Experiment: Gly-Glu (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PS417_21720 and PS417_21725 are separated by 246 nucleotides PS417_21725 and PS417_21730 are separated by 27 nucleotides
PS417_21720: PS417_21720 - AraC family transcriptional regulator, at 4,716,981 to 4,717,961
_21720
PS417_21725: PS417_21725 - amino acid transporter, at 4,718,208 to 4,718,972
_21725
PS417_21730: PS417_21730 - peptidase M14, at 4,719,000 to 4,720,112
_21730
Position (kb) 4718
4719 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 4717.983 kb on - strand at 4717.988 kb on - strand at 4718.094 kb on - strand at 4718.101 kb on + strand at 4718.181 kb on + strand at 4718.182 kb on - strand at 4718.182 kb on - strand at 4718.209 kb on + strand at 4718.525 kb on + strand, within PS417_21725 at 4718.525 kb on + strand, within PS417_21725 at 4718.526 kb on - strand, within PS417_21725 at 4718.526 kb on - strand, within PS417_21725 at 4718.526 kb on - strand, within PS417_21725 at 4718.546 kb on + strand, within PS417_21725 at 4718.547 kb on - strand, within PS417_21725 at 4718.942 kb on + strand at 4718.968 kb on + strand at 4718.969 kb on - strand at 4719.200 kb on + strand, within PS417_21730 at 4719.201 kb on - strand, within PS417_21730 at 4719.209 kb on - strand, within PS417_21730 at 4719.209 kb on - strand, within PS417_21730 at 4719.401 kb on + strand, within PS417_21730 at 4719.580 kb on + strand, within PS417_21730 at 4719.580 kb on + strand, within PS417_21730 at 4719.580 kb on + strand, within PS417_21730 at 4719.581 kb on - strand, within PS417_21730 at 4719.581 kb on - strand, within PS417_21730
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-Glu (C) remove 4,717,983 - +2.9 4,717,988 - +2.5 4,718,094 - +4.2 4,718,101 + -2.8 4,718,181 + -2.2 4,718,182 - +3.4 4,718,182 - +3.6 4,718,209 + -1.4 4,718,525 + PS417_21725 0.41 -0.4 4,718,525 + PS417_21725 0.41 -0.7 4,718,526 - PS417_21725 0.42 +2.9 4,718,526 - PS417_21725 0.42 +2.4 4,718,526 - PS417_21725 0.42 +3.9 4,718,546 + PS417_21725 0.44 -0.6 4,718,547 - PS417_21725 0.44 +3.3 4,718,942 + -0.3 4,718,968 + -0.1 4,718,969 - -0.4 4,719,200 + PS417_21730 0.18 -0.8 4,719,201 - PS417_21730 0.18 +2.9 4,719,209 - PS417_21730 0.19 +3.4 4,719,209 - PS417_21730 0.19 +2.9 4,719,401 + PS417_21730 0.36 -0.2 4,719,580 + PS417_21730 0.52 -0.6 4,719,580 + PS417_21730 0.52 -0.4 4,719,580 + PS417_21730 0.52 -0.9 4,719,581 - PS417_21730 0.52 +1.4 4,719,581 - PS417_21730 0.52 +0.8
Or see this region's nucleotide sequence