Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_23305 and PS417_23310 are separated by 42 nucleotides PS417_23310 and PS417_23315 are separated by 209 nucleotides PS417_23315 and PS417_23320 are separated by 195 nucleotides PS417_23320 and PS417_23325 overlap by 4 nucleotides
PS417_23305: PS417_23305 - cytochrome C, at 5,045,167 to 5,045,544
_23305
PS417_23310: PS417_23310 - glyoxalase, at 5,045,587 to 5,046,018
_23310
PS417_23315: PS417_23315 - transcriptional regulator, at 5,046,228 to 5,046,608
_23315
PS417_23320: PS417_23320 - heme oxygenase, at 5,046,804 to 5,047,418
_23320
PS417_23325: PS417_23325 - histidine kinase, at 5,047,415 to 5,049,658
_23325
Position (kb) 5046
5047 Strain fitness (log2 ratio) -1
0
1 at 5045.261 kb on - strand, within PS417_23305 at 5045.282 kb on + strand, within PS417_23305 at 5045.283 kb on - strand, within PS417_23305 at 5045.346 kb on - strand, within PS417_23305 at 5045.346 kb on - strand, within PS417_23305 at 5045.448 kb on + strand, within PS417_23305 at 5045.455 kb on + strand, within PS417_23305 at 5045.456 kb on - strand, within PS417_23305 at 5045.588 kb on + strand at 5045.588 kb on + strand at 5045.589 kb on - strand at 5045.589 kb on - strand at 5045.598 kb on + strand at 5045.598 kb on + strand at 5045.598 kb on + strand at 5045.599 kb on - strand at 5045.855 kb on + strand, within PS417_23310 at 5045.856 kb on - strand, within PS417_23310 at 5045.856 kb on - strand, within PS417_23310 at 5045.856 kb on - strand, within PS417_23310 at 5046.018 kb on + strand at 5046.019 kb on - strand at 5046.019 kb on - strand at 5046.019 kb on - strand at 5046.136 kb on + strand at 5046.137 kb on - strand at 5046.137 kb on - strand at 5046.137 kb on - strand at 5046.189 kb on + strand at 5046.189 kb on + strand at 5046.200 kb on + strand at 5046.200 kb on + strand at 5046.200 kb on + strand at 5046.200 kb on + strand at 5046.200 kb on + strand at 5046.201 kb on - strand at 5046.351 kb on + strand, within PS417_23315 at 5046.489 kb on - strand, within PS417_23315 at 5046.719 kb on - strand at 5046.723 kb on + strand at 5046.724 kb on - strand at 5046.741 kb on - strand at 5046.741 kb on - strand at 5046.933 kb on + strand, within PS417_23320 at 5046.934 kb on - strand, within PS417_23320 at 5046.955 kb on - strand, within PS417_23320 at 5046.955 kb on - strand, within PS417_23320 at 5046.958 kb on - strand, within PS417_23320 at 5046.958 kb on - strand, within PS417_23320 at 5046.958 kb on - strand, within PS417_23320 at 5047.161 kb on + strand, within PS417_23320 at 5047.161 kb on + strand, within PS417_23320 at 5047.161 kb on + strand, within PS417_23320 at 5047.161 kb on + strand, within PS417_23320 at 5047.161 kb on + strand, within PS417_23320 at 5047.161 kb on + strand, within PS417_23320 at 5047.161 kb on + strand, within PS417_23320 at 5047.259 kb on + strand, within PS417_23320 at 5047.263 kb on + strand, within PS417_23320 at 5047.264 kb on - strand, within PS417_23320 at 5047.264 kb on - strand, within PS417_23320 at 5047.408 kb on + strand at 5047.408 kb on + strand at 5047.409 kb on - strand at 5047.409 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 5,045,261 - PS417_23305 0.25 -1.1 5,045,282 + PS417_23305 0.30 -0.4 5,045,283 - PS417_23305 0.31 -0.1 5,045,346 - PS417_23305 0.47 -0.5 5,045,346 - PS417_23305 0.47 +0.1 5,045,448 + PS417_23305 0.74 +0.2 5,045,455 + PS417_23305 0.76 +0.6 5,045,456 - PS417_23305 0.76 -0.7 5,045,588 + +0.7 5,045,588 + +0.1 5,045,589 - +0.0 5,045,589 - +0.5 5,045,598 + +0.1 5,045,598 + -0.3 5,045,598 + +0.3 5,045,599 - -1.1 5,045,855 + PS417_23310 0.62 +0.2 5,045,856 - PS417_23310 0.62 +0.5 5,045,856 - PS417_23310 0.62 -1.2 5,045,856 - PS417_23310 0.62 -1.3 5,046,018 + +0.5 5,046,019 - +0.3 5,046,019 - -0.1 5,046,019 - -1.3 5,046,136 + +0.0 5,046,137 - +0.6 5,046,137 - -0.3 5,046,137 - -0.5 5,046,189 + -0.1 5,046,189 + +0.4 5,046,200 + +1.1 5,046,200 + -0.6 5,046,200 + +1.3 5,046,200 + +0.4 5,046,200 + -0.3 5,046,201 - -1.0 5,046,351 + PS417_23315 0.32 -0.8 5,046,489 - PS417_23315 0.69 -1.3 5,046,719 - -0.3 5,046,723 + +1.1 5,046,724 - -0.0 5,046,741 - +0.4 5,046,741 - -0.7 5,046,933 + PS417_23320 0.21 +0.1 5,046,934 - PS417_23320 0.21 -0.0 5,046,955 - PS417_23320 0.25 +0.9 5,046,955 - PS417_23320 0.25 -0.7 5,046,958 - PS417_23320 0.25 +0.5 5,046,958 - PS417_23320 0.25 -0.2 5,046,958 - PS417_23320 0.25 +0.0 5,047,161 + PS417_23320 0.58 -0.1 5,047,161 + PS417_23320 0.58 -0.0 5,047,161 + PS417_23320 0.58 -0.4 5,047,161 + PS417_23320 0.58 -0.3 5,047,161 + PS417_23320 0.58 -0.0 5,047,161 + PS417_23320 0.58 +0.3 5,047,161 + PS417_23320 0.58 -0.1 5,047,259 + PS417_23320 0.74 -0.7 5,047,263 + PS417_23320 0.75 -0.5 5,047,264 - PS417_23320 0.75 +0.1 5,047,264 - PS417_23320 0.75 -0.0 5,047,408 + -0.4 5,047,408 + +0.7 5,047,409 - -0.3 5,047,409 - +0.3
Or see this region's nucleotide sequence