Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_26975 and PS417_26980 are separated by 120 nucleotides PS417_26980 and PS417_26985 are separated by 104 nucleotides PS417_26985 and PS417_26990 are separated by 22 nucleotides PS417_26990 and PS417_26995 are separated by 143 nucleotides
PS417_26975: PS417_26975 - membrane protein, at 5,826,070 to 5,826,852
_26975
PS417_26980: PS417_26980 - hypothetical protein, at 5,826,973 to 5,827,719
_26980
PS417_26985: PS417_26985 - phosphoenolpyruvate-protein phosphotransferase, at 5,827,824 to 5,830,103
_26985
PS417_26990: PS417_26990 - RNA pyrophosphohydrolase, at 5,830,126 to 5,830,605
_26990
PS417_26995: PS417_26995 - phosphoserine phosphatase, at 5,830,749 to 5,831,405
_26995
Position (kb) 5827
5828
5829
5830
5831 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 5826.836 kb on + strand at 5826.836 kb on + strand at 5826.837 kb on - strand at 5826.941 kb on - strand at 5827.048 kb on + strand, within PS417_26980 at 5827.100 kb on - strand, within PS417_26980 at 5827.265 kb on - strand, within PS417_26980 at 5827.297 kb on + strand, within PS417_26980 at 5827.345 kb on + strand, within PS417_26980 at 5827.345 kb on + strand, within PS417_26980 at 5827.345 kb on + strand at 5827.345 kb on + strand, within PS417_26980 at 5827.346 kb on - strand, within PS417_26980 at 5827.346 kb on - strand, within PS417_26980 at 5827.703 kb on + strand at 5827.704 kb on - strand at 5827.717 kb on + strand at 5827.736 kb on + strand at 5827.736 kb on + strand at 5828.164 kb on + strand, within PS417_26985 at 5828.323 kb on - strand, within PS417_26985 at 5828.470 kb on - strand, within PS417_26985 at 5828.591 kb on + strand, within PS417_26985 at 5828.591 kb on + strand, within PS417_26985 at 5828.867 kb on - strand, within PS417_26985 at 5828.965 kb on - strand, within PS417_26985 at 5828.965 kb on - strand, within PS417_26985 at 5829.811 kb on + strand, within PS417_26985 at 5829.983 kb on - strand at 5830.031 kb on + strand at 5830.095 kb on - strand at 5830.139 kb on - strand at 5830.221 kb on - strand, within PS417_26990 at 5830.455 kb on - strand, within PS417_26990 at 5830.676 kb on + strand at 5830.676 kb on + strand at 5830.676 kb on + strand at 5830.677 kb on - strand at 5830.681 kb on + strand at 5830.682 kb on - strand at 5830.682 kb on - strand at 5830.706 kb on + strand at 5830.706 kb on + strand at 5830.819 kb on - strand, within PS417_26995 at 5830.986 kb on + strand, within PS417_26995 at 5830.986 kb on + strand, within PS417_26995 at 5830.987 kb on - strand, within PS417_26995 at 5830.987 kb on - strand, within PS417_26995 at 5830.988 kb on + strand, within PS417_26995 at 5830.988 kb on + strand, within PS417_26995 at 5830.988 kb on + strand, within PS417_26995 at 5830.988 kb on + strand, within PS417_26995 at 5830.989 kb on - strand, within PS417_26995 at 5830.989 kb on - strand, within PS417_26995
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 5,826,836 + -0.8 5,826,836 + +1.1 5,826,837 - +0.7 5,826,941 - +0.7 5,827,048 + PS417_26980 0.10 +0.1 5,827,100 - PS417_26980 0.17 -0.5 5,827,265 - PS417_26980 0.39 +0.2 5,827,297 + PS417_26980 0.43 +0.4 5,827,345 + PS417_26980 0.50 +0.1 5,827,345 + PS417_26980 0.50 +1.7 5,827,345 + +1.1 5,827,345 + PS417_26980 0.50 -0.1 5,827,346 - PS417_26980 0.50 -0.3 5,827,346 - PS417_26980 0.50 +0.7 5,827,703 + +0.7 5,827,704 - +0.2 5,827,717 + -0.1 5,827,736 + -0.5 5,827,736 + +0.1 5,828,164 + PS417_26985 0.15 -0.5 5,828,323 - PS417_26985 0.22 -2.1 5,828,470 - PS417_26985 0.28 -4.2 5,828,591 + PS417_26985 0.34 -4.4 5,828,591 + PS417_26985 0.34 -3.7 5,828,867 - PS417_26985 0.46 +0.1 5,828,965 - PS417_26985 0.50 -2.6 5,828,965 - PS417_26985 0.50 -2.6 5,829,811 + PS417_26985 0.87 -1.2 5,829,983 - -0.9 5,830,031 + -2.3 5,830,095 - -3.8 5,830,139 - -2.8 5,830,221 - PS417_26990 0.20 -3.7 5,830,455 - PS417_26990 0.69 -2.1 5,830,676 + -0.4 5,830,676 + -0.7 5,830,676 + +0.1 5,830,677 - +0.4 5,830,681 + -0.3 5,830,682 - +0.5 5,830,682 - -0.1 5,830,706 + -0.3 5,830,706 + -0.5 5,830,819 - PS417_26995 0.11 -3.0 5,830,986 + PS417_26995 0.36 -2.8 5,830,986 + PS417_26995 0.36 -2.4 5,830,987 - PS417_26995 0.36 -3.9 5,830,987 - PS417_26995 0.36 -2.6 5,830,988 + PS417_26995 0.36 -3.3 5,830,988 + PS417_26995 0.36 -3.8 5,830,988 + PS417_26995 0.36 -1.5 5,830,988 + PS417_26995 0.36 -3.7 5,830,989 - PS417_26995 0.37 -0.9 5,830,989 - PS417_26995 0.37 -0.9
Or see this region's nucleotide sequence