Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_25715 and PS417_25720 are separated by 9 nucleotides PS417_25720 and PS417_25725 are separated by 10 nucleotides PS417_25725 and PS417_25730 are separated by 70 nucleotides PS417_25730 and PS417_25735 overlap by 4 nucleotides
PS417_25715: PS417_25715 - anthranilate phosphoribosyltransferase, at 5,551,575 to 5,552,624
_25715
PS417_25720: PS417_25720 - anthranilate synthase component II, at 5,552,634 to 5,553,227
_25720
PS417_25725: PS417_25725 - anthranilate synthase component I, at 5,553,238 to 5,554,719
_25725
PS417_25730: PS417_25730 - phosphoglycolate phosphatase, at 5,554,790 to 5,555,608
_25730
PS417_25735: PS417_25735 - ribulose-phosphate 3-epimerase, at 5,555,605 to 5,556,279
_25735
Position (kb) 5553
5554
5555 Strain fitness (log2 ratio) -7
-6
-5
-4
-3
-2
-1
0
1
2 at 5552.892 kb on + strand, within PS417_25720 at 5552.893 kb on - strand, within PS417_25720 at 5552.893 kb on - strand, within PS417_25720 at 5552.949 kb on + strand, within PS417_25720 at 5552.949 kb on + strand, within PS417_25720 at 5552.949 kb on + strand, within PS417_25720 at 5552.950 kb on - strand, within PS417_25720 at 5553.025 kb on + strand, within PS417_25720 at 5553.176 kb on - strand at 5553.176 kb on - strand at 5553.190 kb on + strand at 5553.194 kb on + strand at 5553.194 kb on + strand at 5553.194 kb on + strand at 5553.195 kb on - strand at 5553.195 kb on - strand at 5553.206 kb on - strand at 5553.206 kb on - strand at 5553.391 kb on - strand, within PS417_25725 at 5553.434 kb on + strand, within PS417_25725 at 5553.893 kb on + strand, within PS417_25725 at 5553.893 kb on + strand, within PS417_25725 at 5553.893 kb on + strand, within PS417_25725 at 5553.894 kb on - strand, within PS417_25725 at 5553.894 kb on - strand, within PS417_25725 at 5553.894 kb on - strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.899 kb on + strand, within PS417_25725 at 5553.900 kb on - strand, within PS417_25725 at 5553.900 kb on - strand, within PS417_25725 at 5554.011 kb on + strand, within PS417_25725 at 5554.011 kb on + strand, within PS417_25725 at 5554.011 kb on + strand, within PS417_25725 at 5554.013 kb on + strand, within PS417_25725 at 5554.013 kb on + strand, within PS417_25725 at 5554.014 kb on - strand, within PS417_25725 at 5554.014 kb on - strand, within PS417_25725 at 5554.014 kb on - strand, within PS417_25725 at 5554.014 kb on - strand, within PS417_25725 at 5554.043 kb on + strand, within PS417_25725 at 5554.044 kb on - strand, within PS417_25725 at 5554.044 kb on - strand, within PS417_25725 at 5554.057 kb on - strand, within PS417_25725 at 5554.243 kb on + strand, within PS417_25725 at 5554.355 kb on + strand, within PS417_25725 at 5554.355 kb on + strand, within PS417_25725 at 5554.356 kb on - strand, within PS417_25725 at 5554.409 kb on + strand, within PS417_25725 at 5554.409 kb on + strand, within PS417_25725 at 5554.410 kb on - strand at 5554.508 kb on - strand, within PS417_25725 at 5554.597 kb on - strand at 5554.680 kb on - strand at 5554.723 kb on - strand at 5554.744 kb on + strand at 5554.755 kb on + strand at 5554.901 kb on + strand, within PS417_25730 at 5554.902 kb on - strand, within PS417_25730 at 5554.998 kb on + strand, within PS417_25730 at 5554.999 kb on - strand, within PS417_25730 at 5555.004 kb on + strand, within PS417_25730 at 5555.015 kb on + strand, within PS417_25730 at 5555.015 kb on + strand, within PS417_25730 at 5555.015 kb on + strand, within PS417_25730 at 5555.095 kb on + strand, within PS417_25730 at 5555.181 kb on + strand, within PS417_25730
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 5,552,892 + PS417_25720 0.43 -1.9 5,552,893 - PS417_25720 0.44 -3.9 5,552,893 - PS417_25720 0.44 -4.3 5,552,949 + PS417_25720 0.53 -5.3 5,552,949 + PS417_25720 0.53 -3.6 5,552,949 + PS417_25720 0.53 -1.2 5,552,950 - PS417_25720 0.53 -3.5 5,553,025 + PS417_25720 0.66 -4.8 5,553,176 - -0.0 5,553,176 - -2.9 5,553,190 + -4.6 5,553,194 + -0.4 5,553,194 + -0.8 5,553,194 + -5.9 5,553,195 - -0.4 5,553,195 - -3.8 5,553,206 - -1.9 5,553,206 - -4.0 5,553,391 - PS417_25725 0.10 -2.4 5,553,434 + PS417_25725 0.13 -5.4 5,553,893 + PS417_25725 0.44 -2.9 5,553,893 + PS417_25725 0.44 -4.5 5,553,893 + PS417_25725 0.44 -5.7 5,553,894 - PS417_25725 0.44 -4.4 5,553,894 - PS417_25725 0.44 -2.2 5,553,894 - PS417_25725 0.44 -3.9 5,553,899 + PS417_25725 0.45 -0.3 5,553,899 + PS417_25725 0.45 -6.3 5,553,899 + PS417_25725 0.45 -4.4 5,553,899 + PS417_25725 0.45 -6.9 5,553,899 + PS417_25725 0.45 -4.7 5,553,900 - PS417_25725 0.45 -3.6 5,553,900 - PS417_25725 0.45 -2.4 5,554,011 + PS417_25725 0.52 -3.2 5,554,011 + PS417_25725 0.52 -3.4 5,554,011 + PS417_25725 0.52 -0.8 5,554,013 + PS417_25725 0.52 -2.7 5,554,013 + PS417_25725 0.52 -3.2 5,554,014 - PS417_25725 0.52 -2.6 5,554,014 - PS417_25725 0.52 -1.9 5,554,014 - PS417_25725 0.52 -3.9 5,554,014 - PS417_25725 0.52 -5.5 5,554,043 + PS417_25725 0.54 -4.8 5,554,044 - PS417_25725 0.54 -3.5 5,554,044 - PS417_25725 0.54 -3.2 5,554,057 - PS417_25725 0.55 -3.6 5,554,243 + PS417_25725 0.68 -0.9 5,554,355 + PS417_25725 0.75 -2.5 5,554,355 + PS417_25725 0.75 -2.2 5,554,356 - PS417_25725 0.75 -2.1 5,554,409 + PS417_25725 0.79 -3.9 5,554,409 + PS417_25725 0.79 -2.8 5,554,410 - +0.6 5,554,508 - PS417_25725 0.86 -2.7 5,554,597 - -3.6 5,554,680 - -0.4 5,554,723 - -3.0 5,554,744 + -1.2 5,554,755 + -4.6 5,554,901 + PS417_25730 0.14 -2.9 5,554,902 - PS417_25730 0.14 -0.4 5,554,998 + PS417_25730 0.25 -0.3 5,554,999 - PS417_25730 0.26 +0.4 5,555,004 + PS417_25730 0.26 -0.8 5,555,015 + PS417_25730 0.27 -0.4 5,555,015 + PS417_25730 0.27 +0.4 5,555,015 + PS417_25730 0.27 +1.8 5,555,095 + PS417_25730 0.37 -0.2 5,555,181 + PS417_25730 0.48 -0.3
Or see this region's nucleotide sequence