,922,984 - PS417_27440 0.39 +0.5 5,923,160 + PS417_27440 0.57 +0.5 5,923,505 - +0.1
Or see this region's nucleotide sequence