Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_22435 and PS417_22440 are separated by 1 nucleotides PS417_22440 and PS417_22445 are separated by 139 nucleotides PS417_22445 and PS417_22450 are separated by 0 nucleotides PS417_22450 and PS417_22455 are separated by 67 nucleotides
PS417_22435: PS417_22435 - protein tolQ, at 4,859,438 to 4,860,133
_22435
PS417_22440: PS417_22440 - 4-hydroxybenzoyl-CoA thioesterase, at 4,860,135 to 4,860,590
_22440
PS417_22445: PS417_22445 - ATP-dependent DNA helicase RuvB, at 4,860,730 to 4,861,788
_22445
PS417_22450: PS417_22450 - ATP-dependent DNA helicase RuvA, at 4,861,789 to 4,862,400
_22450
PS417_22455: PS417_22455 - crossover junction endodeoxyribonuclease RuvC, at 4,862,468 to 4,862,992
_22455
Position (kb) 4860
4861
4862 Strain fitness (log2 ratio) -1
0
1
2 at 4860.193 kb on - strand, within PS417_22440 at 4860.591 kb on - strand at 4860.591 kb on - strand at 4860.603 kb on - strand at 4860.703 kb on + strand at 4860.708 kb on + strand at 4860.709 kb on - strand at 4861.122 kb on + strand, within PS417_22445 at 4861.233 kb on + strand, within PS417_22445 at 4861.243 kb on + strand, within PS417_22445 at 4861.452 kb on + strand, within PS417_22445 at 4861.694 kb on + strand at 4862.220 kb on - strand, within PS417_22450 at 4862.220 kb on - strand, within PS417_22450 at 4862.324 kb on + strand, within PS417_22450 at 4862.466 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 4,860,193 - PS417_22440 0.13 +0.6 4,860,591 - -1.0 4,860,591 - -0.7 4,860,603 - +0.3 4,860,703 + -1.0 4,860,708 + +0.5 4,860,709 - +2.3 4,861,122 + PS417_22445 0.37 -0.9 4,861,233 + PS417_22445 0.47 -0.0 4,861,243 + PS417_22445 0.48 -1.6 4,861,452 + PS417_22445 0.68 -1.5 4,861,694 + -1.0 4,862,220 - PS417_22450 0.70 +0.3 4,862,220 - PS417_22450 0.70 -0.7 4,862,324 + PS417_22450 0.87 -1.3 4,862,466 + +0.3
Or see this region's nucleotide sequence