Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_24105 and PS417_24110 are separated by 69 nucleotides PS417_24110 and PS417_24115 are separated by 151 nucleotides
PS417_24105: PS417_24105 - D-lactate transporter (lctP family) (from data) , at 5,218,053 to 5,219,747
_24105
PS417_24110: PS417_24110 - 4Fe-4S ferredoxin, at 5,219,817 to 5,222,627
_24110
PS417_24115: PS417_24115 - hypothetical protein, at 5,222,779 to 5,223,057
_24115
Position (kb)
5219
5220
5221
5222
5223 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5219.020 kb on + strand, within PS417_24105 at 5219.030 kb on + strand, within PS417_24105 at 5219.031 kb on - strand, within PS417_24105 at 5219.082 kb on + strand, within PS417_24105 at 5219.082 kb on + strand, within PS417_24105 at 5219.082 kb on + strand, within PS417_24105 at 5219.083 kb on - strand, within PS417_24105 at 5219.083 kb on - strand, within PS417_24105 at 5219.083 kb on - strand, within PS417_24105 at 5219.083 kb on - strand, within PS417_24105 at 5219.274 kb on - strand, within PS417_24105 at 5219.274 kb on - strand, within PS417_24105 at 5219.274 kb on - strand, within PS417_24105 at 5219.282 kb on - strand, within PS417_24105 at 5219.296 kb on - strand, within PS417_24105 at 5219.296 kb on - strand, within PS417_24105 at 5219.358 kb on + strand, within PS417_24105 at 5219.359 kb on - strand, within PS417_24105 at 5219.657 kb on + strand at 5219.658 kb on - strand at 5219.746 kb on - strand at 5219.746 kb on - strand at 5219.758 kb on + strand at 5219.758 kb on + strand at 5219.759 kb on - strand at 5219.759 kb on - strand at 5219.759 kb on - strand at 5219.759 kb on - strand at 5219.759 kb on - strand at 5219.761 kb on + strand at 5219.766 kb on + strand at 5219.801 kb on + strand at 5219.801 kb on + strand at 5219.802 kb on - strand at 5220.011 kb on - strand at 5220.011 kb on - strand at 5220.468 kb on + strand, within PS417_24110 at 5220.594 kb on + strand, within PS417_24110 at 5220.594 kb on + strand, within PS417_24110 at 5220.607 kb on + strand, within PS417_24110 at 5220.607 kb on + strand, within PS417_24110 at 5220.608 kb on - strand, within PS417_24110 at 5220.608 kb on - strand, within PS417_24110 at 5221.170 kb on + strand, within PS417_24110 at 5221.430 kb on + strand, within PS417_24110 at 5221.431 kb on - strand, within PS417_24110 at 5221.573 kb on - strand, within PS417_24110 at 5221.573 kb on - strand, within PS417_24110 at 5221.667 kb on - strand, within PS417_24110 at 5221.929 kb on + strand, within PS417_24110 at 5221.929 kb on + strand, within PS417_24110 at 5221.929 kb on + strand, within PS417_24110 at 5222.098 kb on - strand, within PS417_24110 at 5222.118 kb on - strand, within PS417_24110 at 5222.236 kb on + strand, within PS417_24110 at 5222.236 kb on + strand, within PS417_24110 at 5222.236 kb on + strand, within PS417_24110 at 5222.245 kb on - strand, within PS417_24110 at 5222.519 kb on + strand at 5222.519 kb on + strand at 5222.590 kb on - strand at 5222.590 kb on - strand at 5222.689 kb on + strand at 5222.689 kb on + strand at 5222.690 kb on - strand at 5222.774 kb on - strand at 5222.774 kb on - strand at 5222.778 kb on + strand at 5222.779 kb on - strand at 5222.779 kb on - strand at 5222.779 kb on - strand at 5222.896 kb on - strand, within PS417_24115 at 5222.939 kb on + strand, within PS417_24115 at 5223.570 kb on - strand at 5223.570 kb on - strand at 5223.570 kb on - strand at 5223.602 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 5,219,020 + PS417_24105 0.57 -0.2 5,219,030 + PS417_24105 0.58 +1.4 5,219,031 - PS417_24105 0.58 +0.4 5,219,082 + PS417_24105 0.61 -1.0 5,219,082 + PS417_24105 0.61 -0.4 5,219,082 + PS417_24105 0.61 -0.9 5,219,083 - PS417_24105 0.61 -0.4 5,219,083 - PS417_24105 0.61 -0.3 5,219,083 - PS417_24105 0.61 -0.4 5,219,083 - PS417_24105 0.61 +0.2 5,219,274 - PS417_24105 0.72 -0.5 5,219,274 - PS417_24105 0.72 -0.2 5,219,274 - PS417_24105 0.72 +0.1 5,219,282 - PS417_24105 0.73 -0.0 5,219,296 - PS417_24105 0.73 +0.1 5,219,296 - PS417_24105 0.73 -0.5 5,219,358 + PS417_24105 0.77 -0.2 5,219,359 - PS417_24105 0.77 +0.1 5,219,657 + -0.1 5,219,658 - +1.8 5,219,746 - -0.5 5,219,746 - -0.9 5,219,758 + -0.9 5,219,758 + +0.1 5,219,759 - -0.0 5,219,759 - -0.2 5,219,759 - +0.4 5,219,759 - -0.8 5,219,759 - -0.6 5,219,761 + -0.0 5,219,766 + +0.3 5,219,801 + -0.0 5,219,801 + +0.0 5,219,802 - -0.2 5,220,011 - +0.4 5,220,011 - -0.8 5,220,468 + PS417_24110 0.23 +1.1 5,220,594 + PS417_24110 0.28 -1.5 5,220,594 + PS417_24110 0.28 +0.7 5,220,607 + PS417_24110 0.28 -0.3 5,220,607 + PS417_24110 0.28 -0.4 5,220,608 - PS417_24110 0.28 -0.3 5,220,608 - PS417_24110 0.28 +1.8 5,221,170 + PS417_24110 0.48 -0.5 5,221,430 + PS417_24110 0.57 +0.2 5,221,431 - PS417_24110 0.57 +0.0 5,221,573 - PS417_24110 0.62 -0.9 5,221,573 - PS417_24110 0.62 -1.1 5,221,667 - PS417_24110 0.66 +1.0 5,221,929 + PS417_24110 0.75 -0.1 5,221,929 + PS417_24110 0.75 -0.2 5,221,929 + PS417_24110 0.75 -0.5 5,222,098 - PS417_24110 0.81 -0.0 5,222,118 - PS417_24110 0.82 +0.5 5,222,236 + PS417_24110 0.86 +0.0 5,222,236 + PS417_24110 0.86 +1.8 5,222,236 + PS417_24110 0.86 +0.8 5,222,245 - PS417_24110 0.86 +0.1 5,222,519 + +0.0 5,222,519 + -0.4 5,222,590 - +2.4 5,222,590 - -0.4 5,222,689 + +1.0 5,222,689 + +0.3 5,222,690 - -2.1 5,222,774 - -1.2 5,222,774 - +1.4 5,222,778 + +0.0 5,222,779 - -0.9 5,222,779 - +0.2 5,222,779 - -0.1 5,222,896 - PS417_24115 0.42 -0.6 5,222,939 + PS417_24115 0.57 +0.7 5,223,570 - -0.2 5,223,570 - +0.2 5,223,570 - +0.1 5,223,602 + -0.5
Or see this region's nucleotide sequence